Pfam Domains mapped on to the structure: 1JS9

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF01318	Bromovirus coat protein	PF01318	PF01318

Gene Ontology Annotations: 1JS9

No.	GO ID	GO Description	Linkout - AmiGO
1	GO:0019028	viral capsid	GO:0019028

Conserved Domain Database Superfamily Annotations: 1JS9

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1JS9	144788	cl03163	Bromo_coat	superfamily - -

Structural Details of PDB entry 1JS9 PDBid Chains Hinge Swapped Domain 1JS9 A,C,B A:176-179,C:176-179,B:176-179 A:180-189,C:180-189,B:180-189 Swapped-domain interface residues and interactions: Chains Residues Non-swapped-domain interface residues and interactions: Chains Residues

Swapped domains are represented using trasperent spheres. Non-swapped part is reprented using light color and cartoon reprentation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
C	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

0:1JS9

3:1JS9

A:1JS9

B:1JS9

C:1JS9

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1JS9.ali
atm file:	1JS9.atm
pdb file:	1JS9.pdb
psa file:	1JS9.psa
sst file:	1JS9.sst