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Pfam Domains mapped on to the structure: 1DGF

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00199 Catalase PF00199 PF00199

Conserved Domain Database Superfamily Annotations: 1DGF

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1DGF 163712 cd08156 catalase_clade_3 - cl09506
2 1DGF 209025 cl09506 catalase_like superfamily - -
3 1DGF 209025 cl09506 catalase_like superfamily - -
Structural Details of PDB entry 1DGF

Structural Details of PDB entry 1DGF

PDBid Chains Hinge Swapped Domain
1DGF A,B A:67-77,B:67-77 A:5-66,B:5-66

Swapped-domain interface residues and interactions:

Chains Residues
A 5, 8, 9, 11, 12, 13, 15, 16, 19, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 140, 141, 142, 337, 338, 352, 355, 368, 371, 378, 381, 382, 383, 384, 385, 387, 390, 401, 402, 409, 410, 411, 412, 413, 414, 415, 416, 418, 419,
B 5, 8, 9, 11, 12, 13, 15, 16, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 140, 141, 142, 337, 338, 352, 355, 368, 371, 378, 381, 382, 383, 384, 385, 387, 390, 401, 402, 409, 410, 411, 412, 413, 414, 415, 418, 419,
C 49, 50, 51, 52, 73, 157, 159, 160, 162, 174, 178, 347, 349, 352, 357, 360, 361, 364, 425, 426, 427, 428, 429, 430, 431, 432, 433,
D 49, 50, 51, 52, 73, 157, 159, 160, 162, 174, 178, 347, 349, 352, 357, 360, 361, 364, 425, 426, 427, 428, 429, 430, 431, 432, 433,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 67, 68, 69, 70, 71, 73, 119, 120, 121, 122, 157, 158, 159, 160, 161, 162, 163, 166, 167, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 180, 181, 184, 185, 188, 189, 251, 254, 255, 259, 262, 263, 266, 289, 295, 296, 297, 322, 323, 324, 325, 326, 327, 328, 331, 339, 341, 345, 347, 349, 353, 356, 357, 360, 361, 363, 364, 366, 367, 369, 373, 374, 386, 388, 389, 391, 392, 393, 394, 395, 396, 397, 399, 400, 403, 404, 405, 406, 407, 408, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 469, 471, 473, 501,
B 67, 68, 69, 70, 71, 73, 119, 120, 121, 122, 157, 158, 159, 160, 161, 162, 163, 166, 167, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 180, 181, 184, 185, 188, 189, 251, 254, 255, 259, 262, 263, 266, 289, 295, 296, 297, 322, 323, 324, 325, 326, 327, 328, 331, 339, 341, 345, 347, 349, 353, 356, 357, 360, 361, 363, 364, 366, 367, 369, 372, 373, 374, 386, 388, 389, 391, 392, 393, 394, 395, 396, 397, 399, 400, 403, 404, 405, 406, 407, 408, 420, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431, 432, 433, 434, 469, 471, 473, 501,
C 5, 8, 9, 11, 12, 13, 15, 16, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 77, 119, 120, 121, 122, 140, 141, 142, 158, 161, 163, 166, 167, 169, 170, 171, 172, 173, 175, 176, 177, 180, 181, 184, 185, 188, 189, 251, 254, 255, 259, 262, 263, 266, 289, 295, 296, 297, 322, 323, 324, 325, 326, 327, 331, 337, 338, 339, 341, 345, 353, 355, 356, 363, 366, 367, 368, 369, 371, 373, 374, 378, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 418, 419, 420, 422, 423, 424, 469, 471, 473, 501,
D 5, 8, 9, 11, 12, 13, 15, 16, 19, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 53, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 119, 120, 121, 122, 140, 141, 142, 158, 161, 163, 166, 167, 169, 170, 171, 172, 173, 175, 176, 177, 180, 181, 184, 185, 188, 189, 251, 254, 255, 259, 262, 263, 266, 289, 295, 296, 297, 322, 323, 324, 325, 326, 327, 331, 337, 338, 339, 341, 345, 353, 355, 356, 363, 366, 367, 368, 369, 371, 373, 374, 378, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391, 392, 393, 394, 395, 396, 397, 399, 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411, 412, 413, 414, 415, 416, 418, 419, 420, 422, 423, 424, 434, 469, 471, 473,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1DGF D:1DGF

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1DGF.ali
atm file:1DGF.atm
cof file:1DGF.cof
hbd file:1DGF.hbd
html file:1DGF.html
pdb file:1DGF.pdb
ps file:1DGF.ps
psa file:1DGF.psa
rtf file:1DGF.rtf
sst file:1DGF.sst
tem file:1DGF.tem