Reading input alignment file to find conserved blocks of secondary structure The input structure based alignment from Comparer _____________________________________________ >P1;d1j5xa- --------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHCHHHHHHHC--HH-----H-CC-------------CCC---CEEEEECCHHHHHHHHHHHHHHHHHC-------CCEEEEEHHHHHCCCCC-------CCCEEEEECCCCCCHHHHHHHHHHHHC----------CC-EEEEEECCCCCHHHHHCC-------EEEECCC-CCCCCC-CCCC-CCCCC-CCHHHHHHC-------------CC--CHHHHHHHHHHHHHHHHHHHHHHCCCHH---HCCEEEEECC-HH--HHHHHHHHHHHHC-CCC----------------CEEEC-HHHHHC---CHHHHCCCCEEEECCCC-----------------C-CHHHHHHHHHHHHCCCEECCCCC-----------------------------CCC--CCCCCC---HHHHHHCCHHHHHHHHHHHHHHCCCCCCCC---------------CCCCCC-CC-------------------- >P1;d1m3sa1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHHHHHC-------------------CCC----------------------CCHHHHHHHHHHCC-------------CEEEECCH---------------------------------HHHHHHHHHHHHHHHCC------CCEEECCC------C----------------------CCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHC---------------CCEEEEEECCCCCHHHH---------HC---CEEEECCCCC----CCCCCCCCC-------------------------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--------------------C----------------- >P1;d1moqa- ------------------------------------------------------------------------------------------------------------------CCCC-CCCCHHHHHHHCHHHHHHHHHCCCEE-C-----C-EECCHHHCCCHHHHHH--HCCEEEEEECHHHHHHHHHHHHHHHHHCC-------CCEEEEEHHHHHCC--CCCCC---CCEEEEEEECCCCCHHHHHHHHHHCCC----------CCCEEEEEECCCCCHHHHHCC-------EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CC----HHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHH-HCCCCEEEEEECHHH--HHHHHHHHHHHHHHHCC---------------EEEEEE-HHHHHH---CHHHHCCCCCCEEEECCC---------------HHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCC---------------------CCCCEEEEEECCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---------------CCCCCCCCC-------------------- >P1;d1nria- ------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCHHHCCCHHHCCHHHC------CHHHHHHCCCCCCHHHHHHHH--------------------HH----------------------HHHHHHHHHHHHHHHC---------CCCEEEEECH---------------------------------HHHHHHHHHHHHHHHHHCCC-CCCEEEECCC------HHHHCCC--CCCHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH---------------CCEEEEEECCCCCC-CC---------CC---CEEEECCCCCCCC------CCCC-------------------------------------------------------------------CCHHHHHH-CCCC-CCCCCC-CCCCCCCCCCCCCCCC--------------------HHHHHHHHHHCCCCCCCC >P1;d1tzba- -----------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEC-------------CCCCEEEEECCHHHHHHHHHHHHHHHHC----CCC--CEEEEECCCCCC--CC---------CCEEEEECCCCCCHHHHHHHHHHHHC-------------CCCEEEEECCCCHHHC-------CCCEEECC----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCCCC---------------HHHHHHHHHHHCC------CCEEEEEHHH--HHHHHHHHHHHHHCCCC---------------CCEEEEE-CHHHH---CHHHHCCC--CEEEEECCCCC--------------------------------------------HHHH------HHHHHHHHHH------CCEEEECC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC---------------------------------- >P1;d1vima1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHHHHH-------------------HCC----------------------HHHHHHHCCCCCCC-------------CEEEECCH---------------------------------HHHHHHHHHHHHHHHCC------CCEEECCC------C----------------------CCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHH---------------CCEEEEEECCCCCHHHH---------HC---CEEEECCCCCCCCHHHHHHHCHH-------------------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHCCCC--------------------C----------------- >P1;d1wiwa- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCHHHHHHCCCCHHHHHHH-----------------CCCCCCCCCCCCCCCEEEEEE-----HHHHHHHHHHCCCCCCCC-------CEEEEEECCCCCC--CCCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCHHHHHH----HHH------HHHHHHCCCCCCCCHHHCHHHHHHHHHC---CCEEEEECCC--CCHHHHHHHHHHHH---------------CCCCCCCCCCCCHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHHHHHHHCCCCC--------------------EEE-------------EECCCCC------------------------CHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCC------------------------------------------ >P1;d2cxna- CCHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCEEEEECCCCEEEEECCCCC--CCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEECHH-HHHHHHHHHHHHHHHHHC-----CCCCCCCC-----------------CCCCEEEEECCHHHCHHHHHHHHHCHHHHC-----CCCEEEEECCC-CHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECC---HHHHHHHCCCHHHEEECC------CCCCHHHC---CCCHHHHHHHHHHCHHHHHH----HHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHCCCCC-EEEEEECCHHH--CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCC-CCCHHHHHHHHHHCCCCCCEEEEEEEECCCCC------HHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC >P1;d2e5fa- --------------------------------------------------------------------------------------------------------------------------CCHHHHHCCHHHHHHHHHHHH--HH-----H-CC-------------CCCCCCEEEEEECCHHHHHHHHHHHHHHHC-C-------CEEEEEEHHHHHHHHHHCCCC---CCCEEEEECCCCCCHHHHHHHHCC-------------CC-CEEEEECCC-CHHHHHCC-------EEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHCC-------------CC--CCCHHHHHHHHHHHHC-CHHHHHHHHHHC--CCCEEEEEECCCH--HHHHHHHHHHHHHHHCC---------------EEEEEE-HHHHHC---CHHHHCCCCEEEEEEEC-----------------CCCHHHHHHHHHHHHCCCEEEEEECCCC------------------------CCCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC---------------CCCCCC-CC-------------------- >P1;d2i2wa- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------CHHHHHHHHHHHHHHHHHHHHC-----------------HHHH----------------------HHHHHHHHHHHHHHHC---------CCCEEEEECC---------------------------------HHHHHHHHHHHHHHHHHCCCCCCCCEEECCC------CCCHHHH--C-CCCCCCCHHHHHHHH-HCCCCCEEEEECCCCCCHHHHHHHHHHHHH---------------CCEEEEEEECCCHHHCC---------CC---CEEEEECC--CCC-----------------------------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC-------------------------------------------------- >P1;d2yvaa- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHHHHHHHHHH-------------------HCH----------------------HHHHHHHHHHHHHHHC---------CCCEEEEECC---------------------------------HHHHHHHHHHHHHHCCCCCCCCCCCEEECCC------CHHHHHH--HCCCCCHHHHHHHHHHH-HCCCCCEEEEECCCCCCHHHHHHHHHHHHC---------------CCEEEEEECCCCHHHHC---------CCCCCCEEEECCC--CC------------------------------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHCCC------------------------------------------------- >P1;d3ff1a1 ------------------------------------------------CCCEECCCCHHHCCCHHHHHCCHHHHH-----HHHHHHHHCCCCCHHHCCCCCHHHHCC------------------HHHHHHHHHHHHHHHH-------------------------------HCCEEEEECCHHHCHHHHHHHCCCCC---CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC-HHHHHHHEEEEECCCCCHHHHHHHH---HCCEEEECC----CCCCHHHC---CCCHHHHHHHHHCCC---CC----CCCHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHH-CCC--CEEEEECCC-C--CHHHHHHHHHHHHHHCCC----------CCCCEEEEEEC-CHHHHCCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC----------CCCCCHHHHCCCC------HHHHHHHHHH------HHHHHHHHCC------CCCCEEECCCCHHHHHHHHHHHHHHHC-CHHHHCCCCCCCHHHHHHHHCCCCCCCC------------CCHHHHHHHHHCC---- >P1;d3g68a1 ---------------------------------------------------------------------------------------------------------------------------CCCCC-CCCCCCCH-HHH---------------HHHHHCCCHHHCC-----CCEEEECCHHHHHHHHHHHHHHHHHCC-------CCEEC-CCCCC---HHHHC-----CCCEEEECCCCCCCHHHHHC--CCCCC----------CC-EEEE-CCC-CCHHHHHCC-------EECCCCCCCCCCCCCCHHHHHHHHH-CCHHHHHHHHCCCCC----HHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHCHHH-HHCCCEEEEEECHHH--HHHHHHHHHHHHH-CCC---------------CEEEEE-HHHHHC---CHHHHCCCCEEEEEEECC-----------------CCCCCC-C-HHHHCCC-CEEEEEC---CCC---------------------CCC--CCEECCCCCCCCHHHHCCCHHHHHHHHHCHHHHCCCCCCCC---------------CCCCCC----------------------- >P1;d3knza1 ---------------------------------------------------------------------------------------------------------------------------------CCHHHHHH-CCC---------------CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC-CCCCC-------CCEEEECCCCC---HHHHHHC---CCEEEEECCCCCCCHHHHHC-CHHHHC----------CC-EEEE-CCCCCCHHHHHCC-------EECCCCCC-------CCHHHHHHHH-CCHHHHHHHHCCCCC----HHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHCCCC-C--CCEEEEEECHHH--HHHHHHHHHCCCC-CCC---------------CEEEEE-HHHHHH---CHHHHCCCCEEEE-CCCC-----------------CCHHHHHH-CCHHHHCCCCCCEEC---CCC---------------------CCC--CCEECCCCCCCCCCHHHHHHHHCC-CCCCC------------------------------------------------------- >P1;d4s1wa- ------------------------------------------------------------------------------------------------------------------------CCCCCCHHHHCCCCC-CHHHHHCCCCC-----C-CCCCC---HHHHHHHH--HCCEEEEEECCHHHHHHHHHHHHHHHCCC-------CCEEEEEHHHHCC---CCCCC---CCEEEEEEECCCCCHHHHHHHHHHHHH----------CC-EEEEEECCCCCHHHHHCC-------EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC---------CCCCCHHHHHHHHHHHHHHHHH-CCCC-CHHHHHHHCCCCEEEEEECCHH--HHHHHHHHHHHHHHHCC---------------EEEEEE-HHHCCC---CHHHHCCCCCEEEEECCC---------------HHHHHHHHHHHHHHHCCCCEEEEEEC-CCCCC-------------------------CCCEECCCC-CCCCHHHHHHHHHHHHHHHHHHHHC--------------------------------------------------- >P1;d5lu5a- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CH------HHHHHHHHHHHHHHHHHHHHCC-----------------HHHH----------------------HHHHHHHHHHHHHHHC---------CCCEEEECCC---------------------------------HHHHHHHHHHHHHHCCCCCCCCCCCEEECCC------CHHHHHH--HHHHHCHHHCCHHHHHH-HCCCCCEEEEECCCCCCHHHHHHHHHHHHC---------------CCEEEEEECCCCCCHHH---------HC---CEEEECCC--CC------------------------------------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHC-------------------------------------------------- >P1;d7kqaa1 ------------------------------------------------------------------------------------------------------------------CCCCCHHHCHHHHHHHCHHHHHHHHHHHH---------------HHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHC-------CCEEECCCCCCCCC-CCCCCC---CCCEEEEEECCCCCHHHHHHHHHHHHC----------CC-EEEEEECCCCCHHHHHCC-------EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-------------CCHHHHHHHHHHHHHHHHHHC-C--CCHHHHHH-CCCCCEEEEEECHHH--HHHHHHHHHHHHHHHCC---------------EEEEEE-HHHC-C---CHHHHCCCCCEEEEECCC---------------CCCCCCHHHHHHHHHHCCCEEEEECC-------------------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---------------C----CCCC-------------------- PSA >P1;d1j5xa- --------------------------------------------------------------------------------------------------------------------------350350020026506810472--04-----6-15-------------827---2000002a322000100031064117-------28040040350065709-------901100000110512200400510373----------b0-600000057806007403-------4422051-905030-0110-00000-001002419-------------58--0940660062047006203510671707---6162000003-00--2000300020052-040----------------03035-256037---92397089200000037-----------------b-66614602620484504000006-----------------------------b04--040024---220000000000000110060293512804---------------a37226-67-------------------- >P1;d1m3sa1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------59a756643781099046-------------------518----------------------94155006302809-------------1000005c---------------------------------51162044006404104------150323a4------a----------------------922-908770000000270549802820560375---------------70200000263804007---------20---4030500039----932a2518b-------------------------------------------------------------------61001200351056007301744a3789808356989--------------------c----------------- >P1;d1moqa- ------------------------------------------------------------------------------------------------------------------b939-9271202200230090076018b006-a-----5-4030850599057204--6050000002a012000100330048307-------05040230370174--a0a15---830000000110411301200540593----------a01200000047800016306-------1102050b90401010000000000000000000413a-38----76204700700540073067007-41740470076-019285000004520--20002000300410020---------------704034-0b5067---800860467000000107---------------750076027104504a5803000003663909---------------------5580130040360-48100000000000000000034392601807---------------a45227499-------------------- >P1;d1nria- ------------------------------------------------------------------------------------------------------------------------------------------------------------7aa2203570770662772------899347606516650661278--------------------06----------------------6417500630162167---------a020000006---------------------------------31031035007501351138-8602010039------9803868--3b6146659304830582905670000001031502001100520583---------------70200000004916-09---------10---3020304042028------3123-------------------------------------------------------------------74000600-5005-005505-6283167a13415285--------------------97156545717418b5b7 >P1;d1tzba- -----------------------------------------------------------------------------------------------------------------------------470280055048202470906751619954160-------------6437501000290000001003000402----a0a--060311353708--15---------90000000150513201500410274-------------6000000014470182-------c0010505----8011400000000000000014109190420----8205727---------------9920740162057------4000000300--30003002300320030---------------9050300-48016---6119a097--40000205204--------------------------------------------7724------6408502761------73250505-02021001000000000050066393813717a461666767---------------------------------- >P1;d1vima1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------a837711650473187-------------------726----------------------8a118600204805-------------0000104b---------------------------------61280045007404002------150222b5------9----------------------914-913670000000260538702740670263---------------60500000157904007---------20---4020104241927678049305a-------------------------------------------------------------------91001400240056007402844918-941784498a--------------------a----------------- >P1;d1wiwa- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5504798127207760164056-----------------01642250b5a0546200301-----100610050081683567-------10001000041ab--4a0b299279043040033980515064100010101100010073582062----026------0046046402391429702007103202---8330000001--23300710470060---------------002290410487038405661485874075000000058a51850382069304--------------------202-------------5060317------------------------5500200000100000000003041022858a9------------------------------------------ >P1;d2cxna- 703016164057026216641a8050272288486056600171609725020100200--0276016001600431804820560170532034173000000000366851618982106-404500830570075024-----47150147-----------------64050000003611020020003003121a-----b0060300165-78730770085051310000000260534302500640272038308589005500000024---584066170559100302------60055000---00000000000002083035----003001200410372605700000000020000001608-31000001730--340010042003300616506773605170005020500-27007620850134972000000006621666------7a4361762363076206501503-----6574037506859469960674058413804100010204303010000000000000000020020000036c568a765667355348baa718728a822870675084496a9 >P1;d2e5fa- --------------------------------------------------------------------------------------------------------------------------340260045016005302710--56-----2-27-------------70a026300000291012003000300531-a-------05020030440074597380a---814000000120112102400550-------------a4-610000057-03007304-------3002040-60700000000000000000001411a-------------37--6081870060053017-227403500671--8050000007800--20001000100520020---------------602013-025057---b4383056600000012-----------------6068604600520393604000000176------------------------8050224050350-570000000000000000100543a3601706---------------848416-59-------------------- >P1;d2i2wa- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------8------8596677577437704750776-----------------8815----------------------5106600420061038---------911000003c---------------------------------9037004400730173159a39a60030062------7774369--9-a49082400162057-3088a0000000140522004300710483---------------7060000003702703b---------50---31103031--68a-----------------------------------------------------------------------------6710330024005500730572088-------------------------------------------------- >P1;d2yvaa- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------98a967757533771475078-------------------605----------------------9116500820160056---------a21000004c---------------------------------5027005301700585151906614050004------6994286--15979653210052047-507670000001160656201100800663---------------8020000001802701a---------4079a10104031--66------------------------------------------------------------------------------45102500540045005400761355------------------------------------------------- >P1;d3ff1a1 ------------------------------------------------320604163026205772077349406-----612620363646129413004104737------------------7911740360065037-------------------------------40600000027121100200130366---9487a6403010000365a842770365078250000001451744104600940282029319-6a30560000000478660273077---270320402----55065000---010000100000010---70----7280024038207336066010010000010028-381--510001047-2--522030022003300617----------b4008140030-3821875085137373310000001972593742876a----------7398852811942------6264247414------9106500835------000004034422401200000000000-0001180200456c35973352038558------------927b338714788---- >P1;d3g68a1 ---------------------------------------------------------------------------------------------------------------------------70371-43106347-017---------------5078104701519-----040000047211000000241047108-------37043-40906---77308-----2710002001a065850280--30583----------90-3000-006-c04016306-------2502050590507020000000000-000000002348218----8940651184035016306901-506800740494-027062010002630--4000200030054-032---------------705012-147047---635860886000000107-----------------518509-3-8814940-2000001---808---------------------768--410409009333000100000000000200542b2702659---------------476977----------------------- >P1;d3knza1 ---------------------------------------------------------------------------------------------------------------------------------a8106302-518---------------5917203600510465b0620000065101000101461-35114-------25040350806---7960582---84000020138305960150-430494----------90-0000-0265905017002-------1402042b-------9150000011-110000002329308----b853860373-4600650570393167005703b5-0--271020102790--3000200033554-174---------------604022-057039---829b008570000-0018-----------------65a60681-151598082001001---809---------------------85a--300217013181111000010020-18203------------------------------------------------------- >P1;d4s1wa- ------------------------------------------------------------------------------------------------------------------------b33653400430160-550175024b8-----5-71607---67004203--50530000048202100100320035008-------0403024058019---a4b13---a60000000170547404500550466----------92-500000156802016404-------1103030683528110000000010000000000526---------42a1501710640080045019-3275-4610550049072000002600--31002000200531080---------------804023-036076---a118607a7000000000---------------89109501710860476404301006-b145b-------------------------902120270-2700000000010000001003127--------------------------------------------------- >P1;d5lu5a- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------88------7667667387439503730885-----------------9805----------------------7104600520280175---------a12000003c---------------------------------6037106401910685264907304050005------5894286--02965876500050055-508960000000150736001200530573---------------80300000055085058---------10---42102020--47------------------------------------------------------------------------------5510240044003500330074223-------------------------------------------------- >P1;d7kqaa1 ------------------------------------------------------------------------------------------------------------------153a5452050160034006004301850---------------594039005403886053000005a112100200330026119-------18064101765899-1777b0---890000000430737202520520481----------30-300000046904007304-------2201020970704030000000000000000003-------------62a803700970070047007-1--80770055-01a185000003411--10003000300430060---------------604022-0851-9---501870898110000013---------------71ac8006521850575605010013-------------------------------b170520a1124001000000000310020005152100544---------------a----8074-------------------- Translating the sequences --------------------------------------------------------------------------------------------------------------------------*********************--**-----*-**-------------***---******C*HHHHHHHHHHHHHHHH**-------*****************-------**************HHHHHHHHHHHH*----------**-**EEEECCC*********-------*******-******-****-*****-**HHHHH**-------------**--***H*HH*************HHH***H*---*CC*EEEE*C-**--HHHHHHHHHHHH*-***----------------*EE**-**HHH*---******CC****E***C-----------------*-***********************-----------------------------***--******---HHHHHH**HHHHHHHHHHHHH*CCC*CC**---------------******-**-------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**HHHHHHHHHHHHH***-------------------***----------------------**HHHHHHHHHH**-------------*EEEECC*---------------------------------HHHHHHHHHHHHHHH**------********------*----------------------***-**CCC*EEEEEC*****HHHHHHHHHHHH*---------------****EEEE*****HHH*---------*C---*EEEECC***----*********-------------------------------------------------------------------*HHHHHHHHHHHHHHHHHHHHH*CCC*CC********--------------------*----------------- ------------------------------------------------------------------------------------------------------------------****-**************************-*-----*-****************--*********C*HHHHHHHHHHHHHHHH**-------**************--*****---**************HHHHHHHHHH***----------*****EEEECCC*********-------*****************HHHHHHHHHHHHHHHH*****-**----**********H*HH*********-***HHHHHHH*-**CCC*EEEEEC***--HHHHHHHHHHHHH****---------------EEEE**-**HHH*---******CC****EEE*CC---------------********************************---------------------*************-**HHHHHHHHHHHHHHHHHHHHH*CCC*CC**---------------*********-------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------*******************------C*HHHHH******HHHHH***--------------------**----------------------HHHHHHHHHHHH****---------***EEEE*C*---------------------------------HHHHHHHHHHHHHHHH****-**********------*H*H***--*********HHHHHHH****CCC*EEEEEC*****HHHHHHHHHHHHH---------------****EEEE******-**---------CC---*EEEECC******------****-------------------------------------------------------------------**HHHHHH-****-******-**CCC*CC********--------------------****************** -----------------------------------------------------------------------------------------------------------------------------*********************************-------------**********C*HHHHHHHHHHHHHHH*----***--************--**---------*************HHHHHHHHHHHH*-------------***EEE**C*******-------********----*******HHHHHHHHHHHHHHHH********----*******---------------*****HHHHHH**------**EEEE****--HHHHHHHHHHHHH****---------------**EE***-*HHH*---******CC--**EEEECC***--------------------------------------------****------**********------********-**HHHHHHHHHHHHHHHHHHHHH*CCC*CC************---------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*HHHHHHHHHHHH***-------------------***----------------------HHHHHHH*******-------------*EEEECC*---------------------------------HHHHHHHHHHHHHHH**------********------*----------------------***-**CCC*EEEEEC*****HHHHHHHHHHHHH---------------****EEEE*****HHH*---------*C---*EEEECC****************-------------------------------------------------------------------*HHHHHHHHHHHHHHHHHHHHH*CCC-CC********--------------------*----------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C****HHHHHH****HHH****-----------------*********************-----HHHHHHHHHH********-------***EEEECCC***--*******************************HHHHHHHHHHHH*********----***------*H*HH*************HHHHHHH***---C*EEEEEC**--**HHHHHHHHHHHH---------------*************HHH****************EEEECC****************--------------------***-------------*******------------------------*HHHH*******HHHHHHHHHH*CCC*CC****------------------------------------------ ***********************************************************--*************************************************************-******************-----********-----------------**********C*HH*HHHHHHHHH*HHH**-----***********-****************************HHHHHHHHHHHH****************EEEECC---******************------********---***HHHHHHHHH********----**********H*HH*************HHHHHHH****C-**EEEE*C***--**HHHHHHHHHHH*******************EEE****-***H**********CC****EEEE********------************************-----*******************************************HHHHHHHHHHHHHHHHHHHHH*CCC*CC********************************************** --------------------------------------------------------------------------------------------------------------------------*********************--**-----*-**-------------************C*HHHHHHHHHHHHHHH*-*-------*********************---**************HHHHHHHH**-------------**-**EEEECCC-********-------*******-*********HHHHHHHHHHHHHHHH**-------------**--***H*HH*********-***HHHHHHH**--CCC*EEEEEC***--HHHHHHHHHHHHH****---------------EEEE**-**HHH*---******CC****EEEEC-----------------****************************------------------------*************-********HHHHHHHHHHHHHHH*CCC*CC**---------------******-**-------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*------C*HHHHHHHHHHHHHHHH****-----------------****----------------------HHHHHHHHHHHH****---------***EEEE*CC---------------------------------HHHHHHHHHHHHHHHH***************------***HH**--*-*******HHHHHHH*-**CCC*EEEEEC*****HHHHHHHHHHHHH---------------****EEEE*****HH**---------CC---*EEEE*C*--***-----------------------------------------------------------------------------*HHHHHHHHHHHHHHHHHHHHH**C-------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C*HHHHHHHHHHHHHHHH***-------------------***----------------------HHHHHHHHHHHH****---------***EEEE*CC---------------------------------HHHHHHHHHHHHHH*****************------*H*HH**--*********HHHHHHH*-**CCC*EEEEEC*****HHHHHHHHHHHH*---------------****EEEE*****HHH*---------CC****EEEECC*--**------------------------------------------------------------------------------*HHHHHHHHHHHHHHHHHHHHH*CCC------------------------------------------------- ------------------------------------------------***************************-----***************************------------------****************-------------------------------*********C*HH*HHHHHHH*****---*********************************************HHHHHHHHHHHH*******-********EEEECCC**********---*********----********---***HHHHHHHHH***---**----**********H****************HHHHHHH-***--C*EEEE*C*-*--*HHHHHHHHHHHH*****----------****EEEE***-*HHH**********CC*****EEE*C************----------*************------**********------**********------***********HHHHHHHHHHHHHHH*-*HHH*CCC*CC*****************------------*************---- ---------------------------------------------------------------------------------------------------------------------------*****-********-***---------------*************-----*******C*HHHHHHHHHHHHHHHH**-------*****-*****---*****-----**************HHHHH*--*****----------**-**EE-*CC-*********-------*****************HHHHHHHH-**HHHHH********----**********H*HH********-****HHHH*HH*-**CCC*EEEEEC***--HHHHHHHHHHHHH-***---------------*EEE**-**HHH*---******CC****EEEECC-----------------******-*-*******-*******---***---------------------***--************HHHH***HHHHHHHHH*HHH*CCC*CC**---------------******----------------------- ---------------------------------------------------------------------------------------------------------------------------------********-***---------------*************************C*HHHHHHHHH***-*****-------***********---*******---**************HHHHH*-*HHHH*----------**-**EE-*CCC*********-------********-------**HHHHHHHH-**HHHHH********----**********-*HH*************HHHH****-*--CC*EEEEEC***--HHHHHHHHH****-***---------------*EEE**-**HHH*---******CC****E-**CC-----------------********-***************---***---------------------***--**************HHHHHHHH**-*****------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------***************-***********-----*-*****---********--*********C*HHHHHHHHHHHHHHH***-------*************---*****---**************HHHHHHHHHHHH*----------**-**EEEECCC*********-------*****************HHHHHHHHHHHHHHHH****---------*********H*HH*********-****-*HHHH****CCC*EEEEEC***--HHHHHHHHHHHHH****---------------EEEE**-**H***---******CC****EEE*CC---------------**************************-*****-------------------------*********-****HHHHHHHHHHHHHHHHHHH*C--------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------**------**HHHHHHHHHHHHHHHH****-----------------****----------------------HHHHHHHHHHHH****---------***EEEECCC---------------------------------HHHHHHHHHHHHHH*****************------*H*HH**--***********HHHHH*-**CCC*EEEEEC*****HHHHHHHHHHHH*---------------****EEEE******HH*---------*C---*EEEECC*--**------------------------------------------------------------------------------*HHHHHHHHHHHHHHHHHHHHH**C-------------------------------------------------- ------------------------------------------------------------------------------------------------------------------*****************************---------------***********************C*HHHHHHHHHHHHHHHH**-------**************-******---**************HHHHHHHHHHHH*----------**-**EEEECCC*********-------*****************HHHHHHHHHHHHHHHH*-------------********H*HH*********-*--**HHHHH*-**CCC*EEEEEC***--HHHHHHHHHHHHH****---------------EEEE**-**H*-*---******CC****EEE*CC---------------**************************-------------------------------************HHHHHHHHHHHHHHHHHHHHH*CCC*CC**---------------*----****-------------------- 53697.tem _________________________________ ---------------------------------------------------------------------------------------------------------------------------********************---*-----*---***---********-**********C*HHHHHHHHHHHHHHHH***------*********************---**************HHHHHHHHHHHH****-------*****EEEECCC*********-------*****************HHHHHHHHHHHHHHHH**********************H*HH*************HHHHHHH****CCC*EEEEEC*****HHHHHHHHHHHHH****-----------****EEEE*****HHH*---******CC****EEEECC******---------**************************---***-----------------------*-*********-**HHHHHHHHHHHHHHHHHHHHH*CCC*CC********---------*----*----------------------- Structural block scores 0 122 - 4.8 H 74.4 75.0 70.5 75.0 75.0 75.0 75.0 4.9 74.4 75.0 75.0 43.6 75.0 75.0 73.3 75.0 69.8 123 142 * 3.3 M 2.8 75.0 2.7 75.0 10.4 75.0 75.0 10.2 2.3 75.0 75.0 17.9 17.7 36.0 6.5 75.0 2.3 143 145 - 4.4 M 50.0 75.0 27.0 75.0 5.0 75.0 75.0 75.0 51.7 75.0 75.0 75.0 75.0 75.0 5.8 75.0 75.0 147 151 - 4.7 H 75.0 75.0 75.0 75.0 4.4 75.0 75.0 2.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 153 155 - 4.4 M 27.0 75.0 26.3 75.0 3.3 75.0 75.0 52.3 28.0 75.0 75.0 75.0 75.0 75.0 27.7 75.0 75.0 156 158 * 3.9 M 75.0 75.0 3.7 9.3 27.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.0 5.0 4.3 75.0 51.7 159 161 - 4.2 M 75.0 75.0 3.3 1.3 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.0 3.0 75.0 75.0 4.3 162 169 * 3.9 M 66.6 75.0 4.5 4.4 75.0 75.0 75.0 75.0 66.5 75.0 75.0 75.0 12.8 2.4 2.8 75.0 3.0 171 180 * 3.0 P 23.4 75.0 8.6 46.8 2.6 75.0 75.0 1.5 2.1 68.3 75.0 8.5 22.9 2.5 8.8 61.6 2.2 183 198 H 4.6 H 1.4 10.3 1.6 4.4 0.6 18.0 4.2 0.9 1.2 5.7 5.8 6.3 1.4 6.2 1.2 5.2 1.4 199 201 * 2.3 P 27.7 3.3 27.3 5.7 75.0 5.3 3.0 28.8 53.5 4.7 5.0 53.0 27.7 26.7 27.7 5.3 28.3 202 207 - 4.6 H 75.0 75.0 75.0 75.0 41.0 75.0 63.5 51.9 75.0 63.5 75.0 6.6 75.0 75.0 75.0 63.3 75.0 208 228 * 3.0 P 16.8 65.0 10.1 68.1 27.0 65.0 44.4 7.0 3.4 61.8 64.8 3.4 24.3 14.0 13.9 61.8 8.3 229 231 - 4.5 M 75.0 75.0 75.0 75.0 75.0 75.0 5.2 2.0 75.0 75.0 75.0 5.0 75.0 75.0 75.0 75.0 75.0 232 245 * 2.9 P 1.4 75.0 1.3 75.0 6.9 75.0 28.3 1.4 1.3 75.0 75.0 2.1 2.5 2.4 2.4 75.0 2.4 246 257 H 4.7 H 2.0 3.6 2.5 3.2 2.1 4.0 1.8 2.8 14.1 2.5 3.2 3.2 15.8 9.7 3.3 2.9 3.1 258 261 * 3.0 P 57.0 39.8 57.0 4.0 57.2 38.8 5.5 3.2 75.0 3.0 2.8 3.2 57.0 57.2 57.8 3.2 56.5 262 268 - 4.7 H 75.0 75.0 75.0 75.0 75.0 75.0 55.4 4.7 75.0 75.0 75.0 15.4 75.0 75.0 75.0 75.0 75.0 269 273 * 2.5 P 18.5 60.2 2.7 32.5 46.2 60.0 30.2 2.0 19.3 32.2 32.7 2.2 17.4 16.8 18.2 32.7 16.2 274 277 E 4.8 H 0.0 0.0 0.0 0.0 0.0 0.2 0.2 0.0 0.0 0.0 0.0 0.0 18.8 18.8 0.0 0.0 0.0 278 280 C 4.5 M 4.0 5.8 3.7 2.0 0.3 5.2 1.3 27.0 4.0 5.2 5.5 3.7 27.0 4.3 4.0 5.2 3.3 281 289 * 3.0 P 3.1 75.0 2.7 75.0 19.6 75.0 22.1 20.0 10.2 75.0 75.0 4.3 3.6 2.7 2.8 75.0 3.0 290 296 - 4.5 M 75.0 75.0 75.0 75.0 55.4 75.0 5.4 3.9 75.0 75.0 75.0 34.4 75.0 75.0 75.0 75.0 75.0 297 313 * 3.1 M 10.9 75.0 2.1 75.0 19.1 75.0 3.2 27.7 5.7 75.0 75.0 19.5 2.5 32.9 2.5 75.0 2.2 314 329 H 4.6 H 9.9 2.4 0.0 2.3 0.4 2.6 0.4 14.1 0.4 3.0 3.0 14.2 4.7 5.2 0.1 3.6 0.0 330 351 * 2.8 P 52.8 42.9 19.9 26.2 26.4 42.7 36.0 15.0 52.8 23.7 22.6 25.8 17.0 17.3 32.7 22.7 46.1 354 355 H 4.5 M 3.0 75.0 2.0 5.5 75.0 75.0 3.0 5.0 3.5 3.5 3.0 5.0 2.5 3.0 2.0 3.0 3.5 356 368 * 2.1 P 2.7 75.0 9.0 16.6 48.2 75.0 3.9 1.5 8.3 22.0 16.2 1.8 9.2 4.0 8.8 16.3 19.3 369 375 H 4.4 M 3.1 55.1 3.1 3.3 2.6 55.0 1.9 0.3 2.6 2.0 1.7 1.6 3.4 3.8 13.7 1.4 3.9 376 379 * 2.4 P 58.0 21.5 20.5 4.8 58.0 22.2 19.8 1.8 39.5 21.2 21.8 21.8 20.2 38.8 2.2 21.2 20.2 380 382 C 4.5 M 4.3 7.3 6.3 6.0 75.0 5.3 52.7 28.7 4.3 8.8 6.7 51.7 4.3 28.0 5.3 7.7 6.5 384 388 E 4.9 H 0.0 0.0 0.0 0.0 0.0 0.0 0.6 0.0 0.0 0.0 0.0 0.2 0.2 0.6 0.0 0.0 0.0 390 394 * 2.3 P 45.0 3.6 31.4 1.8 30.6 3.2 30.6 32.0 31.6 2.4 3.6 46.8 31.8 33.2 31.2 3.2 31.2 395 407 H 4.9 H 1.1 4.2 0.9 2.1 1.2 4.0 2.4 1.5 0.8 2.5 2.5 1.7 1.4 1.9 1.2 2.5 1.1 408 411 * 3.2 M 19.8 75.0 0.5 75.0 0.8 75.0 75.0 1.8 0.5 75.0 75.0 1.8 20.0 21.8 2.2 75.0 1.5 412 422 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.2 75.0 75.0 75.0 68.8 75.0 75.0 75.0 75.0 75.0 423 426 * 3.3 M 75.0 2.2 75.0 2.2 75.0 2.8 1.0 1.8 75.0 3.2 2.5 3.9 75.0 75.0 75.0 2.8 75.0 427 430 E 4.6 H 19.5 0.0 2.8 0.0 3.5 0.0 3.5 1.8 2.0 0.0 0.0 3.2 3.0 2.5 3.0 0.0 2.5 431 435 * 1.6 P 18.0 3.8 18.7 2.8 16.4 4.4 3.8 16.4 16.2 2.4 2.2 16.2 16.6 16.8 16.6 3.6 17.4 436 438 H 4.4 M 3.0 1.3 3.7 27.0 3.0 1.3 5.0 2.3 3.3 3.3 2.7 3.7 3.7 3.3 4.3 3.3 27.0 440 442 - 4.5 M 75.0 75.0 75.0 75.0 75.0 75.0 5.7 2.7 75.0 75.0 75.0 4.0 75.0 75.0 75.0 75.0 75.0 443 448 * 2.8 P 5.0 75.0 3.7 75.0 4.6 75.0 5.5 3.5 4.9 75.0 75.0 4.5 4.7 5.1 4.4 75.0 3.5 449 450 C 4.6 H 8.5 1.0 5.0 0.5 8.0 1.0 2.0 8.0 5.5 2.5 2.0 5.0 8.0 6.5 8.8 0.5 8.5 451 454 * 2.3 P 0.5 57.2 1.8 57.0 38.5 57.2 3.0 0.5 1.5 57.0 6.9 1.0 1.5 1.8 1.8 57.2 2.5 455 458 E 4.6 H 0.8 2.0 0.2 1.2 0.5 0.8 0.0 0.0 0.2 1.2 1.2 0.0 0.2 18.8 0.0 1.2 0.0 459 460 C 4.5 M 41.0 0.0 3.5 2.0 2.5 2.0 2.5 3.0 38.5 1.5 1.5 5.0 3.5 4.5 0.0 1.0 2.0 461 466 * 3.5 M 75.0 39.5 75.0 2.7 38.5 4.2 6.2 4.5 75.0 29.2 39.7 5.5 75.0 75.0 75.0 39.3 75.0 467 475 - 4.3 M 75.0 12.8 75.0 50.7 75.0 4.7 3.4 52.4 75.0 75.0 75.0 29.2 75.0 75.0 75.0 75.0 75.0 476 501 * 3.5 M 8.9 72.6 3.0 72.2 75.0 72.5 63.8 17.2 5.5 75.0 75.0 40.1 17.0 11.9 3.5 75.0 3.8 502 504 - 4.2 M 75.0 75.0 5.0 75.0 75.0 75.0 75.0 6.0 4.7 75.0 75.0 4.7 75.0 75.0 29.2 75.0 75.0 505 507 * 3.9 M 75.0 75.0 6.0 75.0 75.0 75.0 75.0 2.3 75.0 75.0 75.0 3.3 5.3 5.7 6.8 75.0 75.0 508 530 - 4.5 M 75.0 75.0 68.9 75.0 31.9 75.0 53.1 5.2 68.8 75.0 75.0 31.7 69.0 69.0 75.0 75.0 75.0 533 541 * 3.2 M 18.2 75.0 1.9 75.0 11.3 75.0 75.0 0.9 2.3 75.0 75.0 9.1 10.3 9.9 2.6 75.0 4.2 543 544 * 2.3 P 75.0 40.5 6.0 41.0 1.0 42.0 40.0 1.5 6.0 40.5 39.5 3.0 3.0 4.5 4.5 40.0 3.0 545 565 H 4.6 H 0.6 2.2 0.4 12.7 1.0 2.3 0.5 0.1 0.5 2.6 2.5 4.0 0.7 11.7 0.3 2.1 0.6 567 569 C 4.6 H 5.7 6.8 5.7 4.0 6.7 6.0 1.7 0.7 6.5 30.3 4.3 3.3 6.8 75.0 52.3 26.7 2.7 571 572 C 4.4 M 5.0 8.5 4.5 8.8 5.0 6.5 5.0 0.0 4.0 75.0 75.0 2.0 4.0 75.0 75.0 75.0 2.5 573 580 * 3.5 M 56.8 6.0 57.1 3.6 5.2 6.4 41.6 7.2 57.0 75.0 75.0 6.3 58.0 75.0 75.0 75.0 57.2 581 589 - 4.6 H 75.0 75.0 75.0 75.0 44.6 75.0 75.0 5.1 75.0 75.0 75.0 4.3 75.0 75.0 75.0 75.0 75.0 591 594 - 4.2 M 3.5 75.0 3.2 75.0 75.0 75.0 75.0 10.1 4.2 75.0 75.0 75.0 7.2 75.0 75.0 75.0 75.0 596 618 - 4.5 M 69.0 72.3 66.2 20.9 75.0 72.2 75.0 5.7 69.1 75.0 75.0 36.0 75.0 75.0 75.0 75.0 65.7 >>>>>>