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Pfam Domains mapped on to the structure: 1CKS

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF01111 Cyclin-dependent kinase regulatory subunit PF01111 PF01111

Conserved Domain Database Superfamily Annotations: 1CKS

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1CKS 198805 cl03104 CKS superfamily - -
Structural Details of PDB entry 1CKS

Structural Details of PDB entry 1CKS

PDBid Chains Hinge Swapped Domain
1CKS A,C,B A:61-65,C:61-65,B:61-65 A:66-75,C:66-79,B:66-79

Swapped-domain interface residues and interactions:

Chains Residues
A 66, 67, 68, 69, 70, 71, 72, 73, 75,
B 66, 67, 68, 69, 70, 71, 72, 73, 78, 79,
C 66, 67, 68, 69, 70, 71, 72, 73, 78, 79,
D 16, 17, 18, 19, 20, 21, 22, 23, 24, 53, 54, 55, 56, 57, 58, 59, 60,
E 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 53, 54, 55, 56, 57, 58, 59, 60,
F 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 53, 54, 55, 56, 57, 58, 59, 60,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 29, 32, 34, 35, 37, 38, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,
B 2, 3, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 29, 30, 32, 34, 35, 37, 38, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,
C 2, 3, 5, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 29, 32, 34, 35, 36, 37, 38, 48, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65,
D 2, 3, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 25, 26, 29, 30, 32, 34, 35, 37, 38, 48, 49, 50, 51, 52, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 78, 79,
E 2, 3, 5, 7, 8, 9, 10, 11, 12, 13, 14, 25, 26, 29, 32, 34, 35, 36, 37, 38, 48, 50, 51, 52, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 78, 79,
F 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 25, 26, 29, 32, 34, 35, 37, 38, 49, 50, 51, 52, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73,

Swapped domains are represented using trasperent spheres.
Non-swapped part is reprented using light color and cartoon reprentation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
CNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo Jmol_logo

2D-plot:

C:1CKS F:1CKS 3:1CKS A:1CKS B:1CKS

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1CKS.ali
atm file:1CKS.atm
cof file:1CKS.cof
hbd file:1CKS.hbd
html file:1CKS.html
pdb file:1CKS.pdb
ps file:1CKS.ps
psa file:1CKS.psa
rtf file:1CKS.rtf
sst file:1CKS.sst
tem file:1CKS.tem