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Pfam Domains mapped on to the structure: 1FZV

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00341 Platelet-derived growth factor (PDGF) PF00341 PF00341

Conserved Domain Database Superfamily Annotations: 1FZV

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1FZV 29041 cd00135 PDGF - cl00116
2 1FZV 206845 cl00116 PDGF superfamily - -
Structural Details of PDB entry 1FZV

Structural Details of PDB entry 1FZV

PDBid Chains Hinge Swapped Domain
1FZV A,B A:35-38,B:35-38 A:23-34,B:23-34

Swapped-domain interface residues and interactions:

Chains Residues
A 23, 24, 25, 26, 29, 30, 32, 33, 41, 58, 60, 61, 62, 86, 87, 88,
B 23, 24, 25, 26, 29, 30, 32, 33, 41, 58, 60, 61, 62, 86, 87, 88,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 21, 22, 36, 38, 39, 40, 57, 59, 67, 68, 69, 85, 90, 100, 102, 117,
B 21, 22, 36, 38, 39, 40, 57, 59, 67, 68, 69, 85, 90, 100, 102,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1FZV B:1FZV

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1FZV.ali
atm file:1FZV.atm
cof file:1FZV.cof
hbd file:1FZV.hbd
html file:1FZV.html
pdb file:1FZV.pdb
ps file:1FZV.ps
psa file:1FZV.psa
rtf file:1FZV.rtf
sst file:1FZV.sst
tem file:1FZV.tem