Home BrowseSearch Help Group

Pfam Domains mapped on to the structure: 1BI9

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00171 Aldehyde dehydrogenase family PF00171 PF00171

Conserved Domain Database Superfamily Annotations: 1BI9

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1BI9 143459 cd07141 ALDH_F1AB_F2_RALDH1 - cl11961
2 1BI9 212336 cl11961 ALDH-SF superfamily - -
3 1BI9 212336 cl11961 ALDH-SF superfamily - -
Structural Details of PDB entry 1BI9

Structural Details of PDB entry 1BI9

PDBid Chains Hinge Swapped Domain
1BI9 A,B A:136-139,B:136-139;A:156-161,B:156-161 A:140-155,B:140-155

Swapped-domain interface residues and interactions:

Chains Residues
A 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 153, 154, 155,
B 140, 141, 142, 143, 144, 145, 147, 148, 149, 150, 151, 153, 154, 155,
C 80, 81, 82, 137, 140, 141, 142, 143, 144, 145, 154, 155,
D 80, 81, 137, 140, 141, 142, 143, 144, 154, 155,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 72, 77, 78, 80, 81, 82, 84, 86, 89, 127, 130, 131, 134, 135, 137, 138, 139, 156, 157, 158, 239, 251, 254, 255, 258, 259, 260, 261, 262, 263, 265, 267, 269, 285, 418, 425, 434, 435, 436, 437, 439, 440, 441, 443, 444, 445, 448, 449, 450, 451, 452, 453, 454, 455, 478, 479, 480, 483, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500,
B 72, 73, 77, 78, 80, 81, 82, 84, 86, 89, 127, 130, 131, 134, 135, 137, 138, 139, 156, 157, 158, 239, 251, 254, 255, 258, 259, 260, 261, 262, 263, 265, 267, 269, 285, 425, 434, 435, 436, 437, 439, 440, 441, 443, 444, 445, 448, 449, 450, 451, 452, 453, 454, 455, 478, 479, 480, 483, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500,
C 72, 73, 77, 78, 84, 86, 89, 127, 130, 131, 134, 135, 138, 139, 147, 148, 149, 150, 151, 153, 156, 157, 158, 186, 236, 239, 251, 254, 255, 258, 259, 260, 261, 262, 263, 267, 269, 285, 425, 434, 435, 436, 437, 439, 440, 441, 443, 444, 445, 446, 448, 449, 450, 451, 452, 453, 454, 455, 457, 479, 480, 483, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499, 500,
D 72, 77, 78, 82, 84, 86, 89, 127, 130, 131, 134, 135, 138, 139, 145, 147, 148, 149, 150, 151, 153, 156, 157, 158, 239, 251, 254, 255, 258, 259, 260, 261, 262, 263, 267, 269, 285, 418, 425, 434, 435, 436, 437, 439, 440, 441, 443, 444, 445, 448, 449, 450, 451, 452, 453, 454, 455, 457, 478, 479, 480, 483, 488, 489, 490, 491, 492, 493, 494, 495, 496, 497, 498, 499,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1BI9 D:1BI9

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1BI9.ali
atm file:1BI9.atm
cof file:1BI9.cof
hbd file:1BI9.hbd
html file:1BI9.html
pdb file:1BI9.pdb
ps file:1BI9.ps
psa file:1BI9.psa
rtf file:1BI9.rtf
sst file:1BI9.sst
tem file:1BI9.tem