Reading input alignment file to find conserved blocks of secondary structure The input structure based alignment from Comparer _____________________________________________ >P1;d1p6oa- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCC------CCHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEECC----CCCEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHCC----CC------HHHHC-----CEEEEEEECCC-------HHHHHHHHH-HCCC---EEEEEEC-CCCCC----------CHHHHHHHC------------CCEEEECC---CHHHHHHH--HHHHHHCHHHHHHHCC----C >P1;d1r5ta- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCH------HHHHHHHHHHHHHHHHCCCCCCC--CCEEEEEECCC------CCEEEEECC----CCC-----------------C------------------------HHHCCCHHHHHHHHHHHC---CCC-C-------C-----CCEEEEEECCCCCCCCCCHHHHHHHHC-CCCCC--CEEEEEC-CCCCCEEEEEHHHHCC--------------------------------------------------CCCCHHHC---C >P1;d1thza2 -----CCCEEEECCCCCCCCCCEEEECCCC------------CCCEEEEE------CCCCHHHHHHHHHHHHHHHHHH--HHHCCCEEEEEECCEEEEEEECCCCCHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCC---HHHHHHHHCCHHHCCEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHCC--CCCCCCCCCHHHHHHHHHHHHH---HHCCCCCCEEEEEC-------CEEEEECCCCC---CHHHHHHHHHHHHHHHHHCCCHHHHCCEECCCCC-HHHHHHHHHHHHCCCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCC------CCHHHHHHHCCC----EEEEEEECC------CC-----CHHHHHHHHHHCCCEEEEEC---C--CCCCC----------------------------------- >P1;d1vk9a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCHHHHH---HHC---CCCEEEEC-------CCEEEEECCC-------------------------------------------------------------------------CCCHHHHHHHCCCCCCCEEEECCC---------HHHHHHHHC-C----CCEEEEEEE------E--------HHHHHCC-CCCCCEEEEE---EECCCCCCCCCHHHHHHHCCCCCHHHHHCCC------------ >P1;d1vq2a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHCCC--CCC--CCCCEEEEEEC------CEEEEEEECCCCCCCCC---------------HHHHHHHHCCEECCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHH-----------CCCCC-----CCEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEECCCCCC-----------CCCHHHHHC------------CCEEEECCHHHC-CCCCHH--HCCCCCCC------------- >P1;d1wkqa1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHHHH--HHCCCCCCCEEEEEEC------CEEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HCCCCCC-----------CCEEEEEECCC-------HHHHHHHHH-HCCC---EEEEEECHHHHHHCCC-------CHHHHHHHH-----CCCHHHCCCCCCCCCC--CCCCHHHH--HHHHCC----------CCCCC >P1;d1wwra1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEEC------CEEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HC----CCC--CC-----CEEEEECCCCC-------HHHHHHHHH-CCCC---EEEECCCCCC-----CCCCCCCCCHHHCC-----------CCCCCCEEEECCC---HHHHHHH--HHHHHHHHHCCC--------- >P1;d1zcza2 CCCCCCEECCCCCCCCCCC-CCCCEE----------------CCCEEEECC----CCCCCHHHHHHHHHHHHHHHCCC------CCEEEEEECCEEEEEEECC--------------------CHHHHHHHHHHHC-CCCCCEEEEECCCCCHHHHHH-CCCCEEEEECCCCC---HHHHHHHCC----CCEEEEEC---CCCCEEEEEECCEEEEEECCCCCC------CCEEEECC---CCCCHHHHHHHHHH---HHHC-CCCEEEEEC-------CEEEEEECCCC---CHHHHHHHHHHHHHHHHC------------------------------------------------------------------CCEEEECCCCC------CHHHHHHHHHCC----CCEEEECCC------CC-----CHHHHHHHHHHHCCEEEECC---C--CCCCC----------------------------------- >P1;d2a8na1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEEC------CEEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HC----CCC--CC-----CCEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEECCCC-----CCCCCCCCCHHHCC-----------CCCCCCEEEEC----------------------------------- >P1;d2fr5a- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------HHHHHHHHHHHHHHCCCCCCCCC--CCEEEEEEECC------CCEEEEECC----CCC-----------------C------------------------HHHCCCHHHHHHHHHHHC---CCC---------C-----EEEEEEEECCCCCCCCCCHHHHHHHHH-CC-CC--CEEEEEC-CCC-CEEEEEHHHHCC--------------------------------------------------CCCCHHHHCCCC >P1;d2g84a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCCCCCHHHHHHHHCCCCC------CCHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEECC----CCCEEEEEECCCCCC---------------------------------------------CCCCCCHHHHHHHHHHHH---HCCCCCC-CCCCC-----CEEEEEEECCC-------HHHHHHHHH-HCCC---EEEEEECHHHHHHCCCCCCCCCCCHHHHHHH------------CCCEEECCCC--HHHHHHHH--HHHH-HHCCCCCCCCC----- >P1;d2hxva2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCHHHHHHCCCCC---CCC--CCCCEEEEECC-------CCCEEEECCCC-------------------------------------------------CCCCCC-CCHHHHHHC-----------CCCCC-----CCEEEEEECCCCCCC--CCCHHHHHHH-HCC----CEEEEECCCC----------CCCCHHHHHHCC------------CCCEEECCCCCC-CCHHHH--HHHHCC--------------- >P1;d2nx8a- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCCH------HHHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEEC------CEEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HC----CCC--CC-----CEEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEECCCC-----CCCCCCCCCHHHCC-----------CCCCCCEEEECCC--HHHHHHHH--HHHHHHHHHHHHHHHHHHHC- >P1;d2nyta1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCCHHHHHHCCCCCCCCC---CCCCCEEEEEEEEEECCCCCEEEEEEEEEEC------CCCCCHHHHHHHHCCC-CCCCCCEEEEEEEEEECCCHHHHHHHHHHHH----------------------------HCCCE-EEEEEEEECCCCC----CHHHHHHHHHHH---HCCCEEEECC---------------HHHHHHHHHHHCCCC---------CCCCCCCHHHHHHHHHH--HHHHHHC-------------- >P1;d2pw9a1 -----------------CCEEEEEEEEECCCCEEEEEEEEECCEEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCEEEEEEC--CCCHHHHC-------------------------------------------------------------------------------------------------------------------CCCCCCCCCEEHHHHHHHHHHHHCCCCHH---HHHCCCEEEEEEEC-------CEEEEEEE-EC---CHHHHHHHHHHHHHCC----------------------------------------------------------------CCCCCCEEEECCCCC-------HHHHHHHHHHC----CCEEEECCC------CC-------HHHHHHHHHHCCEEEEEE---ECCEEEEEEC-------HHHEE--------------------- >P1;d2w4la- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCC------CHHHHHHHHHHHHHCCC--CCC--CCCCEEEEECC-----CCCEEEEEECCCCCCCCC-----------------C----------CCCCCCCCCHHHCCCCCCCCHHHHHHHC-----------------CCC-----CCEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEEC-CCCCC------HHHHHHHHHHHHH------------CCEEEECCCCCC-------------CCCCC--------HHHC >P1;d2z3ha- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------HHHHHHHHHHHHHHHHCCCCCC---CCEEEEEEECC------CCEEEEECC----CCC-------------------------------------------CCCCCHHHHHHHHHHHC---CCC---------C-----EEEEEEEECCCCEEECCCHHHHHHHHHHCC--C--CEEEEEC-CCC-CEEEEEHHHHCC--------------------------------------------------C----------- >P1;d3v4ka- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCC-----HHHHHHHHCCCCCC---CCCCCCEEEEEEEEECCCEEECCCCEEEECCCCC-CCCCCCCHHHHHHHHHHH-CCCCCCCEEEEEEECCCCCHHHHHHHC-CCC-----------------------------CCCE-EEEEEECCCCCC-----CCCHHHHHHHHC----CCCEEEECC---------------HHHHHHHHHHHCCCC-------CCCC-CCCCCC-CCC-HHH--HHHHHC--------------- >P1;d5tkma- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCEE-----HHHHHHHHCCCCCC---CCCCEEEEEEEEEEEECCEEEEEEEEEEEEECCC-C--HHHCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHH----------------------------HCCCE-EEEEEEEECCCCC----HHHHCCHHHHHH---HCCCEEEECC---------------HHHHHHHHHHHEECC-------CCCCCCCCCHHHHHHHHHH--HHHHHCC-------------- >P1;d6k63a1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCHHHHH----CCCHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHCC------CHHHHHHHHHHHHHCCCEECCCC--CCCEEEEEECC------CCEEEEECE----ECC---------------CCC------------------------HHHCCCHHHHHHHHHHHC---CCC---------C-----EEEEEECC-------CCCHHHHHHHCCCCCHHH--CEEECC-------------------------------------------------------------------------------- >P1;d6k63a2 ---------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCHHHHCCCCCCHHHHCCCCCCCC--------------------------------------------CCCCCCC------CCCCHHHHHHHHHHHCCCCCCCC--CCEEEEEEECC------CCEEEEECC----CCC-----------------C------------------------CCCCCCHHHHHHHHHHHC---CCCHH-------H-----EEEEEEEECC-CCCCCCHHHHHHHHHH-CCCC---CCEEEEC-C----------------------------------------------------------------------------- >P1;d6kw6a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHCCCCCCCCC--CCEEEEEEECC------CCEEEEECC----CCC-----------------C------------------------HHHCCCHHHHHHHHHHHC---CCC---------C-----EEEEEEEEC-CCCCCCCCHHHHHHHHH-HHCCC--CEEEE---CC----EEEEHHHHCC--------------------------------------------------CC---------- >P1;d6l2la1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCHHHHHHHHHHHHHH--HHHC-CCCCEEEEECC-----CCCEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HC------CCCCC-----CCEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEECCCCCCC----------CCC------------------CCEEEECCHHHHHHHHHHH--HHHHHHHC------------- >P1;d7nz9a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHH------CCHHHHHHHHHHHHHHH--HHCC-CCCCEEEEEEC------CEEEEEEECCHHHH---------------------------------------------CCCCCCHHHHHHHHHHHH---HHHCCCCHHHHHC-----CEEEEEEECCC-------HHHHHHHHH-CCCC---EEEEEECCCC-----CCCCCCCCCCCCCC---------CCCCCCCCEEECCCC--HHHHHHHH--HHHHHCC-------------- PSA >P1;d1p6oa- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3d7862------82184004102700150--2748-000000000217----605123400021216---------------------------------------------a187210020007509a----28------79405-----40000000001-------740072007-3403---0000002-61151----------a01750374------------90303245---15402700--560265349304601a----9 >P1;d1r5ta- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------60bc059------82085028203700680603357--44100000068------552232015----157-----------------7------------------------7a7343001200560174---928-7-------9-----040000002298811505870253016-20969--0100000-2718526233036027--------------------------------------------------a0637a57---e >P1;d1thza2 -----c734160841556855915261939------------60104222------2607332030042002002204--611932000003821010000028086600300104512a60460000000000030640720000003601210050033160400001305---a7038203815b5700004054a37386755757a98576751543804691097--120736a057600200000000---00002010000024-------0000000263a---421700550063022010001630180515bb18-485106011400467088aa7289046206631840787327712760840000000302------834003004602----050000047------0b-----3296017003527000001b---2--60228----------------------------------- >P1;d1vk9a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2c42404930---895---90100003-------582113167a-------------------------------------------------------------------------b1001703763a516900001501---------100100017-6----050010630------0--------5101606-74a1614367---427534395a283093049a91019502754------------ >P1;d1vq2a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------49434000300620270--501--01110000049------482204141205bd554---------------046206749015964007832940381193034004301550885-----------93807-----50100000001-------770063019-1305---30010352550a-----------521750693------------a07054143850-870739--80714104------------- >P1;d1wkqa1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------57574017405400760--496a413410000029------87221302122855---------------------------------------------a37503000201550196---2a46208-----------70300000200-------030563087-0506---5234446365038694-------713553716-----8465772793669786--b7665677--849879----------a2887 >P1;d1wwra1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5a455004101600550--3647-04000000039------78200411002655---------------------------------------------847502002201730275---3a----473--06-----60300001001-------440051006-0405---2000002278-----70004146720358-----------81b3607233351---8506621--66166367886c--------- >P1;d1zcza2 b858595491908406568-480525----------------53417231a----a4404351240041011004601------4400000294301000058--------------------7334005400515-550720000010403480063-08240200003403---860272058----51000309---b370535865a97373760711a8------b1732159---60934510300010---0000-020000038-------12001001816---506500620155098706------------------------------------------------------------------60000001403------525003201726----040000019------09-----428602620572a0000401---6--50318----------------------------------- >P1;d2a8na1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------884a5025105421650--3948-06520000039------67020500032764---------------------------------------------a3a503001101740196---3a----4a5--05-----70000002003-------630032007-0205---3010384178-----80005286610748-----------90843052619----------------------------------- >P1;d2fr5a- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------56------92064018306711780613358--41100000038------650041115----257-----------------6------------------------777233002200650274---836---------9-----050000006489731405850243015-27-28--0300002-376-613354076126--------------------------------------------------a1702747977a >P1;d2g84a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5ca58528119105802858352------86664006000600620--2839-010100000247----604000000112925---------------------------------------------929503002000630286---2a29304-4bb13-----20000000001-------440152018-0304---0000004191048193803915a91348058------------6707061214--4a601610--7725-835aa994692----- >P1;d2hxva2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------47a2303700550477---054--3101000003a-------82103230265-------------------------------------------------905400-100440485-----------93608-----b01000000011579--7500020017-050----1000003025----------807800530585------------b06033225406-107802--361468--------------- >P1;d2nx8a- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------c5874167------95136005001600540--2834-04010000039------48000301006663---------------------------------------------a59513002201750386---2a----564--06-----90000000001-------530061008-0404---0000024298-----7000324651052a-----------96a0902024612--4a606711--82165247648977877969- >P1;d2nyta1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------082c295024004730400069---aa53300001116080a8a57648462345a------7173100230178215-9058706060100020000560074028206----------------------------82820-4020101401426----578035104604---72a0405004---------------172044005300659---------a0760950474065156--2067109-------------- >P1;d2pw9a1 -----------------a316656642569c8686584350253603000576416624001340400000100022408648206605247924000307--a22a9148-------------------------------------------------------------------------------------------------------------------b09902a1303473035006603832704---64086030000009-------45122000-01---7231000000001019----------------------------------------------------------------405450000000502-------21000000201----000000533------05-------a50260058080000040---5376051421-------68106--------------------- >P1;d2w4la- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------c97a54------56205003105710870--505--45410000039-----7471214020104cc452-----------------a----------8221659378750052201500330176-----------------816-----70200012002-------270054028-2505---2000341-775a4------a606502840782------------a06255092759-------------83766--------aa7a >P1;d2z3ha- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------17------a5154027504720673973a6---52200000065------451123115----759-------------------------------------------66243001300950884---a0b---------9-----0500000017b4703305850263036616--c--0500154-a97-733034076127--------------------------------------------------b----------- >P1;d3v4ka- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------506-----37305600203585---8909311001001447a82644743432126868-789825500220054058-006893603010000200217006601-207-----------------------------4800-601030000424-----986034005502----390805005---------------472043014100639-------9680-41b909-208-144--607802--------------- >P1;d5tkma- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------815a306-----3a203610203191---ab27300000002149aa6365543000413067-7--27600013019104860194b66020100000000270066027107----------------------------83830-7020000001405----b81356002603---8290702003---------------582045007400618-------b690722b60a70365057--2076025-------------- >P1;d6k63a1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------bb5408a127----60796038106610867904200458205502840a3------84550024003002110603558--64200000046------740000014----146---------------b47------------------------796133002200420875---a09---------4-----04000046-------605850684059282599--073234-------------------------------------------------------------------------------- >P1;d6k63a2 ---------------------------------------------------------------------------------------------------------------------------------------------------------e78b28895657b454386482853595--------------------------------------------a173828------29867024200600170001018--00000002066------851121201----050-----------------5------------------------7b5163004301740575---a2837-------2-----0640100034-9076313980374067-2717---6083350-8----------------------------------------------------------------------------- >P1;d6kw6a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------37176047405601770604359--53100002056------931032215----257-----------------7------------------------8c7263001601840585---a15---------5-----050000003-70612306750263027-1015a--04000---97----9344055127--------------------------------------------------b1---------- >P1;d6l2la1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------a716b107400720450--4748-04000000029-----967230312012745---------------------------------------------948432001200740195---3b------58604-----80300002004-------430153048-0606---00210022942a2----------b37------------------a071540087116502710--66026867------------- >P1;d7nz9a- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------539403------74285006200500540--1868-03000000026------46200311022664---------------------------------------------868622002100550362---0975a46477002-----40000000000-------440032005-2303---2000005185-----7000524661053a---------37a326509154632--3a503610--6411876-------------- Translating the sequences ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------***HHHHHHHHHHH***--**CC-*CC*EEEEE***----****EEEEECC****---------------------------------------------***CCC*****HH****----**------*****-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C-*****----------*********------------********---********--****************----* ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*******------***HHHHHHHHHHH*******CC--CC*EEEEE***------**EEEEECC----***-----------------*------------------------***CCC*****HH*****---***-*-------*-----**EEEE**CCC*******HHHHHHHH*-*****--*EEEE*C-****************--------------------------------------------------********---* -----*************************------------********------**********************--*********************************************************************************************---*******************************************************--*********HHHHHHHHHH***---**C**CC*EEEEE*-------***EEE**CC*---**********************************-*************CCC*****HH****************************EEEE**CCC------**HHHHHHH***----***EEEE*C------**-----********************---*--*****----------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*****HH***---**C---C**EEEE*-------***EEEE*CC-------------------------------------------------------------------------*****************EEEE**C---------HHHHHHHH*-*----***EEEE**------*--------*******-**********---*******************************------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH***--**C--*CC*EEEEE**------***EEEEECC*******---------------******************************CCC*****HH*****-----------*****-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C*****-----------*********------------************-******--********------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH***--**CC**CC*EEEEE**------***EEEEECC****---------------------------------------------***CCC*****HH*****---*******-----------**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C*********-------*********-----****************--********--******----------***** ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH***--**CC-*CC*EEEEE**------***EEEEECC****---------------------------------------------***CCC*****HH*****---**----***--**-----**EEEE**CCC-------HHHHHHHHH-****---*EEE**C***-----**************-----------*************---*******--************--------- *******************-******----------------*********----***********************------*******************--------------------*************-*********************-**************---*********----********---************************------********---****HHHHHHH***---****-CC*EEEEE*-------***EEEE*CC*---******************------------------------------------------------------------------**EEEE**CCC------*HHHHHHHHH**----***EEE**C------**-----********************---*--*****----------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH***--**CC-*CC*EEEEE**------***EEEEECC****---------------------------------------------***CCC*****HH*****---**----***--**-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C***-----**************-----------***********----------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**------***HHHHHHHHHHH*******CC--CC*EEEEE***------**EEEEECC----***-----------------*------------------------***CCC*****HH*****---***---------*-----**EEEE**CCC*******HHHHHHHHH-**-**--*EEEE*C-***-************--------------------------------------------------************ -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***********************------***HHHHHHHHHHH***--**CC-*CC*EEEEE***----****EEEEECC****---------------------------------------------***CCC*****HH*****---*******-*****-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C************************------------**********--********--****-***********----- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*****HHHHHH*****---**C--*CC*EEEEE**-------***EEEECC**-------------------------------------------------*CCC**-**HH*****-----------*****-----**EEEE**CCC****--***HHHHHHH-***----*EEEE*C***----------************------------************-******--******--------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------********------***HHHHHHHHHHH***--**CC-*CC*EEEEE**------***EEEEECC****---------------------------------------------***CCC*****HH*****---**----***--**-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C***-----**************-----------*************--********--********************- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------********HHHHH*********---*CC*****EEEEE***********EEEEE*C------****************-*******************************----------------------------*****-**EEEE**CCC**----*HHHHHHHHH**---****EEEE*C---------------***************---------*****************--*******-------------- -----------------************************************************************************************--********-------------------------------------------------------------------------------------------------------------------***************HHHHHHHH******---*****C**EEEEE*-------***EEEEE-**---****************----------------------------------------------------------------******EEEE**CCC-------HHHHHHHHH**----***EEE**C------**-------******************---**********-------*****--------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------***HHHHHHHHHHH***--**C--*CC*EEEEE**-----****EEEEECC*******-----------------*----------*****************CCC*****HH*-----------------***-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C-*****------*************------------************-------------*****--------**** --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**------***HHHHHHHHHHH*******C---CC*EEEEE***------**EEEEECC----***-------------------------------------------**CCC*****HH*****---***---------*-----**EEEE**CCC*******HHHHHHHHH***--*--*EEEE*C-***-************--------------------------------------------------*----------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***-----HHHHHHHH******---*CC**C**EEEEE************EEEECC***-******************-***************************-*CC-----------------------------****-**EEEE**CCC*-----***HHHHHHH**----***EEEE*C---------------***************-------****-******-***-***--******--------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*******-----HHHHHHHH******---*CC*****EEEEE***********EEEEE*****-*--***********************************************----------------------------*****-**EEEE**CCC**----*HHH**HHHH**---****EEEE*C---------------***************-------*******************--*******-------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**********----*************************************------***HHHHHHHHHHH*******CC--CC*EEEEE***------**EEEEEC*----***---------------***------------------------***CCC*****HH*****---***---------*-----**EEEE**-------***HHHHHHH********--*EEE**-------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------****************************--------------------------------------------*******------****HHHHHHHHHH*******CC--CC*EEEEE***------**EEEEECC----***-----------------*------------------------***CCC*****HH*****---*****-------*-----**EEEE**CC-*******HHHHHHHHH-****---**EEE*C-*----------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH*******CC--CC*EEEEE***------**EEEEECC----***-----------------*------------------------***CCC*****HH*****---***---------*-----**EEEE**C-C*******HHHHHHHHH-*****--*EEEE---**----**********--------------------------------------------------**---------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHHHHHHH***--***C-*CC*EEEEE**-----****EEEEECC****---------------------------------------------***CCC*****HH*****---**------*****-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C******----------***------------------*******************--********------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------***HHHHHHHHHHH***--**CC-*CC*EEEEE**------***EEEEECC****---------------------------------------------***CCC*****HH*****---*************-----**EEEE**CCC-------HHHHHHHHH-****---*EEEE*C***-----**************---------***************--********--*******-------------- 53927.tem _________________________________ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------***HHHHHHHHHHH***--**CC**CC*EEEEE***----****EEEEECC*******-----------------*------------------------***CCC*****HH*****---***-*-*-*****-----**EEEE**CCC**----*HHHHHHHHH*********EEEE*C******************************------********************--********-**---------- Structural block scores 0 225 - 4.8 H 75.0 74.7 12.0 75.0 75.0 75.0 75.0 22.8 75.0 75.0 69.7 75.0 74.4 75.0 46.0 75.0 75.0 75.0 75.0 62.2 66.2 75.0 75.0 75.0 226 231 * 3.5 M 6.6 6.3 16.8 75.0 75.0 75.0 75.0 52.1 75.0 51.8 5.2 75.0 5.5 75.0 5.2 8.0 51.3 75.0 39.8 4.6 4.8 75.0 75.0 4.0 232 237 - 4.5 M 75.0 75.0 14.7 75.0 75.0 75.0 75.0 4.5 75.0 75.0 75.0 75.0 75.0 16.6 3.6 75.0 75.0 39.3 28.2 75.0 75.0 75.0 75.0 75.0 238 240 * 1.9 P 3.7 3.3 5.5 75.0 5.7 5.7 6.5 75.0 6.7 3.7 6.7 7.2 5.0 4.7 3.3 4.3 5.5 75.0 75.0 5.7 6.3 3.7 6.2 4.3 241 251 H 4.7 H 2.4 3.2 1.8 29.9 1.6 2.9 2.0 2.8 3.2 3.4 2.0 2.6 1.9 2.2 3.3 2.0 3.3 2.6 2.8 1.5 2.5 3.6 3.5 2.4 252 254 * 1.1 P 2.0 4.7 0.0 4.0 3.0 4.3 3.3 0.3 3.7 5.0 2.7 29.7 3.0 5.0 3.7 5.0 5.3 6.0 3.7 0.7 2.7 4.7 3.0 3.0 255 256 - 4.3 M 75.0 3.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.5 75.0 75.0 75.0 75.0 75.0 75.0 8.0 75.0 75.0 3.0 0.0 3.0 75.0 75.0 257 258 * 1.8 P 4.5 3.0 37.5 41.5 2.5 6.5 4.5 37.5 6.0 3.0 5.0 2.5 5.0 42.8 40.5 2.5 6.8 41.5 42.8 4.0 0.5 3.5 5.5 4.5 259 260 C 4.5 M 6.0 6.0 0.0 7.0 38.0 8.2 5.5 0.0 6.0 6.5 6.0 39.5 3.5 7.8 2.0 40.0 40.5 4.5 6.8 6.5 4.5 7.0 6.0 7.0 261 262 * 3.5 M 37.5 75.0 1.0 75.0 37.5 2.5 37.5 37.5 37.5 75.0 37.5 39.0 37.5 3.0 7.0 39.5 75.0 6.0 5.0 75.0 75.0 75.0 37.5 37.5 263 264 C 4.7 H 0.0 4.0 0.5 42.0 1.0 3.5 2.0 1.0 5.5 2.5 0.5 0.5 2.0 0.0 1.5 4.5 3.5 1.0 0.0 5.0 0.0 4.0 2.0 1.5 266 270 E 5.0 H 0.0 0.0 0.4 0.2 0.0 0.0 0.0 0.6 0.0 0.0 0.0 0.0 0.0 1.8 0.0 0.0 0.0 0.4 0.4 0.0 0.4 0.4 0.0 0.0 271 273 * 2.2 P 3.3 4.7 51.3 51.0 29.3 28.7 29.0 52.7 29.0 3.7 4.3 29.5 29.0 2.7 53.0 29.0 3.7 5.0 4.7 3.3 4.0 3.7 28.7 27.7 274 277 - 4.7 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 8.5 75.0 75.0 75.0 6.6 7.5 75.0 75.0 75.0 75.0 75.0 278 281 * 2.2 P 3.0 40.0 18.8 22.5 22.2 23.0 23.0 19.5 22.0 40.2 2.5 40.0 21.8 6.2 21.2 4.8 39.8 4.8 5.0 40.2 40.8 40.5 6.0 21.8 282 286 E 4.9 H 1.8 1.8 0.4 2.4 2.2 1.6 1.2 0.4 1.4 1.2 0.0 1.8 0.8 3.8 0.8 1.8 1.6 2.6 1.4 0.0 1.4 1.6 1.8 1.0 287 288 C 4.7 H 1.0 3.0 4.5 8.8 1.5 1.5 0.0 4.5 1.5 3.0 1.0 1.0 0.0 7.8 37.5 0.5 3.0 4.0 2.0 2.5 0.5 3.0 0.5 1.0 289 295 * 3.3 M 33.6 44.7 34.6 75.0 6.3 35.0 34.7 34.6 34.9 44.9 34.7 55.1 35.1 65.3 34.0 5.7 45.9 17.3 35.0 44.4 43.6 44.9 34.7 34.7 296 312 - 4.3 M 75.0 75.0 1.8 75.0 66.4 75.0 75.0 12.0 75.0 75.0 75.0 75.0 75.0 7.4 18.4 75.0 75.0 7.1 2.8 67.1 75.0 75.0 75.0 75.0 314 337 - 4.3 M 75.0 75.0 6.9 75.0 4.1 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.4 75.0 33.9 75.0 2.5 2.5 75.0 75.0 75.0 75.0 75.0 338 340 * 2.0 P 6.5 8.2 1.3 75.0 4.3 6.8 6.3 75.0 8.0 7.0 6.7 53.0 8.2 4.0 75.0 3.0 29.0 26.0 3.3 7.3 7.8 9.2 7.0 7.3 341 343 C 4.5 M 3.3 3.3 4.3 75.0 2.3 2.7 2.3 75.0 2.7 2.7 2.7 3.0 3.0 27.0 75.0 2.0 3.0 27.3 27.3 2.3 3.3 3.7 3.0 3.3 344 348 * 2.3 P 0.4 0.6 8.8 75.0 1.4 0.4 0.8 75.0 0.4 0.8 0.4 15.2 0.8 75.0 75.0 1.2 0.8 75.0 75.0 0.8 1.4 1.4 0.6 0.6 349 350 H 4.5 M 3.5 2.5 5.0 75.0 3.0 3.0 4.0 75.0 4.0 3.0 3.0 2.0 4.0 75.0 75.0 4.0 4.5 75.0 75.0 2.0 4.0 4.5 3.5 2.5 351 355 * 2.5 P 19.9 3.6 4.2 75.0 5.2 4.2 3.4 75.0 4.0 3.6 3.8 4.2 4.4 75.0 75.0 61.2 5.0 75.0 75.0 4.4 4.2 4.4 3.8 3.2 356 358 - 4.9 H 75.0 75.0 4.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 359 361 * 3.2 M 28.3 6.3 4.0 75.0 75.0 5.5 29.5 75.0 29.5 5.7 4.8 75.0 29.2 75.0 75.0 75.0 7.3 75.0 75.0 6.5 6.8 5.5 29.8 5.3 367 371 * 3.4 M 5.0 61.8 4.0 4.6 5.4 75.0 31.8 75.0 32.0 61.8 6.2 5.2 32.0 61.6 75.0 33.0 61.8 75.0 61.6 60.8 60.4 61.0 4.6 3.2 372 376 - 4.4 M 75.0 75.0 4.6 5.1 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 17.4 17.6 75.0 75.0 17.4 17.8 75.0 75.0 75.0 75.0 75.0 377 378 * 1.0 P 2.0 2.0 2.0 4.5 2.5 3.5 3.0 3.0 3.5 2.5 1.0 5.8 4.5 2.0 2.5 3.5 2.5 3.0 3.5 2.0 3.0 2.5 4.0 2.0 379 382 E 5.0 H 0.0 0.0 0.0 0.2 0.2 0.8 0.8 0.0 0.0 0.0 0.0 0.2 0.0 0.8 0.0 0.5 0.0 1.0 0.5 0.0 1.2 0.0 0.8 0.0 383 384 * 1.0 P 0.0 0.0 0.0 2.5 0.0 0.0 0.5 0.5 1.0 0.0 0.0 0.0 0.0 2.5 0.0 1.5 0.0 0.0 0.0 5.0 0.0 0.0 1.0 0.0 385 387 C 4.8 H 0.3 4.3 1.7 50.3 0.3 0.7 0.3 2.3 1.0 6.0 0.3 0.3 0.3 1.7 2.3 0.7 6.5 2.0 1.7 75.0 27.3 28.3 1.3 0.0 388 389 * 4.0 M 75.0 8.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 8.0 75.0 3.0 75.0 4.0 75.0 75.0 5.5 39.5 2.5 75.0 4.5 3.0 75.0 75.0 390 393 - 4.3 M 75.0 1.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.0 75.0 41.5 75.0 75.0 75.0 75.0 1.5 75.0 75.0 39.0 4.2 1.5 75.0 75.0 395 403 H 4.9 H 3.0 3.6 2.2 1.1 3.7 3.6 2.2 2.2 2.3 3.1 2.8 1.7 2.6 3.8 0.6 3.1 3.7 3.4 3.4 5.0 4.9 3.6 3.1 2.0 404 412 * 3.0 P 34.4 27.9 34.1 42.9 34.7 35.1 34.6 34.7 34.4 35.4 34.1 42.3 34.2 27.6 33.4 34.9 36.2 34.9 27.4 20.6 35.9 26.9 34.7 34.4 413 416 E 4.9 H 0.0 0.2 0.0 1.8 0.2 3.2 0.0 0.0 1.0 0.8 0.0 0.0 0.0 2.2 1.2 0.8 1.5 3.2 2.2 3.8 3.5 1.0 0.8 0.0 419 448 * 3.4 M 41.7 36.9 29.4 39.2 42.0 32.7 34.6 29.6 34.9 39.5 18.7 39.4 34.6 39.0 34.1 33.1 39.8 39.0 39.2 75.0 72.8 46.9 54.2 34.6 449 454 - 4.4 M 75.0 75.0 39.6 40.2 75.0 6.2 40.9 38.3 40.3 75.0 75.0 75.0 41.8 75.0 38.2 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 16.8 455 474 * 3.0 P 17.2 75.0 53.5 5.0 11.6 13.4 14.3 53.6 46.5 75.0 10.6 10.5 10.6 15.0 28.7 33.0 75.0 18.8 8.7 75.0 75.0 75.0 7.0 11.0 475 476 - 4.8 H 75.0 75.0 75.0 5.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 477 484 * 3.3 M 3.9 75.0 75.0 3.6 3.1 24.4 5.1 75.0 75.0 75.0 14.0 22.2 4.4 12.5 75.0 40.5 75.0 21.6 12.1 75.0 75.0 75.0 5.1 13.5 486 487 * 4.1 M 1.5 5.2 75.0 75.0 75.0 75.0 7.0 75.0 75.0 5.8 9.8 75.0 6.0 75.0 75.0 75.0 43.2 75.0 75.0 75.0 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