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Conserved Domain Database Superfamily Annotations: 1D9C

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1D9C 109758 cl08283 IFN-gamma superfamily - -
Structural Details of PDB entry 1D9C

Structural Details of PDB entry 1D9C

PDBid Chains Hinge Swapped Domain
1D9C A,B A:82-86,B:82-86 A:87-121,B:203-81

Swapped-domain interface residues and interactions:

Chains Residues
A 87, 88, 91, 92, 94, 95, 96, 98, 100, 101, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 119, 120, 121,
B 208, 211, 212, 215, 217, 222, 228, 230, 232, 245, 248, 255, 256, 259, 280, 281,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 8, 11, 12, 15, 16, 17, 21, 22, 24, 25, 26, 27, 28, 29, 30, 32, 33, 35, 36, 39, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 55, 56, 59, 60, 73, 76, 77, 80, 81, 82, 83,
B 204, 205, 216, 221, 224, 225, 226, 227, 229, 233, 235, 236, 239, 241, 242, 243, 244, 246, 247, 249, 250, 251, 252, 253, 260, 273, 277, 282, 283, 288, 291, 292, 294, 295, 296, 298, 300, 303, 304, 305, 306, 307, 308, 309, 310, 311, 312, 313, 314, 315, 316, 317, 319, 320,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1D9C B:1D9C

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1D9C.ali
atm file:1D9C.atm
cof file:1D9C.cof
hbd file:1D9C.hbd
html file:1D9C.html
pdb file:1D9C.pdb
ps file:1D9C.ps
psa file:1D9C.psa
rtf file:1D9C.rtf
sst file:1D9C.sst
tem file:1D9C.tem