Database

Table 3: Comparison of the number of domains (agreement score) identified by DIAL4 against those of SCOP, 3Dee, CATH, DALI, Crystallographers' and Protein Domain Parser for the 55 protein dataset (Jones et al., 1998).

Database	DIAL4		SCOP		3Dee		CATH		Crystallographers'		DALI		Protein Domain Parser
Database	*No	%$	*No	%$	*No	%$	*No	%$	*No	%$	*No	%$	*No	%$
DIAL4	55	100	46	83.66	49	89.09	50	94.34	52	94.55	42	77.78	49	89.09
SCOP	46	83.66	55	100	42	76.36	43	81.13	42	76.36	39	72.22	45	81.82
3Dee	49	89.09	42	76.36	55	100	51	96.23	51	92.73	39	72.22	45	81.82
CATH	50	94.34	43	81.13	51	96.23	53	100	50	94.34	41	77.36	47	88.68
CRYST	52	94.55	42	76.36	51	92.73	49	94.34	55	100	39	75	45	81.82
DALI	42	77.78	39	72.22	39	72.22	41	77.36	39	75	54	100	43	79.63
PDP	49	89.09	45	81.82	45	81.82	47	88.68	45	81.82	43	79.63	55	100

*No - Number protein chain common between the two resources

%$ - Agreement score (refer to the manuscript)