Motif    Start   End  Length   Motif
Motif1    26     28     3      [FV][TQ][L]
Motif2    85     88     4      [IV][AS][V][R]
Motif3    124    129    6      [DT][LP][VL][IL][AF][GY]
Motif4    138    141    4      [LI][GA][LA][A]


Motif marked on the alignment

                                   ***                                
d1jjcb  : LK---AEALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALFAAGMRPINNVVD
d1ni5a  : GQSENIVPWQTWLQPLE-LPAGLGSVQLNA------------------------------


                                  ****                                
d1jjcb  : VTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDG-VERTLHP-----------
d1ni5a  : ---------GGDIRPPRADE---AVSVRFKAPG-LLHIVGRNGGRKLKKIWQELGVPPWL


             ******        ****                                       
d1jjcb  : --EDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLR
d1ni5a  : RDTTPLLFYG----ETLIAAAGVFVTQEGVAE--GENGVSFVWQKTL-------------


                                                                      
d1jjcb  : TEASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPK
d1ni5a  : ---------------------------------------------S