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Pfam Domains mapped on to the structure: 1JML

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF02246 Protein L b1 domain PF02246 PF02246

Conserved Domain Database Superfamily Annotations: 1JML

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1JML 202173 cl08344 B1 superfamily - -
Structural Details of PDB entry 1JML

Structural Details of PDB entry 1JML

PDBid Chains Hinge Swapped Domain
1JML A,B A:51-56,B:51-56 A:57-64,B:57-64

Swapped-domain interface residues and interactions:

Chains Residues
A 6, 7, 8, 9, 10, 11, 12, 13, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 57, 58, 59, 60, 61, 62, 63, 64,
B 6, 7, 8, 9, 10, 11, 12, 13, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 57, 58, 59, 60, 61, 62, 63,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 2, 3, 4, 5, 26, 33, 37, 55, 56,
B 2, 3, 4, 5, 26, 33, 37, 55, 56,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1JML B:1JML

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1JML.ali
atm file:1JML.atm
cof file:1JML.cof
hbd file:1JML.hbd
html file:1JML.html
pdb file:1JML.pdb
ps file:1JML.ps
psa file:1JML.psa
rtf file:1JML.rtf
sst file:1JML.sst
tem file:1JML.tem