Motif    Start   End  Length   Motif
Motif1    28     33     6      [FL][H][TL][LY][LA][AI]
Motif2    81     96     16     [RS][TEA][AD][AF][AQT][MYQ][W][GTL][CF][HA][IFL][H][N][KNE][V][N]


Motif marked on the alignment

                                     ******                           
d1jr8a  : ------------DDKVKKEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPC
d3gwla  : ----------------MLHWGPKYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPC
d3tk0a  : MRTQQRDTFREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPS


                              ****************                        
d1jr8a  : GECSYHFVKLIEKYPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCATILEDYDCGC---
d3gwla  : TRCQHHAFSYLTKNPLTLNNSEDFQYWTFAFHNNVNNRLNKKIISWSEYKNIYEQSIL--
d3tk0a  : EECAEDLRKRLARNHPDTRTRAAFTQWLCHLHNEVNRKLGKPDFDCSKVDERWRDGWKDG


                                                                      
d1jr8a  : ---
d3gwla  : ---
d3tk0a  : SCD