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Pfam Domains mapped on to the structure: 1B67

No. Chain ID Pfam ID Pfam Description Linkout - Pfam Linkout - CDD
1 A PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone PF00808 PF00808
2 A PF00125 Core histone H2A/H2B/H3/H4 PF00125 PF00125
3 A PF02969 TATA box binding protein associated factor (TAF) PF02969 PF02969

Conserved Domain Database Superfamily Annotations: 1B67

No. PDB ID PSSM ID CDD Accession Superfamily Short Name Linkout - CDD
1 1B67 206819 H2A superfamily C -
Structural Details of PDB entry 1B67

Structural Details of PDB entry 1B67

PDBid Chains Hinge Swapped Domain
1B67 A,B A:34-38,B:34-38 A:39-69,B:103-33

Swapped-domain interface residues and interactions:

Chains Residues
A 40, 41, 42, 45, 54, 55, 56, 57, 58, 61, 62, 65, 69,
B 113, 116, 117, 118, 119, 120, 122, 124, 125, 128, 129,

Non-swapped-domain interface residues and interactions:

Chains Residues
A 3, 4, 5, 8, 9, 11, 12, 13, 16, 17, 18, 19, 20, 22, 24, 25, 28, 29, 32, 33, 34, 36, 37, 38,
B 103, 104, 105, 108, 111, 112, 115, 132, 133, 134, 135, 136, 137, 138, 140, 141, 142, 145, 154, 155, 156, 157, 158, 161, 162, 165,

Swapped domains are represented using trasperent spheres.
Non-swapped part is represented using light color and cartoon representation.
Hinge region is shown in yellow color.

Mutations in critical regions:

Chains Hinge Domain swapped interface Non-swapped interface Swapped Domain
ANo mutationNo mutationNo mutationNo mutation
BNo mutationNo mutationNo mutationNo mutation

HIDE output:

Homologues found through HIDE algorithm

JMOL Visualization:

Jmol_logo            Jmol_logo            Jmol_logo

2D-plot:

A:1B67 B:1B67

JOY Structural annotation for hinge hinge and swapped domain:

Hinge Swapped domain

JOY output:

ali file:1B67.ali
atm file:1B67.atm
cof file:1B67.cof
hbd file:1B67.hbd
html file:1B67.html
pdb file:1B67.pdb
ps file:1B67.ps
psa file:1B67.psa
rtf file:1B67.rtf
sst file:1B67.sst
tem file:1B67.tem