Reading input alignment file to find conserved blocks of secondary structure The input structure based alignment from Comparer _____________________________________________ >P1;d1d4oa- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCC---HHHHHHHHHHCCEEEEEECHHHHHC-CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHH----CCCHHHEEE---------HHHHHHHHHH-----------CCEEEEECCCHHHCCHHHHCCCCCCCCCCCCCHHHCCCEEEEECCCCCC--------------------CCCCCCHHHHCCCEEEEECCHHHHHHHHHHHHHCC--------- >P1;d1jsca1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---HHHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCHHHHHHHHHHHC-----CCCEEECCCCC----CCCCCC----------CCCEEEECCC---CCCHHHHHHHHH-----------CCEEEEECCCCCHHHHCCHHHCCHHHHHHHHCCCCEEEEEECCC-CCCCCCCC-CEEEE-C-----CHHHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCC--------- >P1;d1m2ka1 -----------------------------------------------------CC-HHHHHHHH-------------CCC----CEEEEECHHHHHHHCC-CCCCCC-------------CCH------H-HH-CCHHHHCCHHHHHH-------------CHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHC----CCEEEEEECCCCCHHHHCCCC--CEEECCEEEEEEEECCCCCEEECC----CCCC---CC-----------------------CCCCCC-----CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC---CHHHHHHHHHHC--C--CEEEEECCC---------CCC--CHHHC-------CEEEC----CCHHHHHHHHHH-----------HH-----HHHHC----------------------------------------------------------------------------------------------------- >P1;d1o97d2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCC------CEEEECHHHCC-HHHHHHHHHHHCC------CCEEEECHHHHHC--CCCC-CCCCCCCCCCCCCCCEEEECCCCC---HHHHHHHCCCC-----------CEEEECCCC--------------------------------CCHHHHCCC---EEECC------CHHHHHHHCCCC----------------------------------- >P1;d1ovma1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-CCCCCCCCCC---HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCC-CHHHHHHHHHHC-----CCEEEECHHHC----CCCCCC----------CCCCCCCCC--HHHCCHHHHHHHHC-----------CCEEEEECCCCCCCCCCC--------CCCCCCCCC-EEEECCC------EEEECCEEEECC-----CHHHHHHHHHHHHHCCC------CC---------------------- >P1;d1ozha1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---CCCCHHHHHHHC-CCCCC-CEEEEECHHHHCHH-HC-CCC-HHHHH-----CCCEEECHHHC----CCCCCC---------CCCCEEEECCCCC---CCHHHHHHHH-----------CCEEEEECCCHHHCCHH---HCCCC--------CCEEEEEECCCCCCCCCCCC-CEEEE-C-----CHHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHHHHHHCCCC--- >P1;d1ybha1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCHHHHHHHHHHHHHC-CEEEEECHHHCC---CHHHHHHHHHHH-----CCCEEECCCCC----CCCC-C----------CCCEEEECCC---CCCHHHHHHHHH-----------CCEEEEECCCCCHHHHCCHHHCCC-----------CEEEEECCCCCCCCCCCC-CEEEE-C-----CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC----CCCCC >P1;d1yc5a1 -----------------------------------------------------CCCHHHHHHHH-------------HCC----CEEEEECHHHCHHHCC-CCC----------------------------------CCCCHHHHHH-------------CHHHHHHHHHHHCHHHHHC----CCCHHHHHHHHHHHC----CCCCEEEECCCCCHHHHCCCC--CEEECCEEEEEEEECCCCCEEEHH----HHHHHCCCC-----------------------CCCCCC-----CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC---CHHHHHHHHHHH--C--CEEEEECCC---------CCC--CHHHC-------CEEEC----CCHHHHHHHHHH-----------HH-----CC-------------------------------------------------------------------------------------------------------- >P1;d1ytla1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCEECC------CHHHHHHHHHHCCCEEEEECCCCC--HHHHHHHHHHHCC------CCEEEEEC-------CHHHHHHHC-----CCHHHCEEEC-------HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHH-------HCCCCEEEECCCCCCC------CCCEECCCCHHHHHHHHHHHHHHHHHC---------------------------------- >P1;d1zpda1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCC---HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-CHHHHHHHHHHH-----CCCEEEEHHHC----CCCCCC----------CCCEEEEEC--HHHCCCCHHHHHHH-----------CCEEEEECCCCCCCCCCC--------CCCCCCHHH-EEEECCC------EEEECCEEEECC-----CHHHHHHHHHHHCCCCC------HHHHHHHHCCCCCCC-CCCCCCCC >P1;d2fn3a1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHH-CCHHHHHHHHHHH-----CCCEEECCCC---CCCCCCC----------CCCCEEEECC----CCHHHHHHHHCC-----------CCEEEEECCCCCCCC----------CCCCCCCCCCCCEEEEEECCHH----------------------HHH------HCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCC >P1;d2ihta1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC---C-CHHHHHHHHHHHHHHCCCEEEEECHHHHHCC-CHHHHHHHHHHH-----CCCEEECCCCC----CCCC-C---------CCCCEEEECCCCCCCCCCCCCCCCCC-----------CCEEEEECCCHHHCCCC---CCCCCC-------CCEEEEEECCCCCCCCCCCC-CEEEE-C-----CHHHHHHHHHHHCCCC-CCCCCC----CCHHHHHHHHHHH--CC--- >P1;d2ji7a1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHCC-CHHHHHHHHHHH-----CCCEEECCCCC----CCCCCC----------CCCCC----------HHHHHHHHHH-----------CCEEEEECCCCCHHHHHHCCHHHCC-------CCCEEEEEECCHHHCCCCCCC-CEEEE-C-----CHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >P1;d2vk8a2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCCCCCCCCC---HHHHHHHHHHHHHHHHHCCCEEEEECHHHHHCC-CHHHHHHHHHHH-----CCCEEECCCCC----CCCCCC----------CCCEEEECC--HHHCCHHHHHHHHC-----------CCEEEEECCCCCCCCCCC--------CCCCCCCCC-EEEECCC------EEEECCEEEECC-----CHHHHHHHHCCCCCCCC------CCCCCC---CCCCCC-CCCCCC-- >P1;d4bn4a- ---------------------------------------------------CCCCHHHHHHHHHC-----------CCCC----CEEEEECHHHHHHHCC-CCCCCC------------CCCHHHHHCCC--CCCCHHHHHCHHHHHH-------------CCHHHHHHHHHHCC--CCC----CCCHHHHHHHHHHHC----CCEEEEEECCCCCHHHHCCCCHHHEEECCEEEEEEEECCCCCEEEHHHHHHHHHC---------------------------CCCCCCCCC-----CCCEEEEECCCCCCCCHHH-HHHHHHHHHCCEEEEECCCCCCC---CHHHHCCCCCC---C--CCEEEEECC---------CCH--HHHHCCCC---CEEEEE----CCHHHHHHHHHH-----------HH-----CCHHHHHHHHHHHHC------------------------------------------------------------------------------------------- >P1;d4fega2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCHHHCCCCCC---CCCCHHHHHHHHHHHHHCCCEEEEECHHHC--C-CHHHHHHHHHHH-----CCCEEECHHHC----CCCCCC----------CCCCCCCCCC---CCCHHHHHHHHH-----------CCEEEEECCCCCCCCCC---CCCC--------CCCEEEEEECCHHHCCCCCCC-CEEEE-C-----CHHHHHHHHHHCCC--CCCCC--HHHHHHHHHHHHHHHHHHHHHC-- >P1;d4kxqa1 ----------------------------------------------CCCCCCCCCHHHHHHHHH-------------HCC----CEEEEECHHHHHHHCC-CCCCC-------------CCCHHHHHHHHCCCCCCHHHHHCHHHHHH-------------CCHHHHHHHHHHCC--CCC----CCCHHHHHHHHHHHC----CCEEEEEECCCCCHHHHHCCC--CEEECCEEEEEEEECCCCCEEEHHHCHHHHHC---------------------------CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCC---CHHHHHHHCCC---C--CCEEEEECC---------CC-----CCCCC-----CEEEE----CCHHHHHHHHHH-----------HH-----C--HHHHHHCC--CCCCC-------------------------------------------------------------------------------------CCC >P1;d5oj7a1 --------------------------------------------CCCCCCCCHHHHHHHHHHHH-------------CCC----CEEEEECHHHCHHHCC-CCCCCC------------CCCH------HHHCCCC---CCCHHHHHHCH----------HHHHHHHHHHHHHHHHHHCC----CCCHHHHHHHHHHHC----CCEEEEEECCCCCHHHHHCCC--CEEECCEEEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCH---HHHHHHHHHHHC--C--CCEEEECCC---------CCC--CHHHC-------CEEEC----CCHHHHHHHCCC-----------C---------CC----------------------------------------------------------------------------------------------------- >P1;d6eo0a1 ------------------------------------------------CCCCCCCCCHHHHHHH-------------CCC----EEEEEECCHHHHCCCC-CCCCC--------------HHH------E-ECCEEHHHHCCHHHHHH-------------CHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCC--CEEECCEEEEEEEECCCCCEEECCCC--CCCHHHCCCCCCCC--------CCCCCCCCHHHCCCCC---CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC---CHHHHHHHHHCC--C--CCEEEEECC---------CCC--CHHHC-------CEEEE----CCHHHHHHHHHC---------------------------------------------------------------------------------------------------------------------------- >P1;d6xxja- CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECHHHHHCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCEEEECCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC--------CCHHHHHHHCCC---CEECCC--CC-------------CCHHHHHHHHHHHHCC-----------------------------------CCCCCC---------HHHHHHHHHHHHCCCEEEEEECCH--H---HHHHHHHHHHCC--CCCCEEEEEECCCHHHCCCCCCCHHHHHHHCCCCCCCCCEEEE----CCHHHHHHHHHH-----------HC-----HHHHCCCCC------------------------------------------------------------------------------------------------- PSA >P1;d1d4oa- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------c826507---3750172069092000000460041-7006001400610475a1601000068004887205630170----906992128---------09601a4048-----------030000010121000104558a1702b5600201407200001872854--------------------82727030022930000233047004402730889--------- >P1;d1jsca1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------b5---99624700560071035094000000640484a4026106500430-----20000017703----a0084a----------1810032005---803400430044-----------01000002060387109736800430550185930000000756-41374080-31102-6-----4005004500830---8529618a01740660385568--------- >P1;d1m2ka1 -----------------------------------------------------26-a7026201-------------609----2000000240043081-2234a9-------------800------1-64-46275012280187-------------3245005001500740081----801600600120171----900300001010100430809--50010241013040363c24562a----8039---05-----------------------721509-----64a3300000109b2914871375047104504000001141546---301400420385--a--120000158---------606--02640-------41113----550061035005-----------40-----48537----------------------------------------------------------------------------------------------------- >P1;d1o97d2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------680539------30000087067-6a20630460081------a010001520164--8206-621006705606504000010806---86004005407-----------302001676--------------------------------b05018105---62453------403731764875----------------------------------- >P1;d1ovma1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------b-aa8a97a808---a8327503530392048083100000110263a-149403701941-----61000007404----900639----------6a2055203--05608a60381003-----------050000000525680048--------642706691-0010118------2011497418a0-----10620060015004538------6a---------------------- >P1;d1ozha1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------b6---b00579106600-20880-20000004302277-07-004-01830-----30000004603----b00529---------719200020166b---8100250053-----------05000000020901504---70177--------90300000266076394060-51303-1-----40250044006409---852a13860201761662377787958--- >P1;d1ybha1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------591789504500710250-40000002705a---06a105400610-----30000118805----8005-a----------3a10042005---900600420055-----------0500000106037610a7386005-----------500001657821343190-61303-1-----40340044007104846811805b03840652297578----9878d >P1;d1yc5a1 -----------------------------------------------------68075015106-------------707----20000003400421a0-672----------------------------------9213193056-------------5134006205810140181----822400300140185----930500001110200320908--400101200350302837490708----503820695-----------------------820406-----6383100040106a2a037a2274055004603000000050635---300500330263--9--060000177---------905--13810-------42105----150340042016-----------42-----a1-------------------------------------------------------------------------------------------------------- >P1;d1ytla1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------707408------605400510581921000002404--9600410360062------b0300008-------802620682-----a13b503514-------18501850265917026685104000000064860150032047-------7083050000012203------403200252586364016105400831---------------------------------- >P1;d1zpda1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------8906---6920550061035106b3820000002507709-049003500530-----10000002805----81044b----------2a1000114--07603310650173-----------030000000425692039--------664524783-1030326------10403b561540-----20640033007509514------200622672a3ba49-79999889 >P1;d2fn3a1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------883278950770182027085000000130243-a029302400440-----1010100041---5550054----------8130124604----10234006304a-----------131000000100618----------6935764118b05000004478----------------------118------50312711304043005200640752b3a31946a >P1;d2ihta1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------55---b-7158105600720380820000001004719-037304600430-----30000005806----8005-b---------b270308115894b719261252034-----------02000000053925050---706266-------a0510000379162493080-41301-0-----50340063039206a2-b51920----7065137257748--8a--- >P1;d2ji7a1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------6---760798207500710480740000006703a28-05a204200451-----2000001a806----700449----------06300----------4303a40025-----------0200000105038504406794055-------640500001677a20642160-40304-0-----20620033037309--b19615990385047406955786688787b >P1;d2vk8a2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------b98997859807---993076015302620590620000000203759-058007600630-----40000003505----900838----------381103301--06705970382004-----------0400000014455a0017--------731616194-1020138------30306a641790-----10220045019058007------b0854a---109878-abab8a-- >P1;d4bn4a- ---------------------------------------------------e8360740044057-----------4506----5000000130031081-412319------------b8021341876--b055140002381048-------------41410090035105--952----701200000200241----a002100010006006406049830020203044030073717160850483023---------------------------862050672-----90100040105c2923a41-83287004502000000030646---20160034058---6--000000166---------423--1018752a---511134----760370053007-----------30-----802950770296213------------------------------------------------------------------------------------------- >P1;d4fega2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------a879978969a4---3717a8104500720380950000005806--6-01a102500510-----10000016505----710349----------0600000039---703400550066-----------02000001040550684---7105--------807400001446821341391-41204-0-----10340054028409--72a44--9116702730891376357688-- >P1;d4kxqa1 ----------------------------------------------083397056372016106-------------617----3000000130025082-42335-------------a800054059426b056250003172048-------------21610050033001--6b4----901100400110083----93011000001030055090a--401201100640201328351727504b3049---------------------------5620405606aa374000003010492c02790560188047504000001120627---20160044036---8--100000156---------50-----75150-----00513----651291045003-----------30-----6--c6127209--a894b-------------------------------------------------------------------------------------8ac >P1;d5oj7a1 --------------------------------------------11b08946873264027005-------------806----5000000130001090-31341a------------8401------2374a18---42526504847----------60123100100000660271----712500510160054----910120001100100620709--4011012002301027372357065018306a406a0a3927a10040206057940680610507-----6465400030107739097a4076034305702000001120556---200100420583--9--130000115---------804--03710-------71204----040050027031-----------9---------ba----------------------------------------------------------------------------------------------------- >P1;d6eo0a1 ------------------------------------------------8855165683036406-------------808----1000000340044090-52567--------------931------7-00736054013462067-------------3201000000320330483----8106005101801840687a24000001110100830909--41220130003030563543252572--2018307b405386--------b2a5180557700208---7aa171100030204b2a16994453077116704000001130647---300500260166--a--210000166---------506--10460-------60026----140073025107---------------------------------------------------------------------------------------------------------------------------- >P1;d6xxja- b689b6588878a9aa8598478876066a6947860217235444b42320340281044006302595862785063093310000000337000280051023002250000000302000100010216069277939a88186743432551103680240492015005500721656a300004006200730836--------500011025280---300026--07-------------9510060166047637-----------------------------------808056---------84057202210330100000030a--5---004200500342--9002100000735596a44300507512864003870910003----350481034005-----------10-----03632a405------------------------------------------------------------------------------------------------- Translating the sequences --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*******---HHHHHHHHH*CC*EEEE*C******-**HHHHHHHHH**********EEE*C****************----********E---------*HHHHHHHH*-----------*******CC****************************************--------------------***********************************--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**---****HHHHHHHHHHHH*CC*EEEE*C*********HHHHHHHHH**-----CC*EEE*C***----***CC*----------*****EE***---*C*HHHHHHHH*-----------*******CC***********************************-********-*****-*-----*************---**********************--------- -----------------------------------------------------**-********-------------***----****************-******-------------***------*-**-**************-------------*******************----***************----*********************--************************----****---**-----------------------******-----******************HHHHHHHHHHHH*CC*EEEE*C*****---*HHHHHHHHH**--*--C**EEE*C*---------CC*--*****-------*EE**----*C*HHHHHHHH*-----------**-----*****----------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------*EEE*C*****-***HHHHHHHH**------CC*EEE*******--***C-****************EE******---HHHHHHH****-----------*****CC**--------------------------------*********---*****------************----------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*-**********---****HHHHHHHHHHHH*CC*EEEE*C*******-*HHHHHHHHH**-----CC*EEE*****----***CC*----------*********--***C*HHHHHHHH*-----------*******CC*********--------*********-*******------************-----*****************------**---------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**---****HHHHHHH*-****C-*EEEE*C*******-**-***-HHH**-----CC*EEE*****----***CC*---------******EE*****---**HHHHHHH*-----------*******CC********---*****--------********************-*****-*-----**************---***************************--- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------****HHHHHHHHHHHH*C-*EEEE*C*****---*HHHHHHHHH**-----CC*EEE*C***----***C-*----------*****EE***---*C*HHHHHHHH*-----------*******CC***************-----------******************-*****-*-----**************************************----***** -----------------------------------------------------***********-------------***----****************-***----------------------------------**********-------------*******************----***************----*********************--************************----*********-----------------------******-----******************HHHHHHHHHHHH*CC*EEEE*C*****---*HHHHHHHHH**--*--C**EEE*C*---------CC*--*****-------*EE**----*C*HHHHHHHH*-----------**-----CC-------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------******------*HHHHHHHHH*CC*EEEE*C****--***HHHHHHHH**------CC*EEE*C-------*********-----*******EE*-------*HHHHHHHH*******************CC**************-------****************------***************************---------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------****---****HHHHHHHHHHH**CC*EEEE*C*******-*HHHHHHHHH**-----CC*EEE*****----***CC*----------*****EE**--***C***HHHHHH*-----------*******CC*********--------*********-*******------************-----*****************------***************-******** ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*****HHHHHHHHHHHH*CC**EEE*C******-**HHHHHHHHH**-----CC*EEE*C**---*****CC----------******EE**----*C*HHHHHHH**-----------*******CC******----------**********************----------------------***------*********************************** ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------**---*-**HHHHHHHHHHHH*CC*EEEE*C*******-*HHHHHHHHH**-----CC*EEE*C***----***C-*---------******EE*******C**********-----------*******CC********---******-------********************-*****-*-----****************-******----*************--**--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------*---****HHHHHHHHHHHH*CC**EEE*C*******-*HHHHHHHHH**-----CC*EEE*C***----***CC*----------*****----------*HHHHHHHH*-----------*******CC****************-------*********************-*****-*-----**************--******************************* --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------************---****HHHHHHHHHHHH*CC*EEEE*C*******-*HHHHHHHHH**-----CC*EEE*C***----***CC*----------*****EE**--***C*HHHHHHHH*-----------*******CC*********--------*********-*******------************-----*****************------******---******-******-- ---------------------------------------------------**************-----------****----****************-******------------***********--****************-------------**************--***----***************----*******************************************************---------------------------*********-----****************HHH-HHHHHHHH*CC*EEEE*C*****---*HHHH******---*--CC*EEE*C*---------CC*--********---**EE**----*C*HHHHHHHH*-----------**-----CC*************------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------************---****HHHHHHHHHHHH*CC*EEEE*C****--*-*HHHHHHHHH**-----CC*EEE*****----***CC*----------**********---*C*HHHHHHHH*-----------*******CC********---****--------*********************-*****-*-----**************--*****--**********************-- ----------------------------------------------******************-------------***----****************-*****-------------*****************************-------------**************--***----***************----*********************--********************************---------------------------******************************HHHHHHHHHH***CC*EEEE*C*****---*HHHHHHH***---*--CC*EEE*C*---------CC-----*****-----*EE**----*C*HHHHHHHH*-----------**-----C--********--*****-------------------------------------------------------------------------------------*** --------------------------------------------********************-------------***----****************-******------------****------*******---***********----------********************----***************----*********************--******************************************************************-----******************HHHHHHHHHHH**CC*EEEE*C*****---*HHHHHHHHH**--*--CC*EEE*C*---------CC*--*****-------*EE**----*C*HHHHHH***-----------*---------**----------------------------------------------------------------------------------------------------- ------------------------------------------------****************-------------***----****************-*****--------------***------*-*****************-------------*******************----****************************************--**************************--**************--------****************---********************HHHHHHHHHHHH*CC*EEEE*C*****---*HHHHHHHHH**--*--CC*EEE*C*---------CC*--*****-------*EE**----*C*HHHHHHHH*---------------------------------------------------------------------------------------------------------------------------- ***********************************************************************************************************************************************************************************************************--------************---******--**-------------****************-----------------------------------******---------HHHHHHHHHHHH*CC*EEEE*C**--*---*HHHHHHHHH**--***C**EEE*C**********CC****************EE**----*C*HHHHHHHH*-----------**-----*********------------------------------------------------------------------------------------------------- 52467.tem _________________________________ -----------------------------------------------------***********-------------***----****************-*****--------------***------*--*-**--**********-------------**************--***----***************----*********************--************************----****----------------------------******-----******************HHHHHHHHHHHH*CC*EEEE*C*******-*HHHHHHHHH**--*--CC*EEE*C***----***CC*--*****-*******EE***-*-*C*HHHHHHHH*-----------*******CC****************-***************************-*****-*-----**************************************-******-- Structural block scores 0 52 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 72.6 75.0 65.7 63.2 68.4 6.2 53 63 * 4.0 M 75.0 75.0 10.1 75.0 75.0 75.0 75.0 3.5 75.0 75.0 75.0 75.0 75.0 75.0 3.0 75.0 3.4 3.3 4.3 2.6 64 76 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 64.3 75.0 75.0 75.0 75.0 4.6 77 79 * 4.0 M 75.0 75.0 5.0 75.0 75.0 75.0 75.0 4.7 75.0 75.0 75.0 75.0 75.0 75.0 3.7 75.0 4.7 4.7 5.3 3.0 80 83 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.0 84 99 * 4.0 M 75.0 75.0 1.5 75.0 75.0 75.0 75.0 1.7 75.0 75.0 75.0 75.0 75.0 75.0 1.4 75.0 1.5 1.2 1.6 1.4 101 105 * 4.0 M 75.0 75.0 4.3 75.0 75.0 75.0 75.0 33.0 75.0 75.0 75.0 75.0 75.0 75.0 2.2 75.0 3.4 2.4 5.0 2.2 106 119 - 4.8 H 75.0 75.0 70.3 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 65.8 75.0 70.4 65.6 75.0 0.9 120 122 * 4.1 M 75.0 75.0 2.7 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.3 75.0 2.7 1.7 4.3 0.7 123 128 - 4.6 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.0 75.0 3.8 75.0 75.0 0.3 130 131 - 4.4 M 75.0 75.0 40.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.0 5.0 37.5 1.5 134 135 * 4.1 M 75.0 75.0 5.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 5.0 75.0 5.5 4.5 4.5 7.5 136 137 - 4.3 M 75.0 75.0 4.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.5 75.0 3.5 75.0 2.5 4.5 138 147 * 4.0 M 75.0 75.0 3.4 75.0 75.0 75.0 75.0 3.9 75.0 75.0 75.0 75.0 75.0 75.0 2.6 75.0 2.5 11.1 3.3 7.0 148 160 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 59.0 75.0 3.4 161 174 * 4.0 M 75.0 75.0 2.3 75.0 75.0 75.0 75.0 2.6 75.0 75.0 75.0 75.0 75.0 75.0 2.4 75.0 1.6 1.0 1.0 2.9 175 176 - 4.3 M 75.0 75.0 2.0 75.0 75.0 75.0 75.0 2.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.0 1.5 2.5 177 179 * 4.0 M 75.0 75.0 3.0 75.0 75.0 75.0 75.0 3.3 75.0 75.0 75.0 75.0 75.0 75.0 5.3 75.0 7.2 3.3 5.0 3.0 180 183 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.5 184 198 * 4.0 M 75.0 75.0 2.2 75.0 75.0 75.0 75.0 2.5 75.0 75.0 75.0 75.0 75.0 75.0 1.3 75.0 1.9 2.5 2.9 2.4 199 202 - 4.7 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 5.2 4.2 203 223 * 4.0 M 75.0 75.0 1.9 75.0 75.0 75.0 75.0 2.1 75.0 75.0 75.0 75.0 75.0 75.0 1.9 75.0 2.3 1.9 2.4 33.3 224 225 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 8.5 75.0 75.0 75.0 75.0 75.0 226 249 * 4.1 M 75.0 75.0 3.1 75.0 75.0 75.0 75.0 2.8 75.0 75.0 75.0 75.0 75.0 75.0 2.5 75.0 2.5 2.4 2.5 48.0 250 253 - 4.4 M 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 4.2 75.0 5.1 3.5 39.8 1.5 254 257 * 4.0 M 75.0 75.0 5.0 75.0 75.0 75.0 75.0 4.0 75.0 75.0 75.0 75.0 75.0 75.0 2.0 75.0 4.0 4.9 2.8 3.2 258 285 - 4.7 H 75.0 75.0 69.8 75.0 75.0 75.0 75.0 62.4 75.0 75.0 75.0 75.0 75.0 75.0 72.6 75.0 72.5 4.1 25.1 57.4 286 291 * 4.1 M 75.0 75.0 4.0 75.0 75.0 75.0 75.0 3.3 75.0 75.0 75.0 75.0 75.0 75.0 3.2 75.0 2.8 3.2 2.8 75.0 292 296 - 4.7 H 75.0 75.0 75.0 75.0 62.3 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 62.3 46.8 62.1 6.6 75.0 48.5 75.0 297 314 * 3.0 P 48.1 52.4 3.6 75.0 22.5 51.9 59.6 3.2 51.4 43.9 55.7 55.8 55.6 18.1 11.0 18.3 2.6 3.6 3.4 51.5 315 326 H 4.7 H 21.3 2.8 3.9 40.1 3.4 9.5 3.4 3.9 14.7 2.7 4.1 3.1 3.6 3.1 10.2 3.4 4.6 4.1 4.7 2.8 328 329 C 4.8 H 4.5 4.5 2.0 75.0 4.0 37.5 37.5 1.5 5.0 5.5 4.0 4.0 3.5 3.0 1.0 4.5 2.0 1.0 2.0 0.5 331 334 E 4.9 H 0.0 0.0 0.0 0.8 0.2 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 337 343 * 1.9 P 12.9 5.2 24.3 15.6 3.4 3.6 24.9 24.1 24.1 4.3 12.6 3.1 5.2 3.7 24.1 25.0 23.9 24.0 24.3 45.1 346 354 H 4.8 H 1.9 2.7 1.6 3.0 4.1 18.9 3.6 1.4 2.2 2.9 2.7 3.0 3.1 3.6 2.1 2.7 2.0 1.3 1.6 1.6 355 356 * 1.6 P 0.5 1.5 6.5 38.0 2.5 1.5 0.5 4.5 38.5 1.5 2.0 1.5 3.0 1.5 41.5 0.5 40.5 5.5 6.0 3.0 357 358 - 4.9 H 5.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 360 361 - 4.7 H 5.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 0.0 362 363 C 4.7 H 3.0 1.0 1.5 5.2 3.5 1.5 1.5 3.0 5.8 0.5 0.5 1.5 1.0 2.0 0.0 0.5 0.5 2.0 1.5 1.5 365 367 E 5.0 H 0.0 0.0 0.0 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.3 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 370 372 * 2.4 P 2.7 3.3 52.7 1.0 2.7 3.0 4.3 52.3 75.0 4.3 26.7 4.7 4.7 3.3 52.0 3.3 52.0 51.7 52.0 4.3 373 376 - 4.6 H 6.8 75.0 75.0 40.0 75.0 75.0 75.0 75.0 75.0 75.0 40.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 7.4 377 379 * 2.5 P 2.3 3.5 75.0 3.3 3.0 3.8 2.7 75.0 3.3 3.0 1.7 2.7 2.3 3.0 75.0 2.7 75.0 75.0 75.0 2.3 380 381 C 4.6 H 4.5 6.0 3.0 40.5 4.5 3.5 40.0 4.5 4.0 4.0 4.5 40.0 4.0 5.5 3.0 3.5 2.5 4.0 2.5 2.5 383 384 - 4.5 M 4.0 75.0 75.0 1.5 75.0 75.0 75.0 75.0 7.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 6.0 385 389 * 3.8 M 60.0 75.0 2.4 2.6 75.0 75.0 75.0 2.6 60.4 75.0 75.0 75.0 75.0 75.0 3.4 75.0 32.6 2.2 2.2 4.2 391 397 * 2.7 P 4.1 22.9 64.9 3.0 24.8 13.4 23.5 64.9 4.9 23.4 12.9 14.1 22.7 23.3 34.8 22.3 53.6 65.3 65.1 4.0 398 399 E 4.5 M 41.5 2.5 1.0 0.0 3.5 1.0 3.0 1.5 3.0 0.5 5.0 4.5 75.0 3.0 1.0 0.0 2.5 1.5 0.0 0.0 400 402 * 2.5 P 75.0 1.7 26.3 0.3 26.0 2.3 1.7 26.7 51.3 26.7 26.3 4.7 75.0 25.3 27.3 4.0 26.3 26.3 27.7 26.0 409 416 H 4.8 H 4.3 1.9 1.9 2.9 3.6 1.6 2.1 1.8 3.6 2.9 2.5 2.6 2.8 3.6 2.2 2.5 2.6 2.1 2.2 2.5 418 428 - 4.9 H 75.0 75.0 75.0 62.0 75.0 75.0 75.0 75.0 4.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 429 435 * 2.5 P 0.4 0.1 54.1 22.1 0.7 0.7 0.7 54.4 0.6 0.4 0.7 0.3 0.3 0.6 54.0 0.3 54.0 65.6 75.0 53.7 436 437 C 4.5 M 0.5 1.0 6.0 3.5 0.0 0.0 0.5 5.8 0.0 0.0 0.0 0.0 0.5 0.5 4.0 0.5 40.5 75.0 75.0 1.5 438 453 * 3.0 P 2.8 4.1 61.9 66.4 35.2 16.8 8.6 75.0 12.2 35.3 47.9 17.2 4.1 35.1 17.4 21.6 19.2 67.0 75.0 44.1 455 481 * 3.5 M 13.8 5.8 75.0 51.2 21.5 21.7 27.0 75.0 29.1 21.9 19.8 22.0 19.2 21.6 75.0 19.1 75.0 75.0 75.0 75.0 483 487 * 3.2 M 75.0 1.4 75.0 18.4 5.8 2.4 2.6 75.0 1.4 5.7 75.0 1.8 2.2 5.7 75.0 2.2 75.0 75.0 75.0 75.0 490 494 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 5.6 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 495 532 * 3.4 M 8.8 9.5 75.0 52.8 39.0 9.3 3.9 75.0 50.2 15.1 19.7 13.3 8.0 20.8 75.0 11.4 75.0 75.0 75.0 75.0 534 539 * 4.0 M 75.0 75.0 75.0 75.0 75.0 18.7 41.5 75.0 75.0 8.5 5.1 41.9 7.2 10.4 75.0 6.2 63.8 75.0 75.0 75.0 540 541 - 4.3 M 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