Pfam Domains mapped on to the structure: 1G8E

No.	Chain ID	Pfam ID	Pfam Description	Linkout - Pfam	Linkout - CDD
1	A	PF05247	Flagellar transcriptional activator (FlhD)	PF05247	PF05247

Gene Ontology Annotations: 1G8E

No.	GO ID	GO Description	Linkout - AmiGO
1	GO:0045893	positive regulation of transcription, DNA-dependent	GO:0045893

Conserved Domain Database Superfamily Annotations: 1G8E

No.	PDB ID	PSSM ID	CDD Accession	Superfamily Short Name	Linkout - CDD
1	1G8E	186641	cl05012	FlhD	superfamily - -

Structural Details of PDB entry 1G8E PDBid Chains Hinge Swapped Domain 1G8E A,B A:64-69,B:64-69 A:70-98,B:70-82 Swapped-domain interface residues and interactions: Chains Residues A 41, 42, 45, 52, 53, 56, 57, 70, 72, 75, 76, 78, 79, 80, 81, 83, 86, 89, 90, 95, 96, 98, B 41, 42, 45, 52, 53, 56, 57, 70, 72, 75, 76, 78, 79, 80, 81, Non-swapped-domain interface residues and interactions: Chains Residues A 1, 2, 3, 6, 9, 10, 13, 16, 17, 18, 20, 23, 24, 27, 34, 35, 36, 37, 38, 39, 46, 49, 61, 62, 63, 64, 65, 66, 67, 68, 69, B 3, 4, 5, 6, 9, 10, 13, 16, 17, 20, 23, 24, 27, 28, 31, 34, 35, 36, 37, 38, 39, 46, 49, 55, 59, 61, 62, 63, 64, 65, 66, 67, 68, 69,

Swapped domains are represented using trasperent spheres. Non-swapped part is represented using light color and cartoon representation. Hinge region is shown in yellow color.

Mutations in critical regions:

Chains	Hinge	Domain swapped interface	Non-swapped interface	Swapped Domain
A	No mutation	No mutation	No mutation	No mutation
B	No mutation	No mutation	No mutation	No mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

2D-plot:

A:1G8E

B:1G8E

JOY Structural annotation for hinge hinge and swapped domain:

Hinge	Swapped domain

JOY output:

ali file:	1G8E.ali
atm file:	1G8E.atm
cof file:	1G8E.cof
hbd file:	1G8E.hbd
html file:	1G8E.html
pdb file:	1G8E.pdb
ps file:	1G8E.ps
psa file:	1G8E.psa
rtf file:	1G8E.rtf
sst file:	1G8E.sst
tem file:	1G8E.tem