3DSwap | Knowledgebase of 3D Domain Swapping in Proteins

Pfam Domains mapped on to the structure: 1JUO

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD

1 A PF13833 EF-hand domain pair PF13833 PF13833

2 A PF13202 EF hand PF13202 PF13202

3 A PF13202 EF hand PF13202 PF13202

4 A PF13499 EF-hand domain pair PF13499 PF13499

Conserved Domain Database Superfamily Annotations: 1JUO

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD

1 1JUO 28933 cd00051 EFh - cl08302

2 1JUO 208857 cl08302 EFh superfamily - -

3 1JUO 28933 cd00051 EFh - cl08302

4 1JUO 208857 cl08302 EFh superfamily - -

5 1JUO 28933 cd00051 EFh - cl08302

6 1JUO 208857 cl08302 EFh superfamily - -

7 1JUO 208857 cl08302 EFh superfamily - -

8 1JUO 208857 cl08302 EFh superfamily - -

Structural Details of PDB entry 1JUO

Structural Details of PDB entry 1JUO

PDBid Chains Hinge Swapped Domain

1JUO A,B A:176-180,B:176-180 A:181-196,B:181-196

Swapped-domain interface residues and interactions:

Chains Residues
A 136, 137, 140, 143, 144, 182, 183, 184, 185, 186, 187, 188, 189, 191, 192, 193, 195, 196,

B 136, 137, 139, 140, 143, 144, 182, 183, 184, 185, 186, 187, 188, 189, 191, 192, 193, 195, 196,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 50, 73, 76, 86, 87, 88, 135, 139, 147, 165, 166, 169, 170, 173, 197, 198,

B 73, 76, 146, 147, 148, 150, 151, 158, 165, 166, 169, 170, 173, 197,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain

A No mutation No mutation No mutation No mutation

B No mutation No mutation No mutation No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1JUO B:1JUO

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file: 1JUO.ali
atm file: 1JUO.atm
cof file: 1JUO.cof
hbd file: 1JUO.hbd
html file: 1JUO.html
pdb file: 1JUO.pdb
ps file: 1JUO.ps
psa file: 1JUO.psa
rtf file: 1JUO.rtf
sst file: 1JUO.sst
tem file: 1JUO.tem