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Pfam Domains mapped on to the structure: 1DMH

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF04444 Catechol dioxygenase N terminus PF04444 PF04444
2 A PF00775 Dioxygenase PF00775 PF00775

Gene Ontology Annotations: 1DMH

No. GO ID GO Description Linkout - AmiGO
1 GO:0055114 oxidation-reduction process GO:0055114

Conserved Domain Database Superfamily Annotations: 1DMH

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1DMH 48024 cd03460 1,2-CTD - cl01383
2 1DMH 211449 cl01383 Peptidase_M14NE-CP-C_like superfamily - -
3 1DMH 211449 cl01383 Peptidase_M14NE-CP-C_like superfamily - -
Structural Details of PDB entry 1DMH

Structural Details of PDB entry 1DMH

PDBid Chains Hinge Swapped Domain
1DMH A,B A:68-71,B:68-71 A:3-67,B:3-67

Swapped-domain interface residues and interactions:

Chains Residues
A 3, 5, 10, 11, 14, 17, 18, 19, 20, 23, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 40, 41, 42, 44, 45, 46, 47, 48, 49, 50, 52, 53, 54, 55, 56, 59, 60, 62, 63, 65, 66, 67, 69, 71, 72, 78, 79, 84, 90, 91, 214, 215, 216, 217, 304, 305, 306,
B 3, 5, 10, 11, 14, 17, 18, 19, 20, 23, 25, 26, 27, 29, 30, 31, 32, 33, 34, 36, 37, 38, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 52, 53, 54, 55, 56, 59, 60, 62, 63, 65, 66, 67, 69, 71, 72, 78, 79, 84, 87, 90, 91, 214, 215, 216, 217, 304, 305, 306,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 75, 80, 81, 82, 83, 86, 87, 94, 211, 255, 307, 311,
B 75, 80, 81, 82, 83, 86, 88, 211, 255, 307,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

B:1DMH A:1DMH

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1DMH.ali
atm file:1DMH.atm
cof file:1DMH.cof
hbd file:1DMH.hbd
html file:1DMH.html
pdb file:1DMH.pdb
ps file:1DMH.ps
psa file:1DMH.psa
rtf file:1DMH.rtf
sst file:1DMH.sst
tem file:1DMH.tem