Secondary structure calculation program - copyright by David Keith Smith, 1989
2dnjA.pdb
2DNJ ENDONUCLEASE DEOXYRIBONUCLEASE I (DNASE I) (E.C.3.1.21.1) COMPL BOVINE (BOS TAURUS) PANCREAS
Sequence length - 253
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 1 LEU L e 0 0 999.9 136.4 -178.4 999.9 999.9 999.9 0 0.0 252 -3.1 0 0.0 0 0.0 10 45
2 A 2 LYS K E E AA - 251 0 -114.6 121.3 -177.8 -177.4 999.9 157.8 0 0.0 33 -2.7 0 0.0 34 -1.8 11 53
3 A 3 ILE I E E AAb + 250 34 -119.3 139.3 179.4 176.5 4.0 165.9 250 -2.7 250 -2.3 0 0.0 0 0.0 12 71
4 A 4 ALA A E E AAb - 249 35 -143.0 157.3 176.7 -148.0 23.9 165.0 34 -2.1 36 -2.9 0 0.0 0 0.0 12 63
5 A 5 ALA A E E AAb - 248 36 -124.7 125.9 -177.5 -175.5 24.4 176.6 248 -2.4 248 -2.2 0 0.0 0 0.0 15 74
6 A 6 PHE F E E A b - 0 37 -135.6 118.6 174.7 -157.8 21.5 168.4 36 -3.7 38 -2.4 0 0.0 8 -0.8 14 72
7 A 7 ASN N E E A b - 0 38 -86.9 112.8 177.3 -166.7 16.2 149.1 0 0.0 9 -0.8 0 0.0 0 0.0 14 64
8 A 8 ILE I E E A *> T - 0 0 -104.6 105.0 -177.3 -113.7 32.0 159.8 38 -1.8 11 -1.3 6 -0.8 0 0.0 13 65
9 A 9 ARG R E E A *3 TS- 0 0 -43.9 119.6 179.9 -18.5 87.3 101.1 7 -0.8 0 0.0 0 0.0 0 0.0 10 51
10 A 10 THR T E E A *3 TS- 0 0 42.7 60.8 178.9 -157.1 79.6 25.5 0 0.0 0 0.0 0 0.0 0 0.0 7 43
11 A 11 PHE F E E A b< T + 0 40 -65.4 122.4 -177.9 117.8 42.3 124.7 39 -1.8 41 -3.5 8 -1.3 0 0.0 13 58
12 A 12 GLY G S h > TS- 0 0 -167.8 -172.0 -177.5 -60.5 77.4 154.7 0 0.0 16 -2.4 0 0.0 0 0.0 12 42
13 A 13 GLU E H H > TS+ 0 0 -57.6 -41.5 179.6 56.2 122.3 30.4 0 0.0 17 -1.3 0 0.0 0 0.0 9 34
14 A 14 THR T H H 4 TS+ 0 0 -58.4 -51.8 179.2 40.0 112.3 20.1 0 0.0 0 0.0 0 0.0 0 0.0 6 32
15 A 15 LYS K H H 4 > TS+ 0 0 -65.3 -42.2 -179.8 50.5 116.2 21.8 0 0.0 18 -1.4 0 0.0 0 0.0 9 40
16 A 16 MET M H H < 3 TS+ 0 0 -71.4 -17.7 177.3 58.2 105.3 46.5 12 -2.4 0 0.0 0 0.0 0 0.0 13 42
17 A 17 SER S T h < 3 TS+ 0 0 -87.2 -11.6 176.8 87.0 85.7 58.4 13 -1.3 19 -0.7 0 0.0 0 0.0 8 30
18 A 18 ASN N h > < T - 0 0 -91.4 116.2 -177.5 -155.3 69.9 152.3 15 -1.4 22 -3.1 0 0.0 0 0.0 8 26
19 A 19 ALA A H H > TS+ 0 0 -63.9 -34.5 177.4 51.1 91.7 38.0 17 -0.7 23 -2.0 0 0.0 0 0.0 7 25
20 A 20 THR T H H > TS+ 0 0 -66.6 -48.5 178.8 43.7 114.4 19.2 0 0.0 24 -1.4 0 0.0 0 0.0 6 28
21 A 21 LEU L H H > TS+ 0 0 -60.5 -49.7 177.8 52.8 112.3 20.7 0 0.0 25 -2.2 0 0.0 0 0.0 11 39
22 A 22 ALA A H H X TS+ 0 0 -53.1 -47.8 179.6 55.4 105.4 26.9 18 -3.1 26 -3.0 0 0.0 0 0.0 12 41
23 A 23 SER S H H X TS+ 0 0 -56.2 -43.5 177.2 46.7 108.5 31.8 19 -2.0 27 -2.1 0 0.0 0 0.0 8 36
24 A 24 TYR Y H H X TS+ 0 0 -68.8 -37.4 177.2 50.2 112.1 28.2 20 -1.4 28 -2.3 0 0.0 0 0.0 9 47
25 A 25 ILE I H H X TS+ 0 0 -64.1 -46.1 179.0 49.0 111.6 20.8 21 -2.2 29 -3.0 0 0.0 0 0.0 9 63
26 A 26 VAL V H H X TS+ 0 0 -58.7 -45.4 178.8 51.5 109.9 25.1 22 -3.0 30 -2.4 0 0.0 0 0.0 11 49
27 A 27 ARG R H H X TS+ 0 0 -57.0 -49.6 177.0 45.0 112.9 21.6 23 -2.1 31 -0.5 0 0.0 0 0.0 8 44
28 A 28 ILE I H H < > TS+ 0 0 -59.2 -53.4 -179.6 50.9 112.5 13.4 24 -2.3 31 -1.7 0 0.0 0 0.0 9 51
29 A 29 VAL V H H < > TS+ 0 0 -55.2 -41.6 179.5 62.9 101.1 30.0 25 -3.0 32 -1.9 0 0.0 0 0.0 8 58
30 A 30 ARG R H H < 3 TS+ 0 0 -62.5 -15.0 176.3 70.9 88.2 51.5 26 -2.4 0 0.0 0 0.0 0 0.0 8 46
31 A 31 ARG R T h < < TS+ 0 0 -69.5 -26.1 -171.1 69.8 95.8 45.6 28 -1.7 0 0.0 27 -0.5 0 0.0 7 42
32 A 32 TYR Y t < T - 0 0 -109.7 155.6 178.8 -158.8 57.8 137.1 29 -1.9 0 0.0 0 0.0 0 0.0 12 48
33 A 33 ASP D S e S+ 0 0 -87.6 -37.4 178.2 19.5 98.0 39.9 2 -2.7 85 -2.0 0 0.0 0 0.0 13 50
34 A 34 ILE I E E AbC S+ 3 84 -136.6 128.9 176.7 178.4 72.8 169.6 2 -1.8 4 -2.1 0 0.0 0 0.0 11 66
35 A 35 VAL V E E AbC - 4 83 -139.9 123.4 174.5 -152.4 18.3 163.6 83 -3.0 83 -2.5 0 0.0 37 -0.6 13 74
36 A 36 LEU L E E AbC - 5 82 -89.0 123.1 175.8 -163.5 16.0 145.3 4 -2.9 6 -3.7 0 0.0 0 0.0 13 71
37 A 37 ILE I E E AbC - 6 81 -111.2 125.5 -179.1 -168.2 8.5 159.7 81 -3.0 81 -2.6 35 -0.6 0 0.0 13 79
38 A 38 GLN Q E E Ab* + 7 0 -112.5 163.8 -179.9 44.2 59.1 136.7 6 -2.4 8 -1.8 0 0.0 0 0.0 16 71
39 A 39 GLU E E E A** + 0 0 70.7 33.9 178.1 168.6 64.7 36.2 0 0.0 11 -1.8 0 0.0 41 -0.8 13 61
40 A 40 VAL V E E AbC + 11 79 -79.5 108.3 -179.7 179.9 10.4 137.1 79 -1.4 79 -2.4 0 0.0 42 -0.7 13 57
41 A 41 ARG R e + 0 0 -114.3 80.6 -172.1 122.8 36.7 146.8 11 -3.5 0 0.0 39 -0.8 0 0.0 11 42
42 A 42 ASP D t > T + 0 0 -150.3 81.5 -176.8 179.2 33.6 130.9 40 -0.7 45 -1.2 0 0.0 0 0.0 13 38
43 A 43 SER S T T 3 TS+ 0 0 -60.8 -34.9 179.4 36.4 88.1 34.4 0 0.0 0 0.0 0 0.0 0 0.0 5 31
44 A 44 HIS H T T 3 TS- 0 0 -100.3 1.9 176.0 -120.7 106.9 73.3 0 0.0 0 0.0 0 0.0 0 0.0 4 26
45 A 45 LEU L S h > < TS+ 0 0 65.0 31.1 179.3 132.8 70.3 43.3 42 -1.2 49 -1.6 0 0.0 0 0.0 7 37
46 A 46 VAL V H H > TS+ 0 0 -77.7 -40.0 179.9 46.4 73.7 29.7 0 0.0 50 -1.9 0 0.0 0 0.0 9 29
47 A 47 ALA A H H > TS+ 0 0 -69.7 -43.1 177.3 49.9 112.9 22.1 0 0.0 51 -2.0 0 0.0 0 0.0 12 44
48 A 48 VAL V H H > TS+ 0 0 -60.9 -39.4 179.4 52.6 109.7 30.5 0 0.0 52 -2.0 0 0.0 0 0.0 9 50
49 A 49 GLY G H H X TS+ 0 0 -61.9 -47.8 178.9 48.5 109.2 23.9 45 -1.6 53 -2.2 0 0.0 0 0.0 8 40
50 A 50 LYS K H H X TS+ 0 0 -59.7 -41.0 -179.7 51.8 110.6 32.8 46 -1.9 54 -1.7 0 0.0 0 0.0 9 40
51 A 51 LEU L H H X TS+ 0 0 -64.6 -46.3 -179.7 46.9 110.3 24.5 47 -2.0 55 -2.3 0 0.0 0 0.0 11 57
52 A 52 LEU L H H X TS+ 0 0 -64.9 -39.8 178.0 57.6 107.8 29.1 48 -2.0 56 -2.1 0 0.0 0 0.0 10 48
53 A 53 ASP D H H < TS+ 0 0 -56.0 -46.7 177.6 44.7 109.5 23.6 49 -2.2 0 0.0 0 0.0 0 0.0 8 32
54 A 54 TYR Y H H < > TS+ 0 0 -62.0 -49.4 -175.8 47.1 115.7 20.8 50 -1.7 57 -1.2 0 0.0 0 0.0 8 37
55 A 55 LEU L H H < 3 TS+ 0 0 -65.0 -29.2 -174.6 44.3 116.6 46.8 51 -2.3 0 0.0 0 0.0 0 0.0 10 39
56 A 56 ASN N T h < 3 TS+ 0 0 -107.8 25.9 179.4 115.1 75.0 88.3 52 -2.1 0 0.0 0 0.0 0 0.0 11 30
57 A 57 GLN Q S t < TS+ 0 0 -64.7 -32.5 -177.4 28.5 87.6 37.9 54 -1.2 0 0.0 0 0.0 0 0.0 7 22
58 A 58 ASP D S S S+ 0 0 -100.7 -30.7 178.7 22.0 134.3 50.5 0 0.0 0 0.0 0 0.0 0 0.0 5 16
59 A 59 ASP D S t > TS- 0 0 -139.0 127.9 -179.8 -141.4 71.0 163.3 0 0.0 62 -1.4 0 0.0 0 0.0 6 18
60 A 60 PRO P T T 3 TS+ 0 0 -64.7 -21.1 179.9 45.7 101.7 53.7 0 0.0 0 0.0 0 0.0 0 0.0 7 21
61 A 61 ASN N T T 3 TS+ 0 0 -113.5 32.1 178.2 116.2 71.7 93.5 0 0.0 0 0.0 0 0.0 0 0.0 8 27
62 A 62 THR T S t < TS+ 0 0 -63.4 -51.6 177.3 11.7 90.3 19.2 59 -1.4 0 0.0 0 0.0 0 0.0 10 33
63 A 63 TYR Y - 0 0 -128.5 147.1 174.0 -175.1 66.0 166.1 0 0.0 0 0.0 0 0.0 0 0.0 12 44
64 A 64 HIS H E E AD - 84 0 -123.6 175.9 179.8 -153.5 16.6 134.8 84 -3.1 84 -2.1 0 0.0 0 0.0 10 43
65 A 65 TYR Y E E AD - 83 0 -154.9 165.0 175.9 -151.9 21.1 170.0 0 0.0 0 0.0 0 0.0 0 0.0 8 54
66 A 66 VAL V E E AD - 82 0 -134.0 133.6 179.7 -168.8 24.1 164.8 82 -1.8 82 -3.1 0 0.0 0 0.0 7 46
67 A 67 VAL V E E AD - 81 0 -131.9 138.3 178.0 -141.8 12.2 172.8 0 0.0 0 0.0 0 0.0 0 0.0 8 53
68 A 68 SER S e - 0 0 -82.7 175.3 173.3 -94.6 35.2 109.4 80 -2.4 0 0.0 0 0.0 0 0.0 10 46
69 A 69 GLU E - 0 0 -82.9 166.0 177.7 -73.3 59.1 115.3 0 0.0 0 0.0 0 0.0 0 0.0 6 42
70 A 70 PRO P - 0 0 -63.4 121.5 -177.1 -155.8 60.5 121.0 0 0.0 0 0.0 0 0.0 0 0.0 9 43
71 A 71 LEU L B B A + 78 0 -111.8 138.3 179.1 100.2 36.0 154.5 78 -2.6 78 -1.8 0 0.0 0 0.0 11 42
72 A 72 GLY G - 0 0 155.7 145.1 178.5 -115.6 64.3 126.9 0 0.0 0 0.0 0 0.0 0 0.0 10 38
73 A 73 ARG R S S S+ 0 0 -62.3 -39.2 -178.2 14.7 98.9 36.6 0 0.0 0 0.0 0 0.0 0 0.0 8 24
74 A 74 ASN N S S S- 0 0 -116.6 -144.9 -177.1 -51.9 115.0 99.8 0 0.0 0 0.0 0 0.0 0 0.0 5 17
75 A 75 SER S S S S+ 0 0 -74.4 -22.6 178.6 86.8 108.2 51.9 0 0.0 77 -0.7 0 0.0 0 0.0 5 17
76 A 76 TYR Y + 0 0 -85.3 111.1 -177.4 168.6 61.7 139.0 0 0.0 0 0.0 0 0.0 0 0.0 6 29
77 A 77 LYS K - 0 0 -128.7 150.4 178.4 -174.9 17.7 165.4 75 -0.7 0 0.0 0 0.0 0 0.0 10 36
78 A 78 GLU E B B A - 71 0 -140.0 145.9 173.5 -141.8 14.7 169.0 71 -1.8 71 -2.6 0 0.0 0 0.0 13 49
79 A 79 ARG R E E AC - 40 0 -105.0 158.7 172.2 -130.4 14.5 139.4 40 -2.4 40 -1.4 0 0.0 0 0.0 14 61
80 A 80 TYR Y E E A* - 0 0 -102.2 130.1 179.4 -164.9 27.4 156.4 0 0.0 68 -2.4 0 0.0 0 0.0 14 63
81 A 81 LEU L E E ACD - 37 67 -122.7 126.8 176.6 -163.1 7.9 174.4 37 -2.6 37 -3.0 0 0.0 83 -0.5 12 70
82 A 82 PHE F E E ACD - 36 66 -109.3 122.8 176.3 -166.8 5.1 160.5 66 -3.1 66 -1.8 0 0.0 0 0.0 11 70
83 A 83 LEU L E E ACD + 35 65 -105.4 134.6 179.2 171.8 16.0 153.6 35 -2.5 35 -3.0 81 -0.5 0 0.0 13 67
84 A 84 PHE F E E ACD - 34 64 -146.3 151.7 178.8 -119.4 37.9 170.0 64 -2.1 64 -3.1 0 0.0 0 0.0 13 54
85 A 85 ARG R e > > T - 0 0 -92.5 111.4 -176.1 -152.0 23.8 145.9 33 -2.0 89 -1.8 0 0.0 88 -1.8 12 44
86 A 86 PRO P T T 4 3 TS+ 0 0 -63.3 -20.1 175.6 60.0 91.8 47.5 0 0.0 0 0.0 0 0.0 0 0.0 10 35
87 A 87 ASN N T T 4 3 TS+ 0 0 -78.6 -19.6 -179.3 40.5 112.6 50.3 0 0.0 0 0.0 0 0.0 0 0.0 5 29
88 A 88 LYS K T e 4 < TS+ 0 0 -97.4 -41.8 -178.1 2.8 126.7 39.4 85 -1.8 114 -0.7 0 0.0 115 -0.6 11 39
89 A 89 VAL V E E T + 89 0 -136.6 108.9 -178.5 179.9 14.4 156.8 119 -2.9 116 -0.6 0 0.0 0 0.0 11 40
114 A 121 HIS H T e 3 TS+ 0 0 -72.4 -41.4 -176.7 55.7 78.7 27.9 88 -0.7 0 0.0 0 0.0 0 0.0 7 29
115 A 122 SER S T T 3 TS+ 0 0 -79.5 6.1 -176.7 64.9 99.3 74.8 88 -0.6 0 0.0 0 0.0 0 0.0 8 29
116 A 123 THR T S t < TS- 0 0 -130.1 166.8 177.9 -108.1 85.1 152.1 113 -0.6 0 0.0 0 0.0 0 0.0 10 32
117 A 124 LYS K S S S+ 0 0 -53.5 -53.5 175.9 60.9 109.7 26.4 253 -1.7 0 0.0 0 0.0 0 0.0 9 28
118 A 125 VAL V - 0 0 -77.0 134.6 -179.6 -175.0 67.7 137.8 0 0.0 0 0.0 0 0.0 0 0.0 10 38
119 A 126 LYS K e + 0 0 -102.7 -25.5 179.4 30.6 68.4 51.6 0 0.0 113 -2.9 0 0.0 0 0.0 9 36
120 A 127 GLU E E E BF + 112 0 -142.2 132.4 -178.9 148.4 69.3 175.6 0 0.0 0 0.0 0 0.0 0 0.0 9 46
121 A 128 PHE F E E BF - 111 0 -159.2 157.1 177.7 -129.4 31.9 171.5 111 -2.1 111 -3.2 0 0.0 0 0.0 14 57
122 A 129 ALA A E E BFg - 110 156 -111.1 152.4 175.3 -152.0 10.2 139.0 155 -2.1 157 -2.5 0 0.0 0 0.0 12 64
123 A 130 ILE I E E BFg - 109 157 -122.9 127.0 176.7 -158.8 6.6 177.6 109 -2.1 109 -2.3 0 0.0 0 0.0 12 78
124 A 131 VAL V E E BFg - 108 158 -107.5 125.1 -179.6 -152.7 12.8 160.9 157 -2.8 159 -3.0 0 0.0 0 0.0 12 76
125 A 132 ALA A E E BFg + 107 159 -102.2 138.5 173.9 173.7 17.3 147.3 107 -2.6 107 -0.6 0 0.0 0 0.0 12 74
126 A 133 LEU L e - 0 0 -148.7 123.9 170.8 -180.0 22.4 158.1 159 -1.8 128 -0.7 0 0.0 0 0.0 13 75
127 A 134 HIS H - 0 0 -112.6 92.8 -175.2 -151.2 38.1 165.1 0 0.0 0 0.0 0 0.0 0 0.0 12 76
128 A 135 SER S - 0 0 -70.0 162.7 177.1 -101.5 18.7 100.8 161 -1.8 0 0.0 126 -0.7 0 0.0 14 60
129 A 136 ALA A g > T - 0 0 -82.0 124.5 180.0 -136.8 28.3 144.1 0 0.0 132 -2.1 0 0.0 0 0.0 12 45
130 A 137 PRO P G G > TS+ 0 0 -47.9 -46.1 178.2 52.2 102.9 28.5 0 0.0 133 -1.1 0 0.0 0 0.0 8 37
131 A 138 SER S G G 3 TS+ 0 0 -63.7 -23.2 -176.1 34.1 117.8 53.5 0 0.0 0 0.0 0 0.0 0 0.0 5 29
132 A 139 ASP D G h > < TS+ 0 0 -131.0 34.6 -176.5 131.1 77.8 95.4 129 -2.1 136 -2.4 0 0.0 0 0.0 9 37
133 A 140 ALA A H H > < T + 0 0 -57.8 -49.3 -178.7 50.4 69.1 30.8 130 -1.1 137 -2.4 0 0.0 0 0.0 14 49
134 A 141 VAL V H H > TS+ 0 0 -57.7 -50.8 -178.2 43.6 113.4 22.4 0 0.0 138 -2.4 0 0.0 0 0.0 12 44
135 A 142 ALA A H H > TS+ 0 0 -63.7 -43.8 -179.7 49.8 115.2 24.7 0 0.0 139 -2.3 0 0.0 0 0.0 9 42
136 A 143 GLU E H H X TS+ 0 0 -65.3 -42.8 178.8 46.4 111.2 24.0 132 -2.4 140 -1.5 0 0.0 0 0.0 12 52
137 A 144 ILE I H H < TS+ 0 0 -63.6 -42.9 176.3 50.4 114.1 19.0 133 -2.4 0 0.0 0 0.0 0 0.0 12 59
138 A 145 ASN N H H < > TS+ 0 0 -61.2 -38.1 178.5 56.5 106.1 28.9 134 -2.4 141 -1.2 0 0.0 0 0.0 12 52
139 A 146 SER S H H X > TS+ 0 0 -66.5 -27.1 175.6 72.9 90.3 38.8 135 -2.3 143 -1.4 0 0.0 142 -1.1 9 48
140 A 147 LEU L H H X 3 TS+ 0 0 -56.7 -28.3 175.1 66.2 85.6 42.7 136 -1.5 144 -2.3 0 0.0 0 0.0 9 63
141 A 148 TYR Y H H > < TS+ 0 0 -58.0 -45.5 178.2 46.8 102.4 24.0 138 -1.2 145 -1.6 0 0.0 0 0.0 10 54
142 A 149 ASP D H H > < TS+ 0 0 -66.2 -37.3 176.6 54.2 109.2 32.7 139 -1.1 146 -2.3 0 0.0 0 0.0 8 44
143 A 150 VAL V H H X TS+ 0 0 -61.8 -44.8 176.6 53.3 106.0 22.9 139 -1.4 147 -3.0 0 0.0 0 0.0 9 56
144 A 151 TYR Y H H X TS+ 0 0 -54.4 -49.5 178.9 47.5 109.6 23.6 140 -2.3 148 -2.6 0 0.0 0 0.0 9 55
145 A 152 LEU L H H X TS+ 0 0 -59.2 -42.8 177.7 52.0 112.0 24.6 141 -1.6 149 -2.3 0 0.0 0 0.0 8 37
146 A 153 ASP D H H X TS+ 0 0 -55.3 -58.0 179.6 44.6 111.1 18.1 142 -2.3 150 -3.0 0 0.0 0 0.0 8 39
147 A 154 VAL V H H X TS+ 0 0 -55.2 -47.5 177.1 56.2 110.7 27.1 143 -3.0 151 -2.8 0 0.0 153 -0.5 10 43
148 A 155 GLN Q H H X TS+ 0 0 -52.7 -49.5 178.4 38.7 113.8 24.5 144 -2.6 152 -1.3 0 0.0 0 0.0 10 37
149 A 156 GLN Q H H < TS+ 0 0 -69.6 -44.1 -178.0 53.3 115.2 28.6 145 -2.3 0 0.0 0 0.0 0 0.0 8 22
150 A 157 LYS K H H < TS+ 0 0 -56.4 -57.5 -176.1 14.1 129.2 18.1 146 -3.0 0 0.0 0 0.0 0 0.0 6 29
151 A 158 TRP W H H < TS- 0 0 -104.6 2.2 -177.4 -122.0 93.3 73.6 147 -2.8 0 0.0 0 0.0 0 0.0 6 31
152 A 159 HIS H h < T + 0 0 56.7 38.5 -177.4 139.5 67.9 31.3 148 -1.3 0 0.0 0 0.0 0 0.0 7 27
153 A 160 LEU L + 0 0 -119.6 128.4 177.5 177.7 36.7 159.6 147 -0.5 0 0.0 0 0.0 0 0.0 10 39
154 A 161 ASN N + 0 0 -97.4 -20.7 -175.7 92.9 62.4 52.3 0 0.0 156 -1.1 0 0.0 0 0.0 9 42
155 A 162 ASP D e + 0 0 -84.8 92.8 -174.2 153.3 56.0 133.9 0 0.0 122 -2.1 0 0.0 0 0.0 14 48
156 A 163 VAL V E E BgH - 122 210 -132.3 131.1 177.7 -158.4 33.6 174.9 210 -1.5 210 -2.9 154 -1.1 158 -0.5 14 63
157 A 164 MET M E E BgH - 123 209 -108.4 121.5 177.8 -160.1 10.1 161.4 122 -2.5 124 -2.8 0 0.0 159 -0.5 12 74
158 A 165 LEU L E E BgH + 124 208 -106.3 125.9 -173.1 163.8 26.8 162.9 208 -4.2 208 -3.2 156 -0.5 0 0.0 11 76
159 A 166 MET M E E BgH + 125 207 -149.7 156.3 176.4 70.9 8.3 170.9 124 -3.0 126 -1.8 157 -0.5 0 0.0 14 76
160 A 167 GLY G E E B H S- 0 206 141.3 -170.0 177.4 -34.1 81.6 154.5 206 -1.7 206 -2.6 0 0.0 162 -1.2 15 75
161 A 168 ASP D E E B H + 0 205 -88.9 94.0 -179.1 169.2 53.4 140.7 0 0.0 128 -1.8 0 0.0 0 0.0 14 76
162 A 169 PHE F e - 0 0 -85.8 -10.5 -174.0 -128.6 44.7 64.8 204 -1.4 0 0.0 160 -1.2 0 0.0 15 71
163 A 170 ASN N + 0 0 59.3 33.1 -169.2 166.2 51.0 35.2 0 0.0 165 -1.5 0 0.0 0 0.0 14 65
164 A 171 ALA A + 0 0 -83.3 44.9 179.4 33.9 41.1 104.2 204 -1.4 0 0.0 0 0.0 0 0.0 14 59
165 A 172 ASP D S t > > TS+ 0 0 -171.8 -177.5 175.4 29.7 89.6 163.1 163 -1.5 168 -1.4 0 0.0 169 -0.9 11 47
166 A 173 CYS C T T 4 3 TS- 0 0 49.9 -128.8 -177.3 -8.6 121.7 99.1 0 0.0 0 0.0 0 0.0 0 0.0 8 34
167 A 174 SER S T T 4 3 TS+ 0 0 -73.5 -18.2 -177.1 56.7 133.8 42.9 0 0.0 0 0.0 0 0.0 0 0.0 5 27
168 A 175 TYR Y T T 4 < TS+ 0 0 -80.6 -37.5 177.2 22.2 119.1 35.1 165 -1.4 0 0.0 0 0.0 0 0.0 12 35
169 A 176 VAL V S t < TS- 0 0 -132.9 105.2 179.7 -164.7 81.1 154.9 165 -0.9 0 0.0 0 0.0 0 0.0 12 39
170 A 177 THR T g > > T - 0 0 -89.2 166.7 -177.3 -102.0 34.4 117.1 0 0.0 173 -2.0 0 0.0 174 -0.8 9 30
171 A 178 SER S G G 4 > TS+ 0 0 -55.1 -41.1 178.6 54.8 119.1 31.6 0 0.0 174 -0.7 0 0.0 0 0.0 5 24
172 A 179 SER S G G 4 3 TS+ 0 0 -72.8 -9.3 179.2 59.5 102.1 56.4 0 0.0 0 0.0 0 0.0 0 0.0 5 21
173 A 180 GLN Q G G 4 X TS+ 0 0 -91.8 -21.7 -179.1 83.9 80.7 50.3 170 -2.0 176 -1.8 0 0.0 0 0.0 9 29
174 A 181 TRP W G G < X TS+ 0 0 -49.7 -42.5 -177.1 62.0 81.6 30.5 170 -0.8 177 -2.2 171 -0.7 0 0.0 11 36
175 A 182 SER S G G 3 TS+ 0 0 -63.4 -19.5 177.7 54.5 99.8 49.3 0 0.0 0 0.0 0 0.0 0 0.0 8 23
176 A 183 SER S G G < TS+ 0 0 -92.3 -4.3 178.6 93.6 88.0 63.8 173 -1.8 178 -0.8 0 0.0 0 0.0 7 26
177 A 184 ILE I h > X T - 0 0 -97.0 109.4 -178.8 -167.9 55.9 146.1 174 -2.2 181 -2.4 0 0.0 180 -1.0 12 39
178 A 185 ARG R H H > 3 TS+ 0 0 -65.3 -30.3 176.7 60.9 86.3 37.6 176 -0.8 182 -2.1 0 0.0 0 0.0 9 34
179 A 186 LEU L H H 4 3 TS+ 0 0 -65.1 -31.2 177.7 39.5 113.3 38.8 0 0.0 0 0.0 0 0.0 0 0.0 10 48
180 A 187 ARG R H H 4 < TS+ 0 0 -83.7 -47.7 -177.3 42.0 119.2 32.5 177 -1.0 0 0.0 0 0.0 0 0.0 10 47
181 A 188 THR T H H < TS+ 0 0 -75.8 -33.2 -179.1 96.4 91.5 33.4 177 -2.4 0 0.0 0 0.0 0 0.0 9 29
182 A 189 SER S h < > T - 0 0 -61.3 134.7 177.8 -142.5 69.8 112.5 178 -2.1 185 -1.4 0 0.0 0 0.0 7 27
183 A 190 SER S T T 3 TS+ 0 0 -75.5 -3.9 177.0 81.6 90.8 56.1 0 0.0 0 0.0 0 0.0 0 0.0 6 22
184 A 191 THR T T e 3 TS+ 0 0 -68.4 -28.1 -174.9 64.3 87.3 41.8 0 0.0 211 -0.6 0 0.0 0 0.0 6 35
185 A 192 PHE F E E BI < T - 210 0 -108.6 146.2 174.0 -153.8 64.2 146.8 182 -1.4 187 -0.5 0 0.0 0 0.0 11 43
186 A 193 GLN Q E E BI - 209 0 -115.7 122.4 178.3 -146.0 13.7 166.8 209 -2.6 209 -2.5 0 0.0 188 -0.8 9 43
187 A 194 TRP W E E BI - 208 0 -89.3 106.9 -178.5 -177.2 16.5 140.4 185 -0.5 0 0.0 0 0.0 0 0.0 10 54
188 A 195 LEU L S e S+ 0 0 -74.4 -39.0 177.2 59.3 71.2 33.2 207 -2.6 0 0.0 186 -0.8 0 0.0 10 54
189 A 196 ILE I S S S- 0 0 -96.0 117.4 -179.4 -145.8 87.2 157.0 207 -0.8 0 0.0 0 0.0 0 0.0 14 54
190 A 197 PRO P t > T - 0 0 -79.0 165.6 177.8 -105.5 24.8 108.0 0 0.0 193 -2.0 0 0.0 0 0.0 8 43
191 A 198 ASP D T T 3 TS+ 0 0 -62.3 -22.1 -179.3 62.0 118.3 46.1 0 0.0 0 0.0 0 0.0 0 0.0 7 39
192 A 199 SER S T T 3 TS+ 0 0 -83.7 -9.6 178.1 103.4 81.8 60.4 0 0.0 0 0.0 0 0.0 0 0.0 6 28
193 A 200 ALA A t < T - 0 0 -72.3 152.6 176.6 -139.6 65.7 113.0 190 -2.0 195 -0.6 0 0.0 0 0.0 11 40
194 A 201 ASP D + 0 0 -114.9 114.0 -178.8 168.8 26.6 164.8 0 0.0 0 0.0 0 0.0 0 0.0 9 42
195 A 202 THR T + 0 0 -108.0 9.6 179.4 94.6 48.1 79.4 202 -2.8 246 -3.2 193 -0.6 0 0.0 14 53
196 A 203 THR T B B B - 245 0 -107.4 144.8 177.4 -154.8 59.0 148.1 0 0.0 0 0.0 0 0.0 0 0.0 13 51
197 A 204 ALA A S S S+ 0 0 -86.3 -14.2 177.4 82.4 78.2 53.1 244 -2.1 0 0.0 0 0.0 0 0.0 13 43
198 A 205 THR T S S S- 0 0 -78.5 -174.0 180.0 -87.4 103.6 95.8 244 -0.9 0 0.0 0 0.0 0 0.0 8 37
199 A 206 SER S S S S+ 0 0 -72.8 -22.5 178.4 96.4 97.4 45.2 0 0.0 0 0.0 0 0.0 0 0.0 5 24
200 A 207 THR T - 0 0 -64.1 162.4 177.4 -140.3 69.2 100.9 0 0.0 0 0.0 0 0.0 0 0.0 5 27
201 A 208 ASN N + 0 0 -128.3 88.0 -174.1 144.4 46.5 151.8 0 0.0 0 0.0 0 0.0 0 0.0 8 30
202 A 209 CYS C - 0 0 -136.1 143.7 178.5 -140.2 52.9 173.6 0 0.0 195 -2.8 0 0.0 204 -1.0 13 40
203 A 210 ALA A + 0 0 -99.8 63.5 -179.9 142.2 49.1 121.9 0 0.0 0 0.0 0 0.0 0 0.0 17 56
204 A 211 TYR Y e + 0 0 -67.3 -51.4 -176.7 66.1 55.1 21.1 202 -1.0 164 -1.4 0 0.0 162 -1.4 12 64
205 A 212 ASP D E E BH S- 161 0 -84.4 128.9 -176.1 -177.6 71.0 127.6 0 0.0 0 0.0 0 0.0 0 0.0 16 70
206 A 213 ARG R E E BH - 160 0 -131.4 156.4 174.7 -154.7 26.8 156.8 160 -2.6 160 -1.7 0 0.0 0 0.0 15 68
207 A 214 ILE I E E BH - 159 0 -129.9 115.3 -178.3 -177.6 20.2 168.9 0 0.0 188 -2.6 0 0.0 189 -0.8 14 72
208 A 215 VAL V E E BHI - 158 187 -119.9 129.2 179.7 -164.9 5.0 171.1 158 -3.2 158 -4.2 0 0.0 0 0.0 12 69
209 A 216 VAL V E E BHI - 157 186 -121.1 136.2 176.0 -178.5 8.2 161.0 186 -2.5 186 -2.6 0 0.0 0 0.0 14 64
210 A 217 ALA A E E BHI + 156 185 -124.4 153.3 178.7 60.2 44.1 153.9 156 -2.9 156 -1.5 0 0.0 0 0.0 13 48
211 A 218 GLY G S h > TS- 0 0 97.2 132.5 178.3 -112.3 72.2 64.0 184 -0.6 215 -3.1 0 0.0 0 0.0 11 42
212 A 219 SER S H H > TS+ 0 0 -54.8 -47.2 -178.7 48.2 114.2 35.1 0 0.0 216 -1.8 0 0.0 0 0.0 8 32
213 A 220 LEU L H H > TS+ 0 0 -64.4 -51.5 177.8 43.3 116.1 20.8 0 0.0 217 -1.0 0 0.0 0 0.0 9 34
214 A 221 LEU L H H > TS+ 0 0 -60.0 -46.2 177.5 53.4 112.5 26.4 0 0.0 218 -0.8 0 0.0 0 0.0 14 50
215 A 222 GLN Q H H < > TS+ 0 0 -56.9 -40.8 179.4 46.5 110.9 25.9 211 -3.1 218 -0.6 0 0.0 0 0.0 10 43
216 A 223 SER S H H < 3 TS+ 0 0 -77.6 -18.1 176.7 61.6 104.9 46.5 212 -1.8 0 0.0 0 0.0 0 0.0 8 35
217 A 224 SER S H H < 3 TS+ 0 0 -78.2 -20.9 -179.6 104.2 81.1 51.7 213 -1.0 253 -2.7 0 0.0 0 0.0 11 38
218 A 225 VAL V B h < C < TS- 252 0 -66.3 130.5 176.6 -127.2 75.5 123.2 214 -0.8 0 0.0 215 -0.6 0 0.0 11 43
219 A 226 VAL V t > T - 0 0 -80.4 121.9 -177.9 -108.9 34.8 133.1 251 -2.5 222 -2.2 0 0.0 0 0.0 11 31
220 A 227 PRO P T T 3 TS+ 0 0 -59.4 128.0 -178.6 6.5 98.6 103.2 0 0.0 0 0.0 0 0.0 0 0.0 5 24
221 A 228 GLY G T T 3 TS+ 0 0 76.9 6.9 -179.1 110.1 95.9 62.7 0 0.0 0 0.0 0 0.0 0 0.0 5 26
222 A 229 SER S t < T + 0 0 -82.4 -22.4 -178.3 95.8 52.1 48.9 219 -2.2 224 -0.5 0 0.0 0 0.0 9 37
223 A 230 ALA A + 0 0 -78.2 120.5 179.3 113.2 53.9 130.2 0 0.0 0 0.0 0 0.0 0 0.0 13 49
224 A 231 ALA A E E AJ - 249 0 -173.3 164.4 173.7 -82.5 66.8 164.8 249 -1.9 249 -2.8 222 -0.5 0 0.0 11 49
225 A 232 PRO P E E AJ - 248 0 -73.1 146.9 178.2 -129.8 40.9 117.7 0 0.0 227 -0.7 0 0.0 0 0.0 12 56
226 A 233 PHE F e - 0 0 -104.7 106.9 179.9 -150.7 14.3 157.1 247 -2.9 228 -1.4 0 0.0 0 0.0 8 56
227 A 234 ASP D h > T + 0 0 -81.5 98.6 179.8 177.1 19.1 132.8 225 -0.7 231 -2.2 0 0.0 0 0.0 9 50
228 A 235 PHE F H H > TS+ 0 0 -75.0 -24.5 178.6 62.6 75.3 46.7 226 -1.4 232 -1.9 0 0.0 0 0.0 10 46
229 A 236 GLN Q H H > >TS+ 0 0 -62.9 -53.1 176.5 36.9 111.7 15.3 0 0.0 234 -2.0 0 0.0 233 -0.7 11 35
230 A 237 ALA A H H 4 5TS+ 0 0 -64.1 -43.4 -179.8 53.7 116.7 29.0 0 0.0 0 0.0 0 0.0 0 0.0 7 28
231 A 238 ALA A H H < 5TS+ 0 0 -59.2 -45.9 -173.0 31.5 118.8 31.0 227 -2.2 0 0.0 0 0.0 0 0.0 6 24
232 A 239 TYR Y H H < 5TS- 0 0 -100.2 4.1 -179.4 -116.3 105.7 69.9 228 -1.9 0 0.0 0 0.0 0 0.0 6 29
233 A 240 GLY G T h < 5T + 0 0 60.3 46.2 -178.6 161.7 57.2 32.7 229 -0.7 0 0.0 0 0.0 0 0.0 6 20
234 A 241 LEU L t T - 0 0 -81.2 167.0 177.4 -107.5 34.9 114.0 0 0.0 239 -2.7 0 0.0 0 0.0 7 23
236 A 243 ASN N H H > TS+ 0 0 -62.8 -40.4 179.0 53.9 121.9 26.2 0 0.0 240 -3.0 0 0.0 0 0.0 9 25
237 A 244 GLU E H H > TS+ 0 0 -61.1 -44.1 176.7 45.3 109.9 21.0 0 0.0 241 -1.6 0 0.0 0 0.0 7 24
238 A 245 MET M H H > TS+ 0 0 -65.9 -43.4 179.2 51.5 113.0 25.5 0 0.0 242 -1.2 0 0.0 0 0.0 8 34
239 A 246 ALA A H H X > TS+ 0 0 -59.8 -46.5 178.8 48.1 110.3 17.5 235 -2.7 243 -2.3 0 0.0 242 -1.0 13 39
240 A 247 LEU L H H < 3 TS+ 0 0 -65.7 -29.7 175.9 62.2 103.3 35.7 236 -3.0 0 0.0 0 0.0 0 0.0 10 37
241 A 248 ALA A H H < 3 TS+ 0 0 -64.2 -33.0 175.5 42.8 108.9 33.2 237 -1.6 0 0.0 0 0.0 0 0.0 8 38
242 A 249 ILE I H H < < TS- 0 0 -74.4 -55.7 177.6 -41.6 134.0 17.7 238 -1.2 0 0.0 239 -1.0 0 0.0 11 54
243 A 250 SER S h < T - 0 0 -169.3 160.6 175.8 -128.5 31.6 161.9 239 -2.3 0 0.0 0 0.0 0 0.0 11 58
244 A 251 ASP D S S S+ 0 0 -90.1 -7.2 178.0 58.4 96.8 62.1 0 0.0 197 -2.1 0 0.0 198 -0.9 12 50
245 A 252 HIS H B B B S- 196 0 -122.7 151.9 172.5 -134.7 75.9 156.4 0 0.0 0 0.0 0 0.0 0 0.0 13 59
246 A 253 TYR Y - 0 0 -98.4 152.4 173.0 -104.8 34.1 139.0 195 -3.2 0 0.0 0 0.0 0 0.0 14 67
247 A 254 PRO P e - 0 0 -67.1 151.8 172.9 -141.0 28.4 113.4 0 0.0 226 -2.9 0 0.0 0 0.0 13 71
248 A 255 VAL V E E AAJ - 5 225 -113.0 137.9 -177.1 -175.0 28.5 163.9 5 -2.2 5 -2.4 0 0.0 0 0.0 16 65
249 A 256 GLU E E E AAJ - 4 224 -136.4 163.0 177.2 -171.9 18.4 151.0 224 -2.8 224 -1.9 0 0.0 0 0.0 14 60
250 A 257 VAL V E E AA - 3 0 -148.5 154.6 176.2 -134.7 17.6 166.8 3 -2.3 3 -2.7 0 0.0 0 0.0 12 53
251 A 258 THR T E E AA - 2 0 -114.7 136.6 177.1 -160.8 15.5 161.5 0 0.0 219 -2.5 0 0.0 0 0.0 11 43
252 A 259 LEU L B e C 218 0 -116.1 148.0 -179.9 999.9 999.9 149.9 1 -3.1 0 0.0 0 0.0 0 0.0 10 51
253 A 260 THR T 0 0 -127.2 999.9 999.9 999.9 999.9 132.4 217 -2.7 117 -1.7 0 0.0 0 0.0 9 34
2dnjA.pdb
2DNJ ENDONUCLEASE DEOXYRIBONUCLEASE I (DNASE I) (E.C.3.1.21.1) COMPL BOVINE (BOS TAURUS) PANCREAS
author author
Kabs/Sand EEEEEEEEEESHHHHT HHHHHHHHHHHHT SEEEEEEE TTSHHHHHHHHHHTSSSTTS EEEE B SSS BEEEEEE TTTEEEEEEEE Kabs/Sand
chirality -+-------+-+++++-+++++++++++++-++---++++++-++++++++++++++-+++--------+-+-++------+--+++--+------ chirality
bends SS SSSSSS SSSSSSSSSSSSS SS SSSSSSSSSSSSSSSSSSSS SSS SSS bends
turns TTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTT TTTT TTTTT turns
5-turns 5-turns
3-turns >33< >33< >>3<< >33< >33< >33< >33< 3-turns
bridge-2 bbbbb***b CCCC**C DDDD bridge-2
bridge-1 AAAA bbbbb*b DDDD A AC*CCCC EEE*EEEE bridge-1
sheets AAAAAAAAAA AAAAAAA AAAA AAAAAA BBBBBBBB sheets
4-turns >>44<<>>>>XXXXXX<<<< >>>>XXXX<<<< >444< 4-turns
summary eEEEEEEEEEEhHHHHhhHHHHHHHHHHHHhteEEEEEEEetTThHHHHHHHHHHhtStTTt EEEEe B SSS BEEEEEEeTTeEEEEEEEEe summary
sequence LKIAAFNIRTFGETKMSNATLASYIVRIVRRYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSEPLGRNSYKERYLFLFRPNKVSVLDTYQYDDD sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand SS EEEEEEETTSS EEEEEE GGGHHHHHHHHHHHHHHHHHHH EEEEEE STTTS GGGGGG HHHH TTEEESS TT BSSS Kabs/Sand
chirality +-+---------+++-+-++----+----+++++++++++++++++++++-++++--++-+-+++-++--++++++-++++-++---+--++-++-+-+- chirality
bends SS SSSS SSS SSSSSSSSSSSSSSSSSS S SSSSS SSSSSS SSSS SS SS SS SSS bends
turns TTTT TTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTT TTTT turns
5-turns 5-turns
3-turns >33< >>3<< >>3<< >33< >>3XX333< >33< 3-turns
bridge-2 FFFFFF gggg HHHHHH bridge-2
bridge-1 EEEEEEE FFFFFF gggg III B bridge-1
sheets BBBBBBB BBBBBB BBBBBB BBB sheets
4-turns >>>>X<>XXXXXX<<<< >444<>444< >>44<< 4-turns
summary SS eEEEEEEEeTtS eEEEEEEe gGGhHHHHHHHHHHHHHHHHHHHh eEEEEEEe tTTTtgGGGGGGhHHHHhTeEEEeStTTt BSSS summary
sequence SFSREPAVVKFSSHSTKVKEFAIVALHSAPSDAVAEINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIPDSADTTATST sequence
110 120 130 140 150 160 170 180 190 200
author author
Kabs/Sand EEEEEESHHHHHHB TT EE HHHHHT HHHHHHH SB EEEEB Kabs/Sand
chirality +-++-----+-++++++--++++---+++++-+--++++++--+------- chirality
bends S SSSSSSSS SS SSSSS SSSSSSS SS bends
turns TTTTTTTTTTTT TTTTTTTTTTTTTTTTT turns
5-turns >5555< 5-turns
3-turns >33<>33< >33< 3-turns
bridge-2 III JJ bridge-2
bridge-1 HHHHHH C JJ B AAAAC bridge-1
sheets BBBBBB AA AAAA sheets
4-turns >>>><<<< >>>4<<< >>>>X<<<< 4-turns
summary eEEEEEEhHHHHHHhtTTt EEehHHHHHhthHHHHHHHhSB eEEEEe summary
sequence NCAYDRIVVAGSLLQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT sequence
210 220 230 240 250
Messages
chain break between 99(A 99 ) and 100(A 107 )