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Pfam Domains mapped on to the structure: 1DZR

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PF00908 PF00908

Conserved Domain Database Superfamily Annotations: 1DZR

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1DZR 212615 cl09118 Cupin_2 superfamily - -
Structural Details of PDB entry 1DZR

Structural Details of PDB entry 1DZR

PDBid Chains Hinge Swapped Domain
1DZR A,B A:17-20,B:17-20;A:30-33,B:30-33 A:21-29,B:21-29

Swapped-domain interface residues and interactions:

Chains Residues
A 23, 24, 25, 26, 27, 28, 29, 49, 50, 51, 52, 53, 54, 55, 58,
B 23, 24, 25, 26, 27, 28, 29, 49, 50, 51, 52, 53, 55,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 30, 31, 32, 33, 34, 45, 47, 48, 60, 76, 78, 79, 130, 132, 134, 138, 165, 167, 183,
B 30, 31, 32, 33, 34, 45, 47, 48, 60, 76, 78, 79, 128, 130, 132, 133, 134, 138,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1DZR B:1DZR

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1DZR.ali
atm file:1DZR.atm
cof file:1DZR.cof
hbd file:1DZR.hbd
html file:1DZR.html
pdb file:1DZR.pdb
ps file:1DZR.ps
psa file:1DZR.psa
rtf file:1DZR.rtf
sst file:1DZR.sst
tem file:1DZR.tem