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Pfam Domains mapped on to the structure: 1GT1

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00061 Lipocalin / cytosolic fatty-acid binding protein family PF00061 PF00061

Conserved Domain Database Superfamily Annotations: 1GT1

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1GT1 207329 cl01150 Lipocalin superfamily - -
Structural Details of PDB entry 1GT1

Structural Details of PDB entry 1GT1

PDBid Chains Hinge Swapped Domain
1GT1 A,B A:122-125,B:122-125 A:126-159,B:126-159

Swapped-domain interface residues and interactions:

Chains Residues
A 19, 20, 21, 22, 23, 24, 25, 27, 100, 117, 118, 128, 129, 131, 132, 133, 135, 136, 139, 141, 145, 146, 147, 148, 149, 150, 152, 154, 155, 156, 157, 158, 159,
B 19, 20, 21, 22, 23, 24, 25, 27, 64, 100, 116, 117, 118, 128, 129, 131, 132, 133, 135, 139, 141, 145, 146, 147, 148, 149, 150, 152, 153, 156, 157,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 18, 30, 37, 39, 92, 93, 97, 98, 102, 114, 116, 120, 122, 123, 124, 125,
B 18, 30, 37, 39, 57, 59, 92, 93, 97, 98, 102, 114, 120, 122, 123, 124,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationASN(154)ASP, No mutationASN(154)ASP,
BNo mutationNo mutationNo mutationASN(154)ASP,

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1GT1 B:1GT1

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1GT1.ali
atm file:1GT1.atm
cof file:1GT1.cof
hbd file:1GT1.hbd
html file:1GT1.html
pdb file:1GT1.pdb
ps file:1GT1.ps
psa file:1GT1.psa
rtf file:1GT1.rtf
sst file:1GT1.sst
tem file:1GT1.tem