Motif    Start   End  Length   Motif
Motif1    5      7      3      [H][QV][EN]
Motif2    18     20     3      [W][HK][TD]
Motif3    55     58     4      [G][V][E][F]


Motif marked on the alignment

              ***          ***                                  ****  
d2fmaa  : CKFLHQERMDVCETHLHWHTVAKETCSEK------STNLHDYGMLLPCGIDKFRGVEFVC
d2m05a  : CQFSHVNSRDQCNDYQHWKDEAGKQCKTKKSKGNKDMIVRSFAVLEPCALDMFTGVEFVC


                                                                      
d2fmaa  : CPL
d2m05a  : CPN