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Pfam Domains mapped on to the structure: 1J35

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00059 Lectin C-type domain PF00059 PF00059
2 B PF00059 Lectin C-type domain PF00059 PF00059
3 C PF00594 Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain PF00594 PF00594

Conserved Domain Database Superfamily Annotations: 1J35

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1J35 141428 Gla superfamily N -
Structural Details of PDB entry 1J35

Structural Details of PDB entry 1J35

PDBid Chains Hinge Swapped Domain
1J35 A,B A:70-81,B:268-277 A:82-129,B:278-323

Swapped-domain interface residues and interactions:

Chains Residues
A 38, 41, 43, 44, 69, 70, 71, 72, 73, 82, 83, 84, 85, 87, 89, 91, 92, 93, 94, 95, 98, 100, 101, 103, 112, 113, 114, 115, 116, 129,
B 238, 241, 243, 244, 267, 268, 278, 279, 280, 281, 283, 285, 287, 289, 290, 291, 295, 297, 304, 305, 306, 307, 308,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 27, 42, 45, 48, 74, 77, 78, 79, 80, 81,
B 227, 242, 245, 269, 271, 272, 274, 275, 276, 277,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1J35 B:1J35

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1J35.ali
atm file:1J35.atm
cof file:1J35.cof
hbd file:1J35.hbd
html file:1J35.html
pdb file:1J35.pdb
ps file:1J35.ps
psa file:1J35.psa
rtf file:1J35.rtf
sst file:1J35.sst
tem file:1J35.tem