Pfam Domains mapped on to the structure: 1H2D

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF07447	Matrix protein VP40	PF07447	PF07447

Conserved Domain Database Superfamily Annotations: 1H2D

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1H2D	116068	VP40	superfamily	C -

Structural Details of PDB entry 1H2D PDBid Chains Hinge Swapped Domain 1H2D A,B A:95-96,B:95-96 A:69-94,B:69-94 Swapped-domain interface residues and interactions: Chains Residues A 70, 72, 74, 76, 78, 91, 93, 164, 187, 189, 190, B 69, 70, 72, 74, 76, 90, 91, 92, 93, 187, 188, 189, 190, Non-swapped-domain interface residues and interactions: Chains Residues A 95, 97, 99, 100, 102, 104, 130, 146, 148, 151, 155, 158, 160, 161, 165, 178, 180, 182, 184, 186, B 95, 97, 99, 100, 102, 104, 146, 148, 151, 155, 158, 160, 161, 164, 165, 182, 184, 186, 191,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1H2D

B:1H2D

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1H2D.ali
atm file:	1H2D.atm
cof file:	1H2D.cof
hbd file:	1H2D.hbd
html file:	1H2D.html
pdb file:	1H2D.pdb
ps file:	1H2D.ps
psa file:	1H2D.psa
rtf file:	1H2D.rtf
sst file:	1H2D.sst
tem file:	1H2D.tem