Motif    Start   End  Length   Motif
Motif1    41     43     3      [AV][AQL][F]
Motif2    81     83     3      [H][RT][Y]
Motif3    93     95     3      [ALV][VTR][LVA]


Motif marked on the alignment

                                                  ***                 
d1b4ra  : ----------------------ATLVGPHG---PLASGQLAAFHIAAPL---PVTATRWD
d1l0qa  : ---------------PVYPSAD--FKSNITS-GYIFLSEPVQFTDLSK----DATEWKWD
d1wgoa  : CEGGVDMQQSQVQLQCPLTPPRGLQVSIQGEAVAVRPGEDVLFVVRQEQGDVLTTKYQVD


                              ***         ***                         
d1b4ra  : FGDGSAEVDAAGP----AASHRYVLPGRYHVTAVLALGAGSALLGTDVQVEA-------
d1l0qa  : FGDG---SSSKKQ----NPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS
d1wgoa  : LGDGFKAMYVNLTLTGEPIRHRYESPGIYRVSVRAENTAGHDEAVLFVQV---------