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Pfam Domains mapped on to the structure: 1C1E

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 L PF13895 Immunoglobulin domain PF13895 PF13895
2 H PF13895 Immunoglobulin domain PF13895 PF13895

Conserved Domain Database Superfamily Annotations: 1C1E

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1C1E 143181 cd04980 IgV_L_kappa - cl11960
2 1C1E 212623 cl11960 Ig superfamily - -
3 1C1E 143323 cd07699 IgC_L - cl11960
4 1C1E 212623 cl11960 Ig superfamily - -
5 1C1E 212623 cl11960 Ig superfamily - -
Structural Details of PDB entry 1C1E

Structural Details of PDB entry 1C1E

PDBid Chains Hinge Swapped Domain
1C1E H,L H:35-36,L:94-97 H:1-34,L:1-93

Swapped-domain interface residues and interactions:

Chains Residues
H 100, 101, 103, 104, 105,
L 32, 34, 36, 38, 41, 43, 44, 46, 49, 50, 55, 87, 89, 91,

Non-swapped-domain interface residues and interactions:

Chains Residues
H 39, 44, 45, 47, 50, 58, 60, 91, 98, 99, 102, 122, 123, 124, 125, 126, 127, 129, 130, 139, 143, 145, 172, 173, 174, 175, 177, 178, 179, 188, 190, 221,
L 94, 95, 96, 98, 99, 100, 114, 116, 118, 119, 121, 122, 123, 124, 127, 131, 133, 135, 137, 138, 160, 161, 162, 163, 164, 167, 174, 176, 178, 180, 207, 208, 209, 211,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
HNo mutationNo mutationNo mutationNo mutation
LNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

H:1C1E

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1C1E.ali
atm file:1C1E.atm
cof file:1C1E.cof
hbd file:1C1E.hbd
html file:1C1E.html
pdb file:1C1E.pdb
ps file:1C1E.ps
psa file:1C1E.psa
rtf file:1C1E.rtf
sst file:1C1E.sst
tem file:1C1E.tem