Reading input alignment file to find conserved blocks of secondary structure The input structure based alignment from Comparer _____________________________________________ >P1;d1f5ma- CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEEECC-------------------------CCCEEECC--CHHHHHHHHHCCCEEE--CCHHHC-----------------------------------CCCCCCCC--------------------------------------------------CCCEEEEEEEECCCC-CEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHCCC--------------------- >P1;d1jmrb4 -------------------------------------CHHHHHHHHHHHHHHCC-----CC-EEEEEEEEC---CEEEEEEEECCC----------C----CCCCCCCC---CCEEECCCC--HHHHHHHCCC-----CHHHHHHHHH----------------HC--CCC-----------------CCCCC------CCCCHHHHHHHHHHHHHH---CCEEEE---C-CCCC----CEEEEEEEEECC-CCCEEEEEEEEEEH-----------------------------H--HCCHHHHHHHHHHHH--------------HHHHHHHHHCCC--------------------- >P1;d1mc0a1 --------------CHHHHHHHHHHHHCCCCC-----CHHHHHHHHHHHHHHHC-----CEEEEEEEEECCC-CCEEEEEEECCEEE------E-----------------EEEEEECC--CCCHHHHHHHCCC-EE--HHHCC------------------------------------HHHHHHHHHHHCC---------------------------------------------CCCCEEEEEEECCCCCCEEEEEEEEEEC-----------------------------CCCCCCCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >P1;d1mc0a2 -------------------------------------CCCCHHHHHHHHHHHHH-----CEEEEEEEEECC---CCEEEEEECCEEC------C------CC--------CCCCEECCC--CHHHHHHHHHCCCEEE--CCCCCC-----------------------------------CCCCCCCHHHHCC---------------------------------------------CCCCEEEEEEECCC-CCEEEEEEEEEEC-----------------------------CCCCCCHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHCCC--------- >P1;d1stza2 -----------------------CCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH-----CC-EEEEECCC-HH-HCCCCEEEEEECCCCEEEEEEEE---CCEEEEEEEEECCCCCCHHH---HHHHHHHHHC-----CCCHHHHHHCCC---HHHHCCHHHHHHHHHHCCCCCCEEEECHHHHHHCCCCCHH------HHHHHHHHCCCHHHHHHHCCCCCEEEE---HHHHCCHHHCCEEEEEEEEEEC-C-EEEEEEEEEEEC-----------------------------C---CCHHHHHHHHHHHH--------------HHHHHHHHHCC---------------------- >P1;d1yspa1 -------------------------------------CHHHHHHHHHHHHHHHH-----CC-CEEEEEEEC---CEEEEEEEECCC----------------------C---CCEEECCCC--HHHHHHHHCC-----CHHHHHHHHC----------------CC--CCC-----------------CCCCC------CCCCHHHHHHHHHHHHHH---CCEEEE---C-CCCC----CCEEEEEEEECC-CCCEEEEEEECCCC-----------------------------C--CCCHHHHHHHHHHHH--------------HHHHHHHHHCCC--------------------- >P1;d1ysqa1 -----------------------------------CHHHHHHHHHHHHHHHHHH-----CC-EEEEEEEEC---CEEEEEEEECCC----------C---CCCCCCCCC---CCEEEHHHC--HHHHHHHHCC-----CHHHHHHHHH----------------HCCCCCC-----------------CCCCC------CCCCHHHHHHHHHHHHHH---CCEEEE---C-CCCC----CEEEEEEEECCC-CCCCCEEEEEEEEH-----------------------------H--HHHHHCHHHHHHHHH--------------HHHHHHHHHHHHCCCC----------------- >P1;d2lb9a1 --------------------------------------CHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECCC------CCCCCCC-------------CEECHHHCCCHHHHHHHHCCCEECCC--HHHC---CC---CC--CCC------------------CCCCCCCCCCCCCCC------CCCCCHHHHHHHHCC------------------------CCCEEEEEEEEEC--CEEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHHC------------------ >P1;d2o9aa2 -----------------------------------CHHHHHHHHHHHHHHHHHH-----CC-EEEEEEEECCC-CEEEEEEEECCC--------------CCCCCCCCC---CCEECCCCC--HHHHHHHCCC-----CHHHHHHHHH----------------CC--CCC-----------------CCCCC------CCCCHHHHHHHHHHHHHH---CCEEEE---C-CCCC----CEEEEEEEEECC-CCCEEEEEEEEEEC-----------------------------C--CCCHHHHHHHHHHHH--------------HHHHHHHHHHHHHC------------------- >P1;d2oola1 ----------------CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCCCC-------------CEECHHHCCHHHHHHHHHCCEEEECC--CCC-----C---CC--CCC-----------CCCCCCCCCCCCCCCCCC-----------CCCCHHHHHHHHHH------------------------CCCEEEEEEEEEC--CEEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHHHHHC--------------- >P1;d3mmha- ------CCCCCCCCC-CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEEEC-CCCEEEEEEEECCC-------------------------CCCEEECC--CHHHHHHHHHCCCEEE--CCHHHC-----------------------------------CCCCCCCC--------------------------------------------------CCCEEEEEEEEE-CC-EEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHHHCC---------------- >P1;d3nhqa3 ------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHH------HHHHHHHHHHCCHHHHHH-CCCCCHHHHCCCCEEEEEEC--------------CEEEEECCCC-HHHHHHHHHHHHCCCCCCEEEECCC------------CCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC-----------CCHHHCHHHHHHHHHHH------HCCCCCCCCHHHHHHHHHHHHHHHHHHC--------------- >P1;d3obfa1 -------------------------------------CHHHHHHHHHHHHHHHH-----CC-CEEE-CCCC---CC-CCCEEECCC----------C---CCCCC-CCC---CCCCCCCCC--HHHHHHHHCC-----CHHHHHHHHH----------------CCCCCCC---------------------C------CCCHHHHHHHHHHHC-CC---CCEEEE---C-CCCC----CEEEEEEEEECC-CCC-EEEEEEEEEH-----------------------------H--HCCHHHHHHHHHHHH--------------HHHHHHHHHCCCC-------------------- >P1;d3rfba- ---------------CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC----CEEEEEEEEECC---CEEEEEEEECCC-------------------------CCCEEECC--CHHHHHHHHCCCCEEE--CCCCCC-----------------------------------CCCCCCCC--------------------------------------------------CCCEEEEEEEEE-CC-EEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHCCCCCCCCCC--------------C >P1;d3zq5a3 ----------------------------------------------------------------------------------------------------------------------------CHHHHHHHH------HHHHHHHHHCCCHHHHHHCCHH-HHHHCCCCCEEEEEEC--------------CEEEEEECCCCHHHHHHHHHHHHHC-CCCCEEECCHHHCCHHHHHHHHHHCEEEEEEECC--CEEEEEEECCCCEEEEECCCHHHCCEEECCCCCEEECCCCC----------------CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---------- >P1;d4cqha2 ------------------------CHHHHHHHCC-CCCHHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCCCC-------------CEECHHHCCHHHHHHCCCCCEEEECC--CCC-----C---CC--CCC-----------CCCCCCCCCCCCCCCCCC-----------CCCCHHHHHHHHHC------------------------CCCEEEEEEEEEC--CEEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHC--------------------- >P1;d5m82a1 --------------------------------------CHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCHHHHH--------CCCCCCCCCHHHHCCCHHHHHCCCEEECC--CCCC---CC---C--------------------------------------------------HHHHHHHHHC------------------------CEEEEEEEEEEEC--CEEEEEEEEEEEC-----------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHHHHHH------------CCC >P1;d5viqa2 ------------------CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCCCC-------------CEECHHHCCHHHHHHHHHCCEEEECC--CCC-----C---CC--CCC-----------CCCCCCCCCCCCCCCCCC-----------CCCCHHHHHHHHHC------------------------CCCEEEEEEEEEC--CEEEEEEEEEEC------------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHC------------------- >P1;d6p58a- ---------------------------------CHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCCC--------------CEECCCHHHHHCHHHHHCCCCEEECC--HHHC---CC---C--------------------------------------------------HHHHHHHCCC------------------------CCCEEEEEEEEEC--CEEEEEEEEEECC-----------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHC------------------- >P1;d6xhha- ---------------------CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCCCC-------------CEECCHHHHHCCCHHHHHCCCEEEEE--CCC----EE---CC--EEC-----------CEECC--------------CCC------CCCCCHHHHHHHHHC------------------------CCCEEEEEEEEEC--CEEEEEEEEEECC-----------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHHHHHC------------------ >P1;d7ckva1 ---------------------------------------CHHHHHHHHHHHHHH-----CCCEEEEEEECC--CCCEEEEEEEECC-------CCCCHHHC----------CCCCCCCC---HHHHHHHCCCCCEEECC--CCCC------------------------------------------------------CCCCCHHHHHHHHHC------------------------CCCEEEEEEEEC----CEEEEEEEEECC-----------------------------CCCCCCHHHHHHHH------------------HHHHHHHHHHC---------------------- PSA >P1;d1f5ma- a8a89994429079a2739500650171069109757626400550030023006209260100000013b7aa50042112317a-------------------------02940415--6000030055470130--520782-----------------------------------9b13421a--------------------------------------------------703000000032897-60200000003------------------------------75720664036004------------------500830163070--------------------- >P1;d1jmrb4 -------------------------------------a1592049203402640-----20-000004079---250202011807----------4----b0507064---934040000--0000000030-----5693075017----------------62--908-----------------43184------025549404610550383---310207---2-0248----601000000138-b1302000000032-----------------------------9--406a84276008104--------------610630065185--------------------- >P1;d1mc0a1 --------------896157308912b5072a-----50230023004102710-----5053000010497-77402030007741------c-----------------a333141a--5220060193382-03--27305------------------------------------a503720260084---------------------------------------------a040000002328977704000000109-----------------------------696806950260062005----------402950661166357565566767885856777796a >P1;d1mc0a2 -------------------------------------65062026002503650-----50420100226a---9402040252831------9------68--------881141418--3101040074182310--460773-----------------------------------8404633167474---------------------------------------------70500000003478-8713000100014-----------------------------b36607770361067------------------0175025113855777856789a--------- >P1;d1stza2 -----------------------a196047062573630550053004100720-----70-00001116-48-81605500053468650300030---40232142618189657076---2266018205-----741022047650---9607a6810540271014a383104124820683b50777------10620472174490057006bb14234---0850848704400000030438-a-541100000004-----------------------------8---183a2054004300--------------63036105836---------------------- >P1;d1yspa1 -------------------------------------a1591037106502740-----91-100002259---510202121539----------------------4---857330000--0000000012-----8395068108----------------b0--817-----------------65086------012429602630750582---410202---2-0176----631100000226-72602000001062-----------------------------9--734694057007201--------------600750065284--------------------- >P1;d1ysqa1 -----------------------------------4ab0291004203700760-----00-000002258---320200001404----------9---392529276---835140001--0000000005-----7683067007----------------716a605-----------------64174------012828503810680676---300005---2-0454----810100000416-67703200000031-----------------------------8--508727288106304--------------51064027422872a4----------------- >P1;d2lb9a1 --------------------------------------27a5066106802751-----802000012129--833040200136d7------717324a-------------65273d42666515102322500022--396a---27---27--868------------------a6b297077986169------522045932730652------------------------9020011000248--a60300020022------------------------------44692699515402------------------620470072006149------------------ >P1;d2o9aa2 -----------------------------------8992274035105800660-----60-00000303787-52020320030a--------------4a7314275---745111100--0000000022-----6976035306----------------65--b07-----------------53193------024449703620450483---610104---2-0256----521000100313-79723000000014-----------------------------7--205994196007002--------------70074039326a65------------------- >P1;d2oola1 ----------------977a5276216203650590962650051000003500-----60200001306b--823030100135a-------b173147-------------67264822489218212623110135--093-----9---59--849-----------666368878739336469-----------25168941840681------------------------7040101000229--a70100020006------------------------------74460568206102------------------500710270015158787--------------- >P1;d3mmha- ------a5827192a-73331062015106610565571750056004002700-----701000002037-94720311224249-------------------------04740453--5000030136452120--640882-----------------------------------84035229--------------------------------------------------605000000031-8b-80100000104------------------------------74730592037104------------------5006202722431583c---------------- >P1;d3nhqa3 ------------------------------------------------------------------------------------------------------------------------8686436405721------72046206889511a002-37930012006040000126--------------b823115780-6910850175068558532142362------------801000001036974000000155373866aaba74a6aa379-----------74867296254534578------178405706a102500560162046128--------------- >P1;d3obfa1 -------------------------------------73691053005501781-----10-0000-4164---62-003111508----------5---26871-056---a36345021--0000000482-----8464037005----------------674061a---------------------c------279306700730760-a4---810203---0-314a----730000030326-768-3000100003-----------------------------7--2077a5067008302--------------8007501840a08-------------------- >P1;d3rfba- ---------------b734440760074048406c46204500570041037316----402000001248---8203122242ab-------------------------03740634--6000020066480220--130783-----------------------------------a4135239--------------------------------------------------705000000024-aa-80100000103------------------------------55730763047204------------------600620173072538457--------------b >P1;d3zq5a3 ----------------------------------------------------------------------------------------------------------------------------34a704712------720374057296105002634a-301500505000020b--------------b514216800867206600720376-a3a1341210185178058137200000000059--810000003145335649022a6463476c9855649487a----------------876665263306606830160023027103723776789---------- >P1;d4cqha2 ------------------------6698058305-1774830062006102810-----900000014049--722030200025a-------c184247-------------56364921479225212644012134--076-----a---69--859-----------684379695738425429-----------26168941640392------------------------a010101000229--990100010015------------------------------7538056a327203------------------300610152056--------------------- >P1;d5m82a1 --------------------------------------3695057104502660-----901000014049--714063111011b-------726507614--------88583695472475601504966224042--0383---b1---8--------------------------------------------------b431311530------------------------6030001000106--a70100000010a-----------------------------641a06a7037203------------------500860063046465888------------978 >P1;d5viqa2 ------------------64819a638502640570a62440041004002400-----602000013028--6430301002149-------b375157-------------46254851477108212622000042--053-----a---59--84a-----------675279487659327458-----------25168a41640471------------------------903000200002c--990200020013------------------------------83230787014304------------------6002500830382a------------------- >P1;d6p58a- ---------------------------------578832471057006603930-----90100000006b--a31030200213b-------b2390a--------------56241441366415302874352150--0583---d2---9--------------------------------------------------9922921660------------------------4020100000216--9902000000106-----------------------------532805a8227403------------------71067006503847------------------- >P1;d6xhha- ---------------------389218303530764a73941041006002620-----90200000504a--3120404101149-------b26804b-------------51251771385601303744010022--057----00---11--059-----------75038--------------949------477089831730471------------------------2040001000116--a600000000105-----------------------------54270545104001------------------400430061038477------------------ >P1;d7ckva1 ---------------------------------------998155103500750-----800000012039--7510712001158-------92430384----------a4995814---78327403638021053--0548------------------------------------------------------92a01a836a30670------------------------804000000035----801000100106-----------------------------662804b8137303------------------61058028528---------------------- Translating the sequences **************************************HHHHHHHHHHHHHHHH*****C**EEEEEEE*C***C*EEEEEEE*CC-------------------------**CEE***--**HHHHHHHHCC****--******-----------------------------------********--------------------------------------------------*C*EEEEEEEE*C**-*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHH***--------------------- -------------------------------------*HHHHHHHHHHHHHH**-----CC-EEEEEEE*C---C*EEEEEEE*CC----------*----********---*CEE*****--HHHHHHH*CC-----**********----------------**--***-----------------*****------*****HHHHHHHH*****---******---*-****----C*EEEEEEEE*C-*C*EEEEEEEEE**-----------------------------*--*CCHHHHHHHH****--------------HHHHHHHHH***--------------------- --------------******************-----*HHHHHHHHHHHHHHH*-----C**EEEEEEE*C*-*C*EEEEEE*****------*-----------------***EE***--***HHHHHHHCC*-**--*****------------------------------------*************---------------------------------------------*C**EEEEEEE*C**C*EEEEEEEEE**-----------------------------C**CCC*HHHHHHH****----------****HHHHHHHHHH*********************** -------------------------------------****HHHHHHHHHHHHH-----C**EEEEEEE*C---C*EEEEEE*****------*------**--------***CEE***--**HHHHHHHHCC****--******-----------------------------------*************---------------------------------------------*C**EEEEEEE*C*-C*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH*------------------HHHHHHHHH**************--------- -----------------------***************HHHHHHHHHHHHHHHH-----CC-EEEEE***-**-*****EEEE**C***********---*************C******---HHHHHHHH*C-----************---****************************************------*****HHH***HH**************---**********C*EEEEEEEE*C-*-*EEEEEEEEE**-----------------------------C---CCHHHHHHHH****--------------HHHHHHHHH**---------------------- -------------------------------------*HHHHHHHHHHHHHHHH-----CC-*EEEEEE*C---C*EEEEEEE*CC----------------------*---*CEE*****--HHHHHHHHCC-----**********----------------**--***-----------------*****------*****HHHHHHHH*****---******---*-****----C*EEEEEEEE*C-*C*EEEEEEE****-----------------------------C--CCCHHHHHHHH****--------------HHHHHHHHH***--------------------- -----------------------------------***HHHHHHHHHHHHHHHH-----CC-EEEEEEE*C---C*EEEEEEE*CC----------*---*********---*CEE*****--HHHHHHHHCC-----**********----------------*******-----------------*****------*****HHHHHHHH*****---******---*-****----C*EEEEEEE**C-*C***EEEEEEE**-----------------------------*--***HH*HHHHH****--------------HHHHHHHHHH******----------------- --------------------------------------*HHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC*------*******-------------CEE*******HHHHHHHHCC******--****---**---**--***------------------***************------*****HHHHHHHH**------------------------*C*EEEEEEEE*C--C*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH*****------------------ -----------------------------------***HHHHHHHHHHHHHHHH-----CC-EEEEEEE*C**-C*EEEEEEE*CC--------------*********---*CEE*****--HHHHHHH*CC-----**********----------------**--***-----------------*****------*****HHHHHHHH*****---******---*-****----C*EEEEEEEE*C-*C*EEEEEEEEE**-----------------------------C--CCCHHHHHHHH****--------------HHHHHHHHHH****------------------- ----------------**********************HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*******-------------CEE*******HHHHHHHHCC******--***-----*---**--***-----------******************-----------****HHHHHHHH**------------------------*C*EEEEEEEE*C--C*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH********--------------- ------*********-**********************HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C-**C*EEEEEEE*CC-------------------------**CEE***--**HHHHHHHHCC****--******-----------------------------------********--------------------------------------------------*C*EEEEEEEE*-**-*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH*******---------------- ------------------------------------------------------------------------------------------------------------------------***HHHHHHHH**------******************-********************--------------**********-*HHHHHHHH****************------------***EEEEEE****C*EEEEEEE*********************-----------*C***C*HHHHHHHH**------**********HHHHHHHHHH********--------------- -------------------------------------*HHHHHHHHHHHHHHHH-----CC-*EEE-***C---C*-***EEE*CC----------*---*****-***---*C*******--HHHHHHHHCC-----**********----------------*******---------------------*------*****HHHHHHHH**-**---******---*-****----C*EEEEEEEE*C-*C*-EEEEEEEE**-----------------------------*--*CCHHHHHHHH****--------------HHHHHHHHH****-------------------- ---------------***********************HHHHHHHHHHHHHHH**----C**EEEEEEE*C---C*EEEEEEE*CC-------------------------**CEE***--**HHHHHHH*CC****--******-----------------------------------********--------------------------------------------------*C*EEEEEEEE*-**-*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHH**********--------------* ----------------------------------------------------------------------------------------------------------------------------*HHHHHH**------**********************-****************--------------************HHHHHHHH*****-*************************EEEEEE*C*--*EEEEEEE*********************************----------------****************HHHHHHHHHH*************---------- ------------------------**********-***HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*******-------------CEE*******HHHHH***CC******--***-----*---**--***-----------******************-----------****HHHHHHHH**------------------------*C*EEEEEEEE*C--C*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH**--------------------- --------------------------------------*HHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*********--------***C************HHHHHCC******--****---**---*--------------------------------------------------HHHHHHHH**------------------------***EEEEEEEE*C--C*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH********------------*** ------------------********************HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*******-------------CEE*******HHHHHHHHCC******--***-----*---**--***-----------******************-----------****HHHHHHHH**------------------------*C*EEEEEEEE*C--C*EEEEEEEEE*------------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH****------------------- ---------------------------------*****HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------******--------------CEE*******H*HHHHH*CC******--****---**---*--------------------------------------------------HHHHHHH***------------------------*C*EEEEEEEE*C--C*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH****------------------- ---------------------*****************HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*******-------------CEE**********HHHHHCC******--***----**---**--***-----------*****--------------***------*****HHHHHHHH**------------------------*C*EEEEEEEE*C--C*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH*****------------------ ---------------------------------------*HHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------********----------**C*****---*HHHHHH**CC******--****------------------------------------------------------*****HHHHHHHH**------------------------*C*EEEEEEEE*----*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH------------------HHHHHHHHHH*---------------------- 55781.tem _________________________________ ---------------------*****************HHHHHHHHHHHHHHHH-----CC*EEEEEEE*C--*C*EEEEEEE*CC-------*********---------**CEE*******HHHHHHHHCC*****************---**--***----**--********----*************------*****HHHHHHHH*****---******---*-****---*C*EEEEEEEE*C**C*EEEEEEEEE**-----------------------------C**CCCHHHHHHHH****--------------HHHHHHHHHH********--------------- Structural block scores 0 20 - 4.7 H 6.5 75.0 51.9 75.0 75.0 75.0 75.0 75.0 75.0 59.0 28.4 75.0 75.0 55.2 75.0 75.0 75.0 65.1 75.0 75.0 75.0 21 37 * 3.6 M 4.1 71.2 25.6 70.9 12.9 71.2 63.3 75.0 63.3 4.1 3.3 75.0 71.0 4.1 75.0 21.5 75.0 4.9 54.8 4.7 75.0 38 53 H 4.7 H 1.9 3.2 1.6 2.6 2.0 3.2 2.6 4.2 3.1 1.7 2.3 75.0 3.4 2.5 75.0 2.6 3.7 1.6 3.3 2.4 8.3 54 58 - 4.9 H 3.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 61.2 75.0 75.0 75.0 75.0 75.0 75.0 75.0 59 60 C 4.5 M 3.0 1.0 2.5 2.5 3.5 5.0 0.0 4.0 3.0 3.0 3.5 75.0 0.5 2.0 75.0 4.5 4.5 3.0 4.5 4.5 4.0 62 68 E 4.7 H 0.1 0.6 0.6 1.0 0.4 0.7 0.6 0.6 0.4 0.6 0.3 75.0 11.4 0.4 75.0 0.7 0.7 0.6 0.0 0.7 0.4 71 72 - 4.5 M 8.8 75.0 41.0 75.0 6.0 75.0 75.0 75.0 7.5 75.0 42.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 76 82 E 4.7 H 1.9 0.9 0.7 1.9 2.3 1.1 0.4 1.0 1.0 0.7 1.9 75.0 11.6 2.0 75.0 0.7 1.7 0.9 1.0 1.4 1.6 84 85 C 4.5 M 8.8 3.5 5.5 5.5 3.5 6.0 2.0 9.8 5.2 7.8 6.5 75.0 4.0 11.0 75.0 7.8 6.2 6.5 7.2 6.5 6.5 86 92 - 4.8 H 75.0 75.0 64.4 64.4 4.0 75.0 75.0 65.3 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 93 101 * 3.7 M 75.0 60.1 68.1 52.6 25.8 75.0 52.3 20.5 59.9 20.5 75.0 75.0 51.4 75.0 75.0 20.9 4.2 21.1 29.0 21.4 12.0 102 110 - 4.4 M 75.0 19.1 75.0 67.6 3.2 67.1 20.3 75.0 19.9 75.0 75.0 75.0 28.0 75.0 75.0 75.0 67.6 75.0 75.0 75.0 75.0 111 112 * 3.3 M 1.0 42.0 6.8 4.5 4.5 41.5 41.5 75.0 41.0 75.0 2.0 75.0 42.8 1.5 75.0 75.0 6.5 75.0 75.0 75.0 7.2 114 115 E 4.3 M 2.0 2.0 2.0 2.5 5.5 5.0 3.0 3.5 3.0 4.5 2.0 75.0 4.5 2.0 75.0 4.5 4.5 4.0 4.0 1.5 7.0 116 122 * 2.3 P 23.7 22.0 24.6 23.9 35.0 21.9 22.1 5.9 21.9 4.9 23.9 46.0 23.1 24.1 75.0 4.7 5.4 4.9 3.3 4.6 35.0 123 130 H 4.7 H 1.6 0.0 2.6 2.0 3.4 0.0 0.0 2.9 0.0 3.9 1.6 4.4 0.5 1.8 13.8 3.6 3.8 3.4 3.6 3.1 4.1 131 132 C 4.7 H 5.5 1.5 5.5 4.5 2.5 1.5 2.5 2.0 2.0 2.5 4.5 1.5 5.0 6.0 1.5 4.0 6.0 2.0 5.5 4.0 5.5 133 149 * 2.8 P 32.5 33.4 41.0 32.8 24.3 33.7 33.5 24.8 33.5 32.8 32.8 29.5 33.1 32.4 29.2 32.9 24.4 32.3 24.9 27.5 32.5 150 152 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.3 75.0 75.0 2.3 75.0 75.0 75.0 75.0 75.0 75.0 153 154 * 3.6 M 75.0 75.0 75.0 75.0 7.5 75.0 75.0 4.5 75.0 7.0 75.0 5.2 75.0 75.0 2.5 7.5 41.5 7.0 42.0 1.0 75.0 155 156 - 4.6 H 75.0 75.0 75.0 75.0 3.5 75.0 75.0 75.0 75.0 75.0 75.0 1.0 75.0 75.0 1.0 75.0 75.0 75.0 75.0 75.0 75.0 157 159 * 3.9 M 75.0 75.0 75.0 75.0 8.2 75.0 75.0 7.3 75.0 7.0 75.0 28.3 75.0 75.0 4.3 7.3 75.0 7.5 75.0 4.7 75.0 160 163 - 4.6 H 75.0 75.0 75.0 75.0 2.5 75.0 75.0 75.0 75.0 75.0 75.0 3.0 75.0 75.0 22.1 75.0 75.0 75.0 75.0 75.0 75.0 164 165 * 3.8 M 75.0 4.0 75.0 75.0 1.0 5.8 4.0 75.0 5.5 75.0 75.0 1.5 6.5 75.0 3.0 75.0 75.0 75.0 75.0 75.0 75.0 166 167 - 4.3 M 75.0 75.0 75.0 75.0 4.0 75.0 8.2 75.0 75.0 75.0 75.0 0.0 2.0 75.0 0.0 75.0 75.0 75.0 75.0 75.0 75.0 168 175 * 3.9 M 75.0 49.0 75.0 75.0 3.8 48.9 48.2 75.0 49.2 31.5 75.0 1.4 49.1 75.0 1.5 31.6 75.0 31.5 75.0 31.0 75.0 176 179 - 4.2 M 75.0 75.0 75.0 75.0 1.8 75.0 75.0 41.6 75.0 7.8 75.0 39.5 75.0 75.0 40.4 7.2 75.0 7.0 75.0 75.0 75.0 180 192 * 3.5 M 32.1 47.7 3.7 4.4 5.3 48.1 47.8 6.3 47.8 26.9 31.4 70.1 70.2 31.7 70.1 26.5 75.0 26.8 75.0 59.4 75.0 193 198 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.3 75.0 75.0 3.2 75.0 75.0 75.0 75.0 75.0 75.0 199 203 * 2.9 P 75.0 3.2 75.0 75.0 1.8 1.8 2.6 2.6 2.8 17.8 75.0 19.2 4.2 75.0 4.4 18.0 75.0 17.8 75.0 5.2 4.5 204 211 H 4.4 M 75.0 3.6 75.0 75.0 4.8 4.1 3.9 4.4 3.9 5.0 75.0 3.9 3.8 75.0 3.5 4.4 3.7 4.7 5.0 4.4 5.9 212 216 * 3.2 M 75.0 3.8 75.0 75.0 2.4 4.0 5.4 46.4 4.0 46.8 75.0 4.8 19.1 75.0 3.6 47.2 45.6 46.6 46.2 46.6 46.4 217 219 - 4.7 H 75.0 75.0 75.0 75.0 5.8 75.0 75.0 75.0 75.0 75.0 75.0 6.0 75.0 75.0 29.5 75.0 75.0 75.0 75.0 75.0 75.0 220 225 * 3.8 M 75.0 2.2 75.0 75.0 4.2 1.5 1.3 75.0 2.0 75.0 75.0 2.5 2.3 75.0 3.6 75.0 75.0 75.0 75.0 75.0 75.0 226 228 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 27.7 75.0 75.0 0.7 75.0 75.0 75.0 75.0 75.0 75.0 231 234 * 4.0 M 75.0 3.5 75.0 75.0 4.2 3.5 3.2 75.0 3.2 75.0 75.0 75.0 4.6 75.0 4.0 75.0 75.0 75.0 75.0 75.0 75.0 235 237 - 4.8 H 75.0 75.0 75.0 75.0 5.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.7 75.0 75.0 75.0 75.0 75.0 75.0 241 248 E 4.9 H 0.4 0.2 0.6 0.4 0.9 0.5 0.6 0.5 0.6 0.5 0.4 0.2 0.8 0.2 0.0 0.5 0.2 0.2 0.4 0.2 0.4 251 252 * 3.6 M 8.0 43.2 8.0 41.5 42.8 41.0 40.5 75.0 41.0 75.0 9.8 7.5 41.0 10.5 42.0 75.0 75.0 75.0 75.0 75.0 75.0 255 263 E 4.9 H 0.2 0.2 0.6 0.6 0.7 0.3 0.6 0.8 0.6 0.3 0.2 1.2 8.8 0.2 0.6 0.3 0.2 0.6 0.3 0.1 0.3 264 265 * 1.9 P 39.0 2.5 4.5 2.5 2.0 4.0 2.0 38.5 2.5 40.5 39.5 5.0 1.5 39.0 4.5 40.0 5.2 39.0 3.0 2.5 3.0 266 294 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 33.3 75.0 75.0 5.8 75.0 75.0 75.0 75.0 75.0 75.0 296 297 * 2.7 P 6.0 75.0 7.5 4.5 75.0 75.0 75.0 5.0 75.0 4.0 5.5 7.0 75.0 6.0 75.0 4.0 2.5 2.5 2.5 3.0 4.0 298 300 C 4.6 H 2.7 3.3 4.7 4.3 28.0 4.7 4.3 5.7 2.3 3.7 2.7 6.0 3.0 3.3 75.0 4.3 5.5 3.3 4.3 4.0 4.0 301 308 H 4.9 H 2.9 4.7 3.5 3.8 3.1 3.9 4.4 4.4 4.8 3.1 3.2 4.2 4.4 3.2 75.0 4.2 4.1 3.4 4.6 1.9 4.6 309 312 * 3.8 M 75.0 3.2 1.8 58.0 1.8 2.5 3.2 75.0 2.2 75.0 75.0 41.2 3.2 75.0 41.2 75.0 75.0 75.0 75.0 75.0 75.0 313 326 - 4.8 H 75.0 75.0 54.6 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 24.9 75.0 75.0 4.5 75.0 75.0 75.0 75.0 75.0 75.0 327 336 H 4.9 H 2.6 2.8 3.9 9.7 3.5 3.1 3.1 2.8 3.5 2.2 2.6 2.0 3.3 2.5 1.7 1.8 2.8 2.4 3.2 1.8 3.7 337 344 * 2.8 P 57.1 57.9 5.9 6.2 66.4 57.8 22.9 30.6 40.9 5.2 13.9 3.6 49.2 5.1 3.8 57.6 6.1 40.4 40.2 31.8 66.6 345 359 - 4.8 H 75.0 75.0 7.1 48.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 70.8 52.5 75.0 61.6 75.0 75.0 75.0 75.0 >>>>>>