Reading input alignment file to find conserved blocks of secondary structure The input structure based alignment from Comparer _____________________________________________ >P1;d1so2a- ----------------------------------------------------------------------------------------------CHHHHHHHHH-----------HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHCCCC----------CCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCEECHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC--C----------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-CC--CCCC-CCCCC-CC-------CCHHHHHHHHHHHCHHHHHHHHHH-CCCCCCEECC---C-----C--EECH----HHHHHHHHHHHHC---------------------- >P1;d1taza- ------------------------------------------------------------------------------------------CCCCCCHHHHHHHC-----------CCCCCCCCHHHHHHHCC--CCHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHHHHCCC--------CCCCCCHHHHHHHHHHHC-CHHH-------------------------H--CHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH----CCHHHHHHC----------------------CCCHHHHHHHHHHHHHCCC-HHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H--HC-------------------------CCCHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-HC--CC-------C-CH-------HHHHHHHHHHHHHCHHHHHHHHHH-HHHHHHCCCC---HHHHHHH----HH----HHHHHHHHHHHHHH--------HHH---------C >P1;d1tbfa- ---------------------------------------------------------------------------------------------CHHHHHHHHHHHCCCCCHHH-HCCCCCCCCCCCCC------HHHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHHCCC-C--------CCCCCCHHHHHHHHHHHHHHHHCC---------------------------CCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-H--HCC------------------CCCCCCHHHHHHHHHHHHHHHHCHHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCC-HHHCHHHH-------HHHHHHHHHHHHHCHHHHHHHHHH-HC--------------HHHH-----H----HHHHHHHHHHHHHH--------HHC---------- >P1;d1u6za1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------CHHHHHHHHHHHH---C--------CCCHHHHHHHHHHHHHHHHHHHHHC-HHHCC---------------------------HHHHHHHHHHHHHCCCCCCCCC-----------------------------------------------CCHHHHHHHHHHHCCCCCCC---------HHHHHHHHHHHHCCCC--------------------CCC--CCCC-CCCCCC--------HHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCEEEEEECCCHHHHC-HHHHHHHHHHHHHHCCCCCCEEEEEECCCC----------------------------------------------------------------------------------------------------- >P1;d1vj7a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCHHHHHHHHHHHCC-----------------------------H-------------------HHHHHHHHHHHHHHHHCC--------CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCH--HHHCCC--CHHHHHHHHC-----------HHHHHHHHHHHHHCC------------------CCCCCCCCCCHHHHHHHHHHHHHHHHCCC--------------------------------HHHHHHHHHHCHHHHHHHC-------------------------CCHH----HHHHHHHHHHHHHC--------------------- >P1;d1vqra1 --------------------------------------------------------------------------------------------CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCC-CCHHHHHHHCCHHHCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCC------------------------------CHHHHHHHHC-CCCHHHHHHHHHHHHCCC---------CHHHHHCC----------------------------------------C-CCCCHHH---HCCCCHHHHHHHHHHHC--CCCHHHHHHHH------CCCCHH--HCC--------------CCCHHHHHHHHHHHHHHCCCCCCCH-----------------------HHHHHHHHHHHHCCCCCCCC-----------------------------------CCCCCCCHHHHHHCCC------------------------------------------------------------------ >P1;d1y2ka- --------------------------------------------------------------------------------------------CHHHHHHHHHHH-----------HCCCCCCCHHHHHHHCC--CCHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHHCCCC---------CCCCCCHHHHHHHHHHHHHHHCC-------------------------H--HHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHHC----------------------CCCHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H--HCCCCC--C----------CCCCCCCCHHHHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-HC--CCCC-CCCCC-CC-------CCHHHHHHHHHHHCHHHHHHHHHH-HCC--------------CCC----HH----HHHHHHHHHHHHHH--------CCC---------- >P1;d1ynba1 ------------------------------------------------------------------------------------------C--HHHHHHHHHHHHHHHCCCHHHHHHCCC----------CCCCHHHHHHHHHHHHHHHHHHC----CCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHH------------------CCC----CCHHHHHHHHCCCC----CCCCC--C------HHHHHHHHHHHHHHHH-HHHHHHCCC------------------------------------CHHHHHHH-CCCC----C---------------C-CHHHHHHHHHHHHHCCCC-------CC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d1z1la1 -----------------------------------------------------------------------------------------------CCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCC------HHHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHHCCC----------CCCCCCHHHHHHHHHHHHHHHHHH---------------------------CHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHHHH---------------------HCCHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H--HH-------------------CCC-CCHHHHHHHHHHHHHHHHCHHHHCC---------------------C-CHHHHHHHHHHHHHHHHHHHHH-CC---CCC--CCCCCCC--------CHHHHHHHHHHHCHHHHHHHHHH-HC--------------HHHH-----H----HHHHHHHHHHHHCC--------CCCCCCCCC---- >P1;d1zkla- ---------------------------------------------------------------------------------------------CHHHHHHHHHC-----------CCCCCCCCHHHHHHHCC--CCHHHHHHHHHHHHCCHHHHC-----CCCHHHHHHHHHHHHHCCCC---------CCCCCCHHHHHHHHHHHHHHHCC-------------------------H--HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHHH---HCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H--HH------------------CCCCCCCHHHHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-CC--CCCC-CCCCC-CC-------CCHHHHHHHHHHHCHHHHHHHHHH-HCCC-------------HHH----HH----HHHHHHHHHHHHHH--------CC----------- >P1;d2cqza- -----------------------------------------------------------------------------------------------CHHHHHHHHHHHCCCCHHHHHCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHC-CCCC-CHHHHHHHHHHCCCCHHHHCCCCCCCCC------------------CCCHH--HHHHHHHHHCCHHH----HHHHH--HHHHCC-CHHHHHHHHHHHHHHH-HHHHHHHHC-----------------------------------CCCCCHHHH-HHHHHHHCC---------------HHHHHHHHHHHHHHCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2gz4a1 ------------------------------------------------------------CCCCEEECCCCCEEECC-----------CCC--HHHCCHHHHHHHHCCCCCHHH-CCCCC----------CCCCHHHHHHHHHHHHHHHCC----------CCCHHHHHHHHCCCCCHHHHCCCCHHHHHCCC----------------------HHHHHHHHHHHHHHHHHC-CCCC--CCCHHHHHHHHHHHHHHHHHHHH-HCCCCC-----------------------------------------------HHHHHHHHCCCCCCCH-HHCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHC------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------- >P1;d2heka1 -----------CEEEEEECCCEEEEEE-HHHHHHHCCHHHHHHHHCCCCCCHHHCCC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHH---CC---------------------CCHHHHHHHHHCCCCCC------CCCC-CCHHHHCCCCC---------CCC-CHHHHHHH--HCHHHHHHHCCCC-------HHHHHHHHHHH-HCCCC--------C----HHHHHHHHHHHCC-CCHHHHHHHHHHHHHHCCC------CCCCCCHHHHHCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC--------------------CCC--CCCCHH--HHCCCHHHHHHHHHHCC---------------------CCHHHHHHHHCCCCCEEEEEEC-------------------------------------------------------------CHHHHHHHHHHHHHHCC-HHHEEEEEEEECCCCCCCEEEECCEEEEHHHHCHHHHHCC-CEEEEEEEECCCCHHHHHHCCC >P1;d2hona- CCCCHHHCEEEEEEEEEECCCEEEEEEEHHHHHHHHCHHHHHHHHCCCCCHHHHHCC-----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH----------HHCCCHHHHHHHHHHHHHCCCCC------CCCH----HHHHHHCC---------CCHHHHHHHHHHCCCCHHHHHHHHH-C-------CCHHHHHHHHH-CCCCC---------------CHHHHHHHCCC-CCHHHHHHHHHHHHHCCCH------HHCCCHHHHHCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCC--C-CHHH--HHCCCHHHHHHHHHHHCCCCC----------------HHHHHHHHHHHCCCCCEEECCCEEEEC-----------------------HHHC------CCHHHHHH-------HHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCC-CCCCCEEEECCEEEEHHHHCHHHHHCC-C--------------------C >P1;d2ibna1 ----------------------------------------------------------------------------------------------------------------------------CHHHHHHHCCCCCCHHHHHHHHHHHCCCC----------CCCCCCHHHHHHH-----CCCCCCC----CCHHHHHHHHHHHHHHHCCC----------------------------------CHHHHHHHHHCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCHH-------------------HHCCCCHHHHCCCCCCCCCCCCCCCHHH---CCCCCCCCCCCCCCCCC--CCCHHHHCCCCCCCH--HHHCCC--CCC--------------CCCCHHHHCCH-HHHHHHHHHCCCCHHH--------------------HHHHHHHHHHHHCCCCCCC---------------------------------------------------------------------------------------------------------------------- >P1;d2ousa1 --------------------------------------------------------------------------------------------CCCCHHHHHHHHHCCCCHHHH-HHHCCCCCCCHHH-------HHHHHHHHHHHHHHHHCCCCC-------CHHHHHHHHHHHHHCCC----------CCCCCCHHHHHHHHHHHHHHHHH-----------------------------HHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC-----------------------CCHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-H--HCC------------------CCCCCCHHHHHHHHHHHHHHHHCHHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-CC--CCCC-HHHCHHHH-------HHHHHHHHHHHHHCHHHHHHHHHH-HC--------------HHHH-----H----HHHHHHHHHHHHHH--------HHCCCCC------ >P1;d2para- -----------------------------------------------------------------------------------------------CCCHHHHHHHHHHCCC--CCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHCCCCCHHHHCCCCC------------------------------CCCCCC-CCHHHCCHHHHHHHH--HHHCCCCCCCCCHHHHHHHHHHH-HHHHHHHHC-----------------------------------CCHHHC-CC-CCHHHHHHCC----------------CHHHHHHC-CCCCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2pjqa1 ---------------------------------------------------------------------------------------------CCHHHHHHHHHHHHCCCCCCC-----------------CCCCHHHHHHHHHHHHHHHHHH------CC-CHHHHHHHHHHHHHHC---------------CHH----HHHHHHHCCCCCH--HHHHHHHHHHCCCCHHHHHC--------CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC------------CCCCHHHHHCHHHCCC--CCCHHHHHHHHHHHHC-CHHHHHHHHHHHCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2pq7a1 -------------------------------------------------------------------------------------------CCCCCCCCCCCCCCC-CCCCC-------------------CCCCHHHHHHC-CHHHHHHC-C------CC-CHHHHHHHHHHCCCCHHHHHHH--CCCHHHHHHH----HHHHHCCC-CCCH--HHHHHHC-CCCCCC---------------CCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC------------------------------------------------------C-CCCHHHHC-CC-HHHHHHHHHHHHHHHH------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >P1;d2qgsa1 ----------------------------------------------------------------------------------------------CCCCHHHHHHC-CCCCCCCC-----------------CCHHHHHHHHHHHHHHHHHHHC------CCCCCHHHHHHHHHCCCCC-CC-CC--CH---HHHHH----HHHHHHHCCCCCH--HHHHHHHHHHHCC---------------CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCC------------CCHHHHHHHCHHHCCCC--CCHHHHHHHHHHHHC-CHHHHHCC-CCC--CCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2r8qa- -------------------------------------------------------------------------------------------CCCCCHHHHHHHHCCCCC---CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHC-----CCCHHHHHHHHHHHHHCCC----------CCCCCCHHHHHHHHHHHHHHHHCC---------------------------CHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHHHHHC-------------------CCCHHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H--HH-------------------CCCCCCHHHHHHHHHHHHHHHHCHHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-CC--CCCC-HHHCHHHC-------CCHHHHHHHHHHHCHHHHHHHHHHHCC--------------HHHH-----H----HHHHHHHHHHHHHH--------HHHCC-------- >P1;d3b57a1 ---------------------------------------------------------------------------------------------CHHHHHHHHHHC-CCCC-----------------------CCHHHHHHHHHHHHHHHHHH------CC-CHHHHHHHHHHCCCCC-------------CHHHH----HHHHC-CCCCCCH--HHHHHHHHHHHHHC----------------CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCC-------------------------CCHHHHHHHCHHHHHHH-CCCHHHHHCCHHHHHC-CHHHHHHHHHCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d3dy8a2 ----------------------------------------------------------------------------------------CCCCCCCCHHHHHH--------------CCCCCCCHHHCC------HHHHHHHHHHHHHHCCHHHHH-----CCCHHHHHHHHHHHHHCCC----------CCCCCCHHHHHHHHHHHHHHHHHC---------------------------CHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHCC-HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-H--C--------------------CCCCCCHHHHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-CC--CCCC-HHHCCCC--------CCHHHHHHHHHHHCHHHHHHHHHH-HC--------------CCHH----HH----CHHHHHHHHHHHHH--------HHHHHHHHHCCCC >P1;d3ecma- --------------------------------------------------------------------------------------------CCCCHHHHHHCC-----------CCCCCCCCHHHHHHHCC--CCHHHHHHHHHHHHCCCHHHH-----CCCHHHHHHHHHHHHHCCCC---------CCCCCCHHHHHHHHHHHHHHHCC-------------------------H--HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCH--HHHHHH--CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCC---------------------HHHHHHHHHHHHHHHHHHHHHHHH-HC--CCCCCCCCCC-CC-------CCHHHHHHHHHHHCHHHHHHHHHH-HHC----------------C----HH----HHHHHHHHHHHHHC--------CCC---------C >P1;d3m1ta1 -------------------------------------------------------------------------------------------CCHHHHHHHHHCCCCCCHHHHHHHHHCCCC--HHHHHHHHHCCHHHHHHHHHHHCCC-----CCCCHHHHHCC-CCHHHHHHHHHHHHHCCCCC---CCCHHHHHHHHHHHHHHHHHHHHHHC------------------------------CCHHHHHHHHHHCCHHHHHHHHHCHHHHH---------HHHHHHHC----------------------------------------CCCCCCCHH---HHCCCHHHHHHHHHHHC--CCCHHHHHHHH------CCCCHH--HCC---------------CCCCCCC-CC-CHHHHHHHHHCCC-----------------------CHHHHHHHHH-CCCCCCCCC-----------------------------------CHHHHHCCCCCCCCCC------------------------------------------------------------------ >P1;d3v93a- ------------------------------------------------------------------------CCCCCCCCCCCCCCCCCCCCCCC------CCC-----------CCCCCCCCHHHHHCCCC---CHHHHHHHHHHHHCCCCC-C-----HHHHHHHHHHHHHHHHCCC----------CCCCCCHHHHHHHHHHHHHHHHHC------------------------H--HHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHC----CCHHHHHCC----------------------CCCHHHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH---------------------CCCCCCCCHHHHHHHHHHHHHHHHHCHHHCC---------------------HHHHHHHH-HHHHHHHHHHHHHHH-HC--CCCC-CCCCCCC---------CHHHHHHHHHHHCHHHHHHHHHH-HCC-------------------CCCH----HHHHHHHHHHHHHH--------HHC---------- >P1;d4qqwa1 -----------------------------------------------------------------------CCCCCCCEEECCCCCCCCEE--HHHHHHHHHHHHHH---HHHH-CCC-----------------HHHHHHHHHHCC---------------CCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC----CCCCCCCCC--CHHHHHHHHHHHCHHHH--CCCC-----------CCHHHHHHHHHHHC-CCCCCCCCC----------------CCCCCCHHHH------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH--HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC-------------------------------------------------------------------------H-----------------------HHHH------HHHHHHHH-------HHHHHHHHHC-------------------------------------------------------------------------------- >P1;d4uw2a1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC---H------HHHHHHHHHHCCCCCCCCCCCCCCCCCCC--CCHHHHHCCCC-------CCCCC--------------------------------------------------- >P1;d4w8ya1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCHHHHHCCCCCCCCCCCCCCCC--CCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCC------------------------------CCHHHHHHHHHHHHHHC--CHHHHCC------CCCCHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHCC------------------------------------------------------------------- >P1;d5bq9a1 -----------------CHHH------CHHHHHHHH-HHHHHCCCCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC--CCHH----------HHCCCHHHHHHHHC--CCCCCCC------CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCC--CCCHHHHHHHHHHCCCCCCC--------C----C--CHHHHCC-----HHHHHCCCCCC------------------------------------------HHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC-----------------------------CCCC-CCHHHHHHHHCC--------------------HHHHHHHHCCCCCCCC--------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d5dqva- ---------------------------------------------------------------------------------------------CCCCCHHHHHHHHHHHC------------------------CHHHHHHHHHHHHHHHHHH------CC-CHHHHHHHHHHCCCCC-CCCCC--CC----CCHH----HHHHHHHHCCCCH--HHHHHHHHHHCCC-----------------CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC---------------C------------CCHHHHHHHCHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >P1;d5tk8a- ------------------------------------------------------------------------------------------------CCHHHHHHHHHHCCC--CCCCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCHHHHCCCCHHHHC--------------CCCCHHHHH--HHHHHHHHHCCCCCCHHHHHHHH--HHHCCCCHHHHHHHHHHHHHHHH-HHHHHHHHH-----------------------------------CCHHHHHHHHHHHHHHHHHH--------------CCCHHHHHHHHHHCCCCCCC-------CCHHHC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d6ifka1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCHHHHHHCCCCCCHHHHHHHHCCC-CHHHHHHHHHHHCC------CCHHHHCCCCC------------------CCCHHHHHHHHHHHCC-----CCCCCHHHCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCC------CHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHCCC---CCCCHHHHCC---------------------------------------------- >P1;d6pbza3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHH---C--------CCCHHHHHHHHHHHHHHHHHHHHHH-C--CC---------------------------HHHHHHHHHHHHHHHHHHHCCC-----------------------------------------------CCHHHHHHHHHHHCCCCCCC---------HHHHHHHHHHHHCCCC--------------------CCC--HHHHCCCCCCC--------HHHHHHHHHHHHHHHHCCCCCCHHHCC-CCEEEEECCEEEEECCCCHHHHC-HHHHHHHHHHHHHHHHC-CCCEEEE---------------------------------------------------------------------------------------------------------- PSA >P1;d1so2a- ----------------------------------------------------------------------------------------------a9b9364118-----------3037020302722929b72640003003000300301921-----7025730020032007305----------b1212122000000000010000100619454ad87400706129257600100100001000000000000113010141810372----928207729----------------------58100132006200920535851500350799438204500330020004730771176036401--6----------------ab2940519569011100000000011011004---------------------681035007221602140054048-5a--3823-82135-97-------454561034304610230071037-0900035157---a-----6--4304----0261176027218---------------------- >P1;d1taza- ------------------------------------------------------------------------------------------842a27a7079207-----------5044170401601920a--730040001200531802740-----803373033006201810854--------802012110000000000-0024-------------------------0--301830650110000000000101020052710442----83910752a----------------------5920013300410071086-9612004508992375047103500310048406810860565-1--78-------------------------a0633600000000011000005---------------------181026009221404451685288-5a--28-------8-87-------442056029305700420030004-0043218a64---8606703----84----04730540165056--------519---------a >P1;d1tbfa- ---------------------------------------------------------------------------------------------7866642730283a1261a6-16046060302917------645001000100430503751-----8075610030012017304-9--------a02122020002000000000240---------------------------602930743100000000000002011031900452----a29209629----------------------5800002101520360062-9605007507884367027104400210137205722950151-1--74a------------------71619485113000100000011020004---------------------271057006431503060044148529--4a09-44115825-------941164118304710260040026-00--------------9404-----4----00330570384046--------517---------- >P1;d1u6za1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------5626801870397---2--------8059600820271005005205732-68104---------------------------8502300410030000036566-----------------------------------------------90006300700453b06506---------a211300000031025--------------------708--18a0-309507--------651020000000001100544780670780404099340103014610691-87037305503620791ba07060335a97----------------------------------------------------------------------------------------------------- >P1;d1vj7a1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------b5470950173048209-----------------------------a-------------------941720650162068108--------9363b8755112101000010084724020000000010--2631b2--6285039308-----------660220020034169------------------89648513a36201200001001404609--------------------------------6792064047500340683-------------------------9249----01640382068318--------------------- >P1;d1vqra1 --------------------------------------------------------------------------------------------b6a2570172056022077048608743562b2702a102200-0002003400268295470110650091081a4039408959939014060051829602630650161058006b33------------------------------a005101000-000000000001034694---------90484077----------------------------------------8-8360066---20823116001200850--40362002003------406506--505--------------9701300000000020121370033-----------------------700430171175083a1a07-----------------------------------a3048029604832a5------------------------------------------------------------------ >P1;d1y2ka- --------------------------------------------------------------------------------------------796784177216-----------3067100600500700a--620012003300542501840-----80367003400420064037---------a0102001000000000020061-------------------------6--008900761110000000000103021052600250----a2820862a----------------------6800013200410170186-a503004408994484056003300300049407a10660571-2--882734--b----------862050a848310100200000011010005---------------------291054009310503260035038-5a--2a13-93024-68-------163463005304820220050015-006--------------620----5a----11530570383047--------319---------- >P1;d1ynba1 ------------------------------------------------------------------------------------------8--a73681782454078141200440909----------a0110360073005003400372----a35684064024005331001042812344257------------------84a----29575136700721----98358--2------7605510300330020-310031166------------------------------------3a601510-3b19----0---------------5-2a1058328501654525-------96------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d1z1la1 -----------------------------------------------------------------------------------------------b7b7172199905619604a5043061302716------5a6001000000520501952-----9073310030012026505----------913112010000000000001320---------------------------504730741000000000000101030153710643----939008614a---------------------6810012102430260074-b502007507a95374013004600200156206712950570-0--86-------------------716-b48701710010001002200000a---------------------3-1034001110502060056138-3a---618--4003870--------50172016204820220050034-00--------------8604-----5----02620360275035--------600494419---- >P1;d1zkla- ---------------------------------------------------------------------------------------------a8986087118-----------7016080400302601a--540003003300551401961-----80667305500330075039---------80202122000000000000050-------------------------6--504900532010000000000103020142510333----938009629----------------------6700012102330091067---05004427793356018100500200048409610550451-0--67------------------950618448201100100000011010003---------------------380044005310703160043077-69--2b20-85024-67-------353070015303830330060014-0083-------------a10----65----02a2078017405a--------64----------- >P1;d2cqza- -----------------------------------------------------------------------------------------------689276334206723136045291a----------a0110360183026105500520484-b280-5273035006001000042512198428------------------75607--83147106920553----38104--103527-3300000200210120-420361366-----------------------------------829608510-801740471---------------a0073076306603745------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2gz4a1 ------------------------------------------------------------a9774350848330428-----------805--294032700035004321175-9066a----------540000000100040036317----------c030421000004101100170238663972a----------------------8b2562375022000530-a054--408a7076206601310011001-400537-----------------------------------------------99506852860ab064-9109080243830263035306503--84198688------------------------------------------------------------------------------------------------------------------------------------------c-------------------------------------------------------------------------------- >P1;d2heka1 -----------8365370500a60605-51013006060030046010100022118-----------------------------805010040000000101400530---90---------------------a3440000000020003------0003-60580034419---------874-50020002--4150271046327-------77302100200-13827--------7----7404100200354-0001200202000520909------607040870050042474300024600710140030043012401134111001100240055008--------------------847--066073--00603093024206759---------------------8148102201453104101318-------------------------------------------------------------76960482485026316-9930221404370044803020a76032035109504719-4041000001582278057507 >P1;d2hona- 986516636089463380410940203130023006060030055010020100028-----------------------------8050210400000000013005204732057628----------840052a1110000000001001------0000----7002600b---------0628700350033560602500360-6-------96109400301-46818---------------23001200331-000210020000062080a------80605185017002016700003381170015004006201440253440100200031005203503539680570707303100679--2-5053--016000a20461075029051----------------b20150052026342030039401002-----------------------6713------9aa34970-------7520a6608a4852650261166595281223638a740-669202015a8613203830b504a51-a--------------------a >P1;d2ibna1 ----------------------------------------------------------------------------------------------------------------------------b5346014502501092067138403a09----------357307004406a-----1423046----43002200400360394268----------------------------------53100000000001000031a041100013100010602930342b-------------------500670622a387126530285640057---02000002022155191--802830131110104--000424--205--------------30139907816-5053026118428298--------------------2473069006610596010---------------------------------------------------------------------------------------------------------------------- >P1;d2ousa1 --------------------------------------------------------------------------------------------56067a41580292904aa13-9503515030162-------792000001200260087a10-------64520010010044105----------a1412214100200000000024-----------------------------14a40781001000000000101021342510442----948119719-----------------------800014102420350073-b403005718a75386025104300220147505812850271-4--559------------------7052a468113300100000011010008---------------------273038217420402160033037-49--5705-44004845-------b62278119306700220030013-00--------------6404-----4----00620580163043--------135954a------ >P1;d2para- -----------------------------------------------------------------------------------------------b270773175166161--2482604----------770204400730070043004133852b0b2-81930340051130010316254b------------------------------b76911-70072058a539612--200327518c1700700300010-000160174-----------------------------------908506-32-8149307845----------------27005303-651793------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2pjqa1 ---------------------------------------------------------------------------------------------087910730352016413927-----------------2442580063028104500653------b0-6211000000010025---------------26a----405820783b049--92193024003530123266--------92905410300200310010185017113740a54a265125949328a829526866------------1000030311015038--530a205730893253-58308724775989---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2pq7a1 -------------------------------------------------------------------------------------------996286047105a40-73025-------------------86333510520-70026006-3------92-5041000000000022141584--9640042008----304a2048-b18a--9107300-006404---------------7094700300100240072176117385849------------------------------------------------------6-03163047-09-3686345467647888------a------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >P1;d2qgsa1 ----------------------------------------------------------------------------------------------a6930760452-4611561a-----------------6862342143027103500752------81a8211020000012006-17-75--56---96027----706710760a068--8238402500623---------------a490751000020042002007401730366098592612709287a40368506719------------80000400450051296--607106720563156-26427727-647--8a6------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d2r8qa- -------------------------------------------------------------------------------------------798055831750581919---a707053270401402952a63410001001500271800752-----8076600000000013205----------a11021000000000000000340---------------------------602710561000000000000002020051500430----828407808759-------------------6700005300610560071-8602002308ba438302700310031004641a711740570-1--76-------------------81659469101100100000011010015---------------------181035004223303150044048-5a--2705-66014759-------432079117302830060033009410--------------7606-----3----01620560375049--------42797-------- >P1;d3b57a1 ---------------------------------------------------------------------------------------------96a711640373-6853-----------------------76170033016203602672------82-4400010000103138-------------9a337----40372-6839067--62165015007306----------------b36310300200240010073028312760965b287065c4a-------------------------a0012204760150286-03081036207a2275-553076149836a----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d3dy8a2 ----------------------------------------------------------------------------------------a8465605791485--------------036170303616------460011002200420001731-----7065600640073037305----------b12122020000000000000220---------------------------503830731100000000000103010132600331----83a108629----------------------5810012100410170086-7603005607894477047403300200139319600740572-0--8--------------------b05394a8114101000000011010003---------------------580033006221602150054058-49--2613-6601596--------021033116304720130051017-10--------------6504----74----00520381263047--------347625665887a >P1;d3ecma- --------------------------------------------------------------------------------------------9b2565056106-----------70570705014016008--740012002400731301930-----70759204400430053047---------a0301100000000000010052-------------------------7--206400562020000000000102020233500231----73a20872a----------------------681001210051018203859801006608ab527703920330040004850550075036402--630772--5768a5991586138205468123100200000012010001---------------------291044005111402130053058-58--2622268203-88-------043372118305720580071026-008----------------0----66----02830550273059--------378---------a >P1;d3m1ta1 -------------------------------------------------------------------------------------------a79414725960490781570082037b18--785026307847901610130032b-----91971860194-a4040100000014106a0a---a262691036002004002110511a------------------------------3723301000000100401024936a318---------70586289----------------------------------------a56337048---50501101000100650--90788013004------202706--709---------------7316100-01-035017309726a-----------------------6368004811-91407082a-----------------------------------902960347706040f------------------------------------------------------------------ >P1;d3v93a- ------------------------------------------------------------------------b8a2492206b035742825918------907-----------51660401025018614---00000003100741900a-6-----a724720520000025001----------913121230000000000000050------------------------7--602540571001000000000100000143900650----702115718----------------------b71001400140015009-29602005718c9447304600530063004620871386058329---------------------7920707457012200000000011001004---------------------49006401-221603250052067-4a--2923-9b1572b---------33164126404730230040035-007-------------------6055----00500660496047--------61a---------- >P1;d4qqwa1 -----------------------------------------------------------------------690224000239808b7300--00000000000010---0065-607-----------------794177007206---------------284920030000000000000010420362b1708815----71858b691--71010022001100160--7058-----------b3700410030000-057854861----------------a3a6a72234------19060750261031005101400760810950568--1065008002301710256a00360086309705-------------------------------------------------------------------------9-----------------------9204------60062037-------2038119869-------------------------------------------------------------------------------- >P1;d4uw2a1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------7542100000001100100400541997315000400340082979630410000013788757319719b198305301610870365246a6553200006965------b401435825989384726848507453046106505420171625---4------64035105710320005057413310060--60184037167-------8772a--------------------------------------------------- >P1;d4w8ya1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------48362051001000020036a1710--6006635a205862578484ba5300213682022354957857500394689a9ba2a2150010181004605953d------------------------------67621710554026503--4058007------515258004201700050--606410162036016419------------------------------------------------------------------- >P1;d5bq9a1 -----------------2106------491054007-10155204570479255069602700572b90851642412290637501000120000001000020006002320--9575----------04806854021100--0030000------2217662051235026313c278151115303530290056006715a501770--0658830652062130032b--------3----a--5110102-----00110010128------------------------------------------5b41845174137406648a01750040015004100020036-----------------------------9537-065630060025--------------------1930153036284192--------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d5dqva- ---------------------------------------------------------------------------------------------78571176029106820------------------------7270034007204500642------a0-4400020000002005-816a9--34----1748----60383048180a7--9303401800313-----------------a26710300200220020073007302770a65a385207---------------8------------70002404550160186-0219104820682166046307714-728a05959------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >P1;d5tk8a- ------------------------------------------------------------------------------------------------361880465157050--16b2604----------671203601940361054005201944a490-7284043104110001050713357526--------------698559526--7436801870089068a527606--80061b49303300700310011-100030234-----------------------------------90870692388227606820--------------77260064015450683158-------949767--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >P1;d6ifka1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------94423010000000002023116754-61150005105704------60070027063------------------6410200330154028-----a0000660779a98753104055ba----81804a477126b3089015604880-516047843------87028103210220106--b33140006004500640371277094---c460664057---------------------------------------------- >P1;d6pbza3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------b6436701560075---2--------9053800610071015004304a40-9--07---------------------------9703500300010020043548-----------------------------------------------75105200720461906406---------8422500000020146--------------------606--3a10280a007--------571011000000002100554788520-a070708873030503a612974-76457407402620461-9040517---------------------------------------------------------------------------------------------------------- Translating the sequences ----------------------------------------------------------------------------------------------**********-----------*********************HHHHHHHHH**********-----*****HHHHHHHH******----------***********************************************************HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH*****************HHHHHHHHHHHH***C*****************--*----------------*********************************---------------------************************-**--****-*****-**-------************************-**********---*-----*--****----*************---------------------- ------------------------------------------------------------------------------------------**************-----------*****************--**HHHHHHHHH**********-----*****HHHHHHHH********--------******************-****-------------------------*--********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--**-------------------------***********************---------------------************************-**--**-------*-**-------************************-**********---*******----**----**************--------***---------* ---------------------------------------------------------------------------------------------********************-**************------**HHHHHHHHH**********-----*****HHHHHHHH******-*--------************************---------------------------********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--***------------------*****************************---------------------***************************--****-********-------************************-**--------------****-----*----**************--------***---------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------*HHHHHHHH****---*--------*************************-*****---------------------------*HHHHHHHHHHHH*********-----------------------------------------------**HHHHHHHH**********---------HHHHHHHHHH***C**--------------------***--****-******--------***************************************************-******************************----------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------****HHHHHHHHHHH**-----------------------------*-------------------*******HHHHHHHH***--------***********HHHHHHH*********************--******--**********-----------***************------------------*****************************--------------------------------*******************-------------------------****----**************--------------------- --------------------------------------------------------------------------------------------*******************************************-**HHHHHHH*********************HHHHHHH*****************************************------------------------------****HHHHH*-***HH*********H***---------********----------------------------------------*-*******---*****HHHHHHHH***C--***********------******--***--------------*************************-----------------------********************-----------------------------------****************------------------------------------------------------------------ --------------------------------------------------------------------------------------------************-----------*****************--**HHHHHHHHH**********-----*****HHHHHHHH*******---------***********************-------------------------*--********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--******--*----------*******************************---------------------************************-**--****-*****-**-------************************-***--------------***----**----**************--------***---------- ------------------------------------------------------------------------------------------*--***************************----------******HHHHHHHHH********----********HHHHHHHH*****************------------------***----**************----*****--*------*HHHHHHHHHHHH***-*****H***------------------------------------********-****----*---------------*-*HHHHHHHHHH***C***-------**------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------*********************************------**HHHHHHHHH**********-----*****HHHHHHHH******----------************************---------------------------********HHHHHHHHHHHH*********H******----**********---------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--**-------------------***-*************************---------------------*-**********************-**---***--*******--------***********************-**--------------****-----*----**************--------*********---- ---------------------------------------------------------------------------------------------***********-----------*****************--**HHHHHHHHH**********-----*****HHHHHHHH*******---------***********************-------------------------*--********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH****---**********HHHHHHHHHHHH***C***************-*--**------------------******************************---------------------************************-**--****-*****-**-------************************-****-------------***----**----**************--------**----------- -----------------------------------------------------------------------------------------------*************************----------******HHHHHHHHH***********-****-***HHHHHHHH*****************------------------*****--**************----*****--******-*HHHHHHHHHHHH***-*****H***-----------------------------------*********-HHHHHHH**---------------*HHHHHHHHHHHH***C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------*****************-----------***--*********************-*****----------******HHHHHHHHH******----------****HHHHHHH*********************----------------------******************-****--********HHHHHHHHHHHH***-******-----------------------------------------------*HHHHHHH********-*********HHHHHHHHHHHH****--********------------------------------------------------------------------------------------------------------------------------------------------*-------------------------------------------------------------------------------- -----------****************-*****************************-----------------------------************************---**---------------------**HHHHHHH********------****-**HHHH*****---------***-********--*************-------***********-*****--------*----HHHHHHHHHHH**-*******H***********------*******************************HHHHHHHH*****************HHHHHHHH**--------------------***--******--*****************---------------------**********************-------------------------------------------------------------*****************-****************************************-********************** *********************************************************-----------------------------**********************************----------******HHHHHHHHH********------****----HHHHHH**---------*************************-*-------***********-*****---------------*HHHHHHH***-*******H***********------*******************************HHHHHHHH*****************HHHHHHHHHHHH***C*****************--*-****--*********************----------------***************************-----------------------****------********-------***************************************-***************************-*--------------------* ----------------------------------------------------------------------------------------------------------------------------**************HHHHHHH********----------******HHHH***-----*******----********************----------------------------------**HHHHHHHH**HH*********H**********************-------------------*******HHH******************---****************C--***************--******--***--------------***********-****************--------------------*******************---------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------*********************-*************-------**HHHHHHHHH**********-------***HHHHHHHH******----------***********************-----------------------------*******HHHHHHHHHHHH*********H******----*********-----------------------******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--***------------------*****************************---------------------************************-**--****-********-------************************-**--------------****-----*----**************--------*******------ -----------------------------------------------------------------------------------------------****************--*******----------******HHHHHHHHH****************-***HHHHHHH**************------------------------------******-***************--************HHHHHHHH***-*****H***-----------------------------------******-**-**HHHHHH**----------------*HHHHHH*-*****C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------*********************-----------------*****HHHHHHHHH********------**-***HHHHHHHH*****---------------***----*************--********************--------******HHHHHHHHHHH*********H*******************************------------*****HHHH*HHH***--************HHH*-*HHHHHH*******---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------***************-*****-------------------*****HHHHH*-*H******-*------**-***HHHHHHHH***********--**********----********-****--*******-******---------------****HHHHHHHHHHHH*********H*****------------------------------------------------------*-********-**-HHHHHHHHHHHH****------*------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------***********-********-----------------*****HHHHHHHHH********------******HHHHHHHH*****-**-**--**---*****----*************--*************---------------*****HHHHHHHHHHHH*********H*******************************------------*****HHHH*HHH****--***********HHH*-*HHHHH**-*C*--***------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------******************---************************HHHHHHHHH**********-----*****HHHHHHHH******----------************************---------------------------********HHHHHHHHHHHH*********H******----************-------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--**-------------------*****************************---------------------************************-**--****-********-------***************************--------------****-----*----**************--------*****-------- ---------------------------------------------------------------------------------------------************-****-----------------------***HHHHHHHHH********------**-***HHHHHHHH*****-------------*****----*****-*******--**************----------------***HHHHHHHHHHHH*********H******************-------------------------*****HHHH*HHH****-************HHH*-*HHHHHH***C**----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------**************--------------************------**HHHHHHHHH**********-----*****HHHHHHHH******----------************************---------------------------********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH****-************HHHHHHHHHHHH***C***************-*--*--------------------*****************************---------------------************************-**--****-*******--------************************-**--------------****----**----**************--------************* --------------------------------------------------------------------------------------------************-----------*****************--**HHHHHHHHH**********-----*****HHHHHHHH*******---------***********************-------------------------*--********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH*****************HHHHHHHHHHHH***C*****************--******--******************************************---------------------************************-**--**********-**-------************************-***----------------*----**----**************--------***---------* -------------------------------------------------------------------------------------------******************************--*************HHHHHHHHH***-----***********-**HHHHHH************---**************************------------------------------****HHHHHHHH**HH*********H***---------********----------------------------------------*********---*H***HHHHHHHH***C--***********------******--***---------------*******-**-*************-----------------------**********-*********-----------------------------------****************------------------------------------------------------------------ ------------------------------------------------------------------------***********************------***-----------*****************---*HHHHHHHHH********-*-----*****HHHHHHHH******----------************************------------------------*--********HHHHHHHHHHHH*********H******----*********----------------------*******HHHHHHHH***-*************HHHHHHHHHHHH***C*****************---------------------*******************************---------------------********-***************-**--****-*******---------***********************-***-------------------****----**************--------***---------- -----------------------------------------------------------------------********************--**************---****-***-----------------*HHHHHHHHH**---------------***HHHHHHHH***************************----*********--*****************--****-----------**HHHHHHHHH***-*********----------------**********------*************HHHHHHHH**************--*HHHHHHHHHHHH***C*****************-------------------------------------------------------------------------*-----------------------****------********-------**********-------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------****HHHHHHH*****************HHHHHHHHHHHH***C**************************************************************------**********************************************---*------*****************************--***********-------*****--------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------****HHHHH****************--**HHH*****HHH******************************************************************------------------------------*****************--*******------******************--******************------------------------------------------------------------------- -----------------****------*********-*****************************************************************************--****----------******HHHHHHH*--*******------******HHHHHHHH****************************************--********************--------*----*--*HHHH**-----***********------------------------------------------**HHHHH**H*****************HHHHHHHH*******C-----------------------------****-************--------------------****************--------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------*****************------------------------**HHHHHHHHH********------**-***HHHHHHHH*****-*****--**----****----*************--*************-----------------***HHHHHHHHHHHH*********H***************---------------*------------*****HHHH*HHH****-************HHHHHHHHHHHH*-*C*******------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------***************--*******----------******HHHHHHHHH****************-***HHHHHHHH*****************--------------*********--***********************--********HHHHHHHHHHHH***-*****H***-----------------------------------**********HHHHHHHH**--------------***HHHHHHHHHH***C***-------******--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------***HHHHHH*****************-*HHHHHHHHHHH**------***********------------------****************-----*************************----**************************-*********------*****************--***************************---**********---------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------**HHHHHHHH****---*--------*************************-*--**---------------------------*HHHHHHHHHHHH*********-----------------------------------------------**HHHHHHHH**********---------HHHHHHHHHH***C**--------------------***--***********--------***************************-***********************-*****************-*******---------------------------------------------------------------------------------------------------------- 109604.tem _________________________________ --------------------------------------------------------------------------------------------********************************************HHHHHHHHH**********----******HHHHHHHH****************************************--**************-----*--*--********HHHHHHHHHHHH*********H******----**********---------------------*******HHHHHHHH*****************HHHHHHHHHHHH***C*****************--******--***--*-***********************************---------------------************************-**--****-********-------************************-**---------------***----**----**************--------***---------- Structural block scores 0 91 - 4.8 H 75.0 73.5 75.0 75.0 75.0 75.0 75.0 74.3 75.0 75.0 75.0 59.8 34.8 25.6 75.0 75.0 75.0 75.0 74.3 75.0 74.3 75.0 72.0 75.0 74.3 59.8 59.5 75.0 75.0 22.1 75.0 75.0 75.0 75.0 92 135 * 3.1 M 25.4 25.1 17.1 75.0 75.0 5.6 24.9 21.7 19.2 26.7 25.0 22.7 41.5 18.8 55.6 17.3 28.2 32.8 36.4 36.6 9.1 44.7 36.3 24.9 8.0 36.0 38.2 75.0 75.0 22.0 44.4 29.7 75.0 75.0 136 144 H 4.5 M 0.7 0.8 0.8 75.0 75.0 1.0 1.0 2.3 0.8 1.0 3.0 0.6 2.4 1.5 2.9 0.6 2.3 3.1 10.6 2.7 0.8 2.4 0.7 1.0 1.3 0.4 4.1 75.0 75.0 9.8 2.6 3.3 75.0 75.0 145 154 * 2.5 P 1.9 3.0 2.8 75.0 75.0 4.3 2.9 16.9 2.9 3.2 2.9 32.0 15.5 15.2 18.8 3.5 2.6 17.3 24.2 17.2 3.2 17.6 1.8 2.7 40.1 11.2 60.6 75.0 75.0 22.8 17.1 2.6 75.0 75.0 155 158 - 4.6 H 75.0 75.0 75.0 75.0 75.0 2.0 75.0 40.9 75.0 75.0 23.1 75.0 75.0 75.0 75.0 75.0 4.6 75.0 75.0 75.0 75.0 75.0 75.0 75.0 6.2 75.0 75.0 75.0 75.0 75.0 75.0 5.6 75.0 75.0 159 164 * 2.6 P 16.0 16.0 16.8 63.3 75.0 2.5 16.5 4.8 16.2 17.0 16.2 27.6 14.0 25.0 51.3 40.0 17.8 15.9 15.8 5.1 17.0 15.5 16.5 17.2 15.8 17.6 39.8 75.0 75.0 4.0 15.6 16.8 75.0 52.9 165 172 H 4.6 H 1.2 2.1 0.9 4.8 75.0 4.9 1.6 2.2 0.9 2.4 2.1 0.9 3.0 20.6 3.1 0.5 2.0 0.1 0.1 0.4 0.0 0.2 2.5 2.1 2.4 1.1 1.8 75.0 75.0 2.2 0.2 2.1 75.0 4.0 173 212 * 2.8 P 19.7 19.9 18.2 23.0 75.0 3.9 19.8 39.2 19.8 19.9 35.5 39.3 28.2 24.7 21.1 21.8 51.6 37.8 16.2 23.7 19.6 36.3 19.8 19.8 8.0 19.6 10.4 75.0 75.0 3.6 23.8 28.8 75.0 22.8 213 214 - 4.8 H 0.0 75.0 75.0 38.5 75.0 39.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 42.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 37.5 215 228 * 3.6 M 5.6 75.0 75.0 49.6 75.0 75.0 75.0 3.9 75.0 75.0 3.9 3.8 17.6 18.4 75.0 75.0 14.4 2.9 7.8 8.4 75.0 3.0 75.0 75.0 75.0 75.0 1.1 75.0 75.0 3.7 7.9 4.4 75.0 60.1 229 233 - 4.3 M 3.6 75.0 75.0 75.0 75.0 75.0 75.0 61.8 75.0 75.0 60.6 16.6 17.8 18.8 75.0 75.0 6.3 2.8 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 31.4 75.0 75.0 1.6 75.0 6.3 75.0 75.0 235 236 - 4.4 M 6.0 75.0 75.0 75.0 75.0 75.0 75.0 4.0 75.0 75.0 0.5 2.5 75.0 75.0 75.0 75.0 3.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.5 75.0 75.0 75.0 75.0 3.0 75.0 75.0 238 239 - 4.9 H 0.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 240 247 * 3.0 P 0.2 3.2 3.9 66.6 49.4 39.4 3.8 57.4 3.8 3.2 12.0 5.3 66.5 75.0 57.2 13.7 2.5 31.2 40.0 31.9 3.4 49.4 3.6 2.9 39.4 3.6 75.0 75.0 75.0 66.0 49.2 4.9 75.0 66.8 248 259 H 4.6 H 0.1 0.2 0.3 1.5 3.8 6.4 0.2 2.2 0.1 0.2 0.7 1.8 2.2 13.7 0.2 0.2 3.2 1.2 1.4 1.2 0.1 1.2 0.2 0.3 0.4 0.2 8.7 75.0 75.0 26.7 1.4 1.7 75.0 1.6 260 268 * 1.8 P 1.2 1.0 0.8 2.9 59.3 0.4 1.3 9.3 1.2 1.2 10.3 9.8 9.1 8.8 2.1 1.3 9.2 2.6 3.6 2.3 1.0 2.3 1.0 1.1 3.2 0.7 11.1 75.0 75.0 25.2 2.1 9.0 75.0 2.9 270 275 * 2.6 P 3.5 3.0 3.3 75.0 75.0 40.7 2.2 39.7 3.5 2.5 40.0 75.0 1.2 1.0 0.8 2.7 39.5 4.2 18.2 4.0 2.0 4.2 2.2 1.8 39.5 3.3 40.0 75.0 75.0 26.8 4.4 39.0 75.0 75.0 276 279 - 4.4 M 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.8 2.5 0.2 75.0 75.0 5.4 75.0 6.0 75.0 6.1 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 6.1 75.0 75.0 75.0 280 289 * 3.4 M 12.1 12.1 12.4 75.0 75.0 18.9 12.4 75.0 5.0 12.1 75.0 75.0 47.2 47.5 2.8 12.4 75.0 4.6 75.0 5.2 5.2 20.3 12.2 12.5 19.5 10.7 68.5 75.0 75.0 75.0 39.7 75.0 75.0 75.0 290 310 - 4.6 H 75.0 75.0 75.0 75.0 71.9 75.0 75.0 68.5 75.0 75.0 65.2 75.0 2.6 2.3 68.5 75.0 65.1 39.1 75.0 38.0 68.5 75.0 75.0 75.0 75.0 75.0 24.8 75.0 75.0 75.0 71.8 65.1 75.0 75.0 311 317 * 2.4 P 2.6 2.9 2.1 54.9 4.1 75.0 2.6 12.6 2.6 2.3 13.6 65.6 2.1 2.6 3.4 12.6 23.7 21.6 75.0 22.6 2.6 23.4 2.4 2.6 75.0 3.5 2.4 45.1 45.0 55.9 22.7 5.0 45.3 55.3 318 325 H 4.6 H 2.4 1.9 2.2 2.0 3.5 75.0 1.9 40.6 2.2 2.2 3.9 5.4 1.8 2.1 4.4 2.1 5.0 1.8 75.0 2.2 2.6 3.1 1.8 2.0 75.0 1.4 1.5 0.4 1.9 4.2 3.1 4.9 0.8 2.1 326 342 * 2.1 P 3.9 8.4 8.1 33.3 38.2 37.6 8.4 66.5 8.4 16.3 66.9 8.6 1.2 1.8 16.2 8.4 66.7 12.6 28.8 12.2 7.9 7.7 8.2 4.6 33.9 8.6 12.1 2.5 11.0 3.9 7.7 62.3 6.6 33.0 343 354 H 4.6 H 2.7 3.1 3.2 14.0 1.9 2.0 3.1 10.0 2.8 2.7 3.2 3.0 14.5 1.8 1.2 3.1 15.1 10.1 5.2 10.0 2.6 9.8 3.6 3.4 0.8 3.0 2.1 1.7 4.3 1.1 3.6 3.3 2.1 14.2 355 357 * 1.4 P 0.7 1.3 1.0 1.3 0.3 4.3 1.0 4.0 0.7 0.7 4.7 3.7 75.0 5.7 5.0 1.3 5.7 6.0 7.7 29.3 1.3 7.0 0.7 1.3 3.7 3.0 2.7 3.3 4.7 1.0 28.7 4.7 51.3 0.7 359 375 * 2.9 P 3.4 8.1 7.4 66.6 1.6 27.6 8.1 54.5 7.7 7.5 75.0 42.8 62.9 3.7 10.8 7.9 75.0 63.3 71.2 59.2 7.9 67.1 7.8 3.2 28.8 4.2 4.0 3.4 4.1 75.0 46.9 38.6 28.3 66.8 376 377 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 6.0 2.5 75.0 75.0 75.0 75.0 75.0 378 383 * 3.8 M 63.5 52.5 41.1 40.0 4.2 3.5 5.3 75.0 52.3 52.2 75.0 75.0 3.7 15.0 1.7 40.7 75.0 75.0 75.0 75.0 52.2 75.0 63.8 4.2 2.8 75.0 75.0 4.7 6.3 75.0 75.0 75.0 75.0 39.5 384 385 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 10.2 6.0 75.0 75.0 75.0 75.0 75.0 386 388 * 3.9 M 75.0 75.0 75.0 6.5 5.3 3.3 53.8 75.0 75.0 75.0 75.0 75.0 2.0 2.3 2.3 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 6.0 5.3 75.0 75.0 6.0 1.7 53.0 75.0 75.0 75.0 4.8 389 390 - 4.2 M 75.0 75.0 75.0 37.5 2.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 1.5 0.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 9.2 75.0 75.0 75.0 1.5 6.0 4.0 75.0 75.0 75.0 1.0 393 427 * 3.3 M 6.7 26.7 14.4 19.0 37.9 22.6 10.5 75.0 17.0 12.3 75.0 75.0 46.7 36.0 26.2 14.6 75.0 75.0 75.0 75.0 14.6 75.0 14.7 2.3 29.9 10.3 75.0 16.2 18.9 44.2 75.0 75.0 14.0 19.0 428 448 - 4.4 M 75.0 75.0 75.0 3.1 45.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 12.5 2.1 65.2 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 5.1 75.0 30.7 75.0 75.0 18.2 7.2 449 472 * 3.1 M 2.9 3.6 3.0 7.0 14.1 15.7 2.9 75.0 5.2 2.8 75.0 75.0 75.0 72.0 18.3 2.8 75.0 75.0 75.0 75.0 2.5 75.0 2.8 2.5 18.9 5.8 72.2 3.3 15.4 75.0 75.0 75.0 7.1 7.4 474 475 * 3.5 M 7.8 7.8 5.5 11.0 75.0 75.0 7.8 75.0 6.8 7.5 75.0 75.0 75.0 4.0 75.0 6.5 75.0 75.0 75.0 75.0 7.8 75.0 6.5 6.5 75.0 7.2 1.0 75.0 0.0 75.0 75.0 75.0 6.0 42.0 476 477 - 4.7 H 75.0 75.0 75.0 3.5 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 39.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 39.5 39.5 41.0 75.0 75.0 75.0 39.0 2.0 478 481 * 3.9 M 4.0 40.0 5.9 2.2 75.0 75.0 4.1 75.0 22.5 3.9 75.0 75.0 75.0 75.0 75.0 4.2 75.0 75.0 75.0 75.0 3.5 75.0 3.0 3.0 75.0 4.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 3.2 483 490 * 3.6 M 13.8 49.8 3.8 41.4 75.0 75.0 13.4 75.0 12.1 13.4 75.0 75.0 75.0 6.6 75.0 3.6 75.0 75.0 75.0 75.0 4.8 75.0 13.5 13.8 75.0 15.2 3.0 3.0 3.2 75.0 75.0 75.0 3.6 75.0 491 497 - 4.8 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 1.9 2.0 75.0 75.0 75.0 1.1 75.0 498 521 * 3.3 M 2.9 2.5 2.9 75.0 18.7 28.1 2.5 75.0 5.4 2.4 75.0 72.4 31.0 4.7 75.0 3.1 75.0 75.0 75.0 75.0 3.0 75.0 2.1 3.1 28.3 5.7 45.7 8.9 11.9 75.0 75.0 75.0 8.9 75.0 523 524 * 3.7 M 4.5 0.0 0.0 75.0 75.0 75.0 0.0 75.0 0.0 0.0 75.0 75.0 40.5 3.5 75.0 0.0 75.0 75.0 75.0 75.0 0.5 75.0 0.5 0.0 75.0 0.0 75.0 6.5 75.0 75.0 75.0 75.0 4.5 75.0 525 539 - 4.6 H 32.1 18.9 70.6 75.0 75.0 75.0 70.4 75.0 70.5 65.7 75.0 75.0 3.2 9.4 75.0 70.4 75.0 75.0 75.0 75.0 70.5 75.0 70.4 70.5 75.0 70.5 75.0 52.3 75.0 75.0 75.0 75.0 18.9 75.0 540 542 * 4.0 M 52.0 3.3 2.7 75.0 75.0 75.0 2.7 75.0 3.3 3.8 75.0 75.0 4.0 3.7 75.0 2.7 75.0 75.0 75.0 75.0 4.0 75.0 3.0 50.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 29.0 75.0 543 546 - 4.8 H 39.2 75.0 75.0 75.0 40.2 75.0 75.0 75.0 75.0 75.0 75.0 75.0 1.2 2.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 39.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 547 548 * 3.9 M 2.0 6.0 39.5 75.0 6.5 75.0 7.8 75.0 40.0 5.5 75.0 75.0 8.8 9.2 75.0 39.5 75.0 75.0 75.0 75.0 39.0 75.0 5.5 6.0 75.0 5.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 549 552 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 2.8 3.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 553 566 * 3.7 M 8.4 3.3 3.1 75.0 3.6 75.0 3.4 75.0 2.9 4.1 75.0 75.0 8.8 9.8 75.0 2.7 75.0 75.0 75.0 75.0 3.4 75.0 2.9 3.5 75.0 3.4 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 567 574 - 4.9 H 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 0.6 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 75.0 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