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Pfam Domains mapped on to the structure: 1K46

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF09013 YopH, N-terminal PF09013 PF09013

Gene Ontology Annotations: 1K46

No. GO ID GO Description Linkout - AmiGO
1 GO:0009405 pathogenesis GO:0009405

Conserved Domain Database Superfamily Annotations: 1K46

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1K46 204116 cl07574 YopH_N superfamily - -
Structural Details of PDB entry 1K46

Structural Details of PDB entry 1K46

PDBid Chains Hinge Swapped Domain
1K46 A,B A:27-31,B:27-31 A:2-26,B:2-26

Swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 5, 6, 7, 8, 9, 11, 12, 13, 15, 16, 20, 21, 22, 23, 24, 25, 26, 28, 29, 31, 32, 33, 34, 35, 39, 51, 52, 55, 58, 62, 108, 109, 110, 111, 114, 117,
B 2, 3, 5, 6, 7, 8, 9, 11, 12, 13, 15, 16, 20, 21, 22, 23, 24, 25, 26, 28, 29, 31, 32, 33, 34, 35, 39, 51, 52, 55, 58, 62, 108, 109, 110, 111, 114, 117,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 27, 30, 54, 61, 82, 83, 118, 120, 121, 124, 125,
B 27, 30, 54, 61, 82, 83, 118, 120, 121, 124,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1K46 B:1K46

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1K46.ali
atm file:1K46.atm
cof file:1K46.cof
hbd file:1K46.hbd
html file:1K46.html
pdb file:1K46.pdb
ps file:1K46.ps
psa file:1K46.psa
rtf file:1K46.rtf
sst file:1K46.sst
tem file:1K46.tem