Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 1G6O

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00437 Type II/IV secretion system protein PF00437 PF00437
2 A PF00270 DEAD/DEAH box helicase PF00270 PF00270

Conserved Domain Database Superfamily Annotations: 1G6O

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1G6O 29996 cd01130 VirB11-like_ATPase - cl09099
2 1G6O 212613 cl09099 P-loop_NTPase superfamily - -
3 1G6O 212613 cl09099 P-loop_NTPase superfamily - -
Structural Details of PDB entry 1G6O

Structural Details of PDB entry 1G6O

PDBid Chains Hinge Swapped Domain
1G6O A,B A:296-308,B:296-308 A:309-328,B:309-328

Swapped-domain interface residues and interactions:

Chains Residues
A 309, 328,
B 318,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 6, 9, 10, 13, 14, 17, 18, 20, 21, 93, 198, 200, 208, 216, 217, 218, 219, 220, 221, 222, 226, 227, 231, 232, 235, 238, 240, 242, 258, 259, 262, 263, 264, 266, 293, 296, 297, 298, 301,
B 47, 49, 51, 54, 57, 59, 65, 74, 77, 78, 79, 86, 98, 99, 100, 102, 103, 105, 113, 115, 117, 120, 121, 122, 123, 125, 126, 129, 131, 133, 179, 180, 181, 273, 274, 275, 279, 282, 283, 286, 289, 290, 295, 297, 299,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1G6O B:1G6O

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1G6O.ali
atm file:1G6O.atm
cof file:1G6O.cof
hbd file:1G6O.hbd
html file:1G6O.html
pdb file:1G6O.pdb
ps file:1G6O.ps
psa file:1G6O.psa
rtf file:1G6O.rtf
sst file:1G6O.sst
tem file:1G6O.tem