Secondary structure calculation program - copyright by David Keith Smith, 1989
1tupA.pdb
1TUP COMPLEX (TUMOR SUPPRESSOR/DNA) MOL_ID: 1; MOL_ID: 1;
Sequence length - 196
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 94 SER S 0 0 999.9 171.3 178.3 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 2 11
2 A 95 SER S - 0 0 -55.7 128.8 179.5 -113.5 999.9 110.1 0 0.0 0 0.0 0 0.0 0 0.0 4 16
3 A 96 SER S - 0 0 -66.4 150.5 -178.8 -176.1 38.4 110.8 0 0.0 0 0.0 0 0.0 0 0.0 5 19
4 A 97 VAL V - 0 0 -140.5 163.8 179.4 -71.1 37.3 153.4 0 0.0 0 0.0 0 0.0 0 0.0 6 31
5 A 98 PRO P - 0 0 -63.5 139.7 179.5 -110.8 53.6 108.3 0 0.0 0 0.0 0 0.0 0 0.0 5 43
6 A 99 SER S + 0 0 -68.2 143.7 -179.7 176.8 34.8 113.0 0 0.0 0 0.0 0 0.0 0 0.0 4 41
7 A 100 GLN Q + 0 0 -133.2 10.4 -178.7 127.3 31.4 72.4 0 0.0 0 0.0 0 0.0 0 0.0 8 39
8 A 101 LYS K - 0 0 -79.6 141.2 179.7 -104.9 63.3 123.2 0 0.0 0 0.0 0 0.0 0 0.0 7 31
9 A 102 THR T + 0 0 -65.5 128.1 179.8 172.2 39.8 109.5 0 0.0 0 0.0 0 0.0 0 0.0 8 33
10 A 103 TYR Y B B A - 174 0 -144.6 110.4 179.6 -171.2 17.8 154.3 174 -2.8 174 -2.9 0 0.0 0 0.0 8 31
11 A 104 GLN Q t >T - 0 0 -72.0 -29.4 176.6 -163.9 33.1 38.5 0 0.0 16 -2.9 0 0.0 0 0.0 12 32
12 A 105 GLY G T T >5T - 0 0 71.9 177.9 -178.9 -53.1 42.8 90.9 0 0.0 15 -1.5 0 0.0 0 0.0 9 32
13 A 106 SER S T T 35TS+ 0 0 -64.7 -21.4 -178.9 55.2 135.6 44.4 0 0.0 0 0.0 0 0.0 0 0.0 7 26
14 A 107 TYR Y T T 35TS- 0 0 -97.6 12.8 179.5 -116.3 110.8 79.8 0 0.0 55 -3.0 0 0.0 56 -0.9 12 37
15 A 108 GLY G T T <5T - 0 0 52.6 46.8 -179.5 -162.9 39.7 27.2 12 -1.5 0 0.0 0 0.0 0 0.0 10 32
16 A 109 PHE F t T - 0 0 -55.5 158.4 -178.5 -102.5 66.7 99.3 0 0.0 29 -1.9 0 0.0 0 0.0 7 25
27 A 120 LYS K T T 3 TS+ 0 0 -59.9 -17.4 -179.7 62.4 117.3 46.3 0 0.0 0 0.0 0 0.0 0 0.0 8 23
28 A 121 SER S T T 3 TS+ 0 0 -87.0 -5.0 -178.9 126.2 73.4 57.5 0 0.0 0 0.0 0 0.0 0 0.0 6 26
29 A 122 VAL V t < T - 0 0 -64.1 135.6 -177.9 -176.5 35.0 109.5 26 -1.9 0 0.0 0 0.0 0 0.0 12 35
30 A 123 THR T S e S+ 0 0 -101.3 -18.4 -178.4 12.2 78.8 59.9 0 0.0 43 -2.5 0 0.0 0 0.0 12 43
31 A 124 CYS C E E BB S+ 42 0 -165.4 124.7 179.6 169.9 70.4 149.8 0 0.0 0 0.0 0 0.0 0 0.0 13 51
32 A 125 THR T E E BB - 41 0 -145.1 138.4 -178.1 -146.5 18.5 175.6 41 -3.2 41 -3.5 0 0.0 0 0.0 16 53
33 A 126 TYR Y E E BB - 40 0 -111.4 136.5 178.8 -147.9 4.8 151.4 21 -0.6 0 0.0 0 0.0 0 0.0 13 51
34 A 127 SER S E E >BB >T - 39 0 -102.6 105.3 179.7 -165.8 4.2 144.9 39 -4.0 39 -1.6 0 0.0 38 -1.6 11 45
35 A 128 PRO P T T 4 5TS+ 0 0 -54.7 -32.6 -179.4 53.4 90.0 36.8 0 0.0 0 0.0 0 0.0 0 0.0 6 35
36 A 129 ALA A T T 4 5TS+ 0 0 -76.0 -21.6 -178.6 34.0 118.7 43.0 0 0.0 0 0.0 0 0.0 0 0.0 6 27
37 A 130 LEU L T T 4 5TS- 0 0 -105.6 -10.5 -174.0 -132.8 98.9 56.9 0 0.0 0 0.0 0 0.0 0 0.0 7 33
38 A 131 ASN N T e < 5T + 0 0 53.5 38.2 -175.7 137.9 65.9 30.6 34 -1.6 178 -2.9 0 0.0 0 0.0 9 41
39 A 132 LYS K E E BBc T - 0 0 -91.9 156.6 179.2 -84.4 51.2 128.3 30 -2.5 46 -1.6 0 0.0 0 0.0 13 44
44 A 137 LEU L T T 3 TS- 0 0 -63.5 128.8 176.9 -4.5 107.8 113.9 0 0.0 0 0.0 0 0.0 0 0.0 12 49
45 A 138 ALA A T T 3 TS+ 0 0 68.4 9.2 -178.9 125.4 102.4 61.0 143 -2.4 0 0.0 0 0.0 0 0.0 8 47
46 A 139 LYS K t < T - 0 0 -99.4 163.3 179.7 -79.2 69.5 125.3 43 -1.6 0 0.0 0 0.0 0 0.0 10 41
47 A 140 THR T - 0 0 -60.4 135.1 178.7 -177.1 40.7 107.3 0 0.0 0 0.0 0 0.0 0 0.0 10 42
48 A 141 CYS C E E A D - 0 141 -131.7 98.8 -179.2 -152.9 14.5 155.0 141 -1.5 141 -2.5 0 0.0 0 0.0 11 54
49 A 142 PRO P E E A D - 0 140 -80.0 146.4 178.4 -168.9 9.9 124.9 0 0.0 0 0.0 0 0.0 0 0.0 10 49
50 A 143 VAL V E E A D - 0 139 -134.9 124.0 -177.6 -143.3 11.3 174.5 139 -2.4 139 -1.9 0 0.0 0 0.0 12 65
51 A 144 GLN Q E E AAD - 19 138 -96.3 128.5 178.0 -150.9 1.6 140.7 19 -2.2 19 -3.3 0 0.0 53 -0.5 11 52
52 A 145 LEU L E E AAD - 18 137 -97.0 128.5 177.4 -167.3 12.3 146.4 137 -3.2 137 -2.2 0 0.0 0 0.0 12 55
53 A 146 TRP W E E AA + 17 0 -113.4 131.0 179.8 172.4 11.1 159.7 17 -3.3 17 -2.4 51 -0.5 0 0.0 12 44
54 A 147 VAL V - 0 0 -139.8 148.6 -176.4 -152.2 29.4 166.6 0 0.0 0 0.0 0 0.0 0 0.0 11 43
55 A 148 ASP D S S S+ 0 0 -94.9 -19.2 179.3 17.2 90.8 53.0 14 -3.0 0 0.0 0 0.0 0 0.0 7 28
56 A 149 SER S S S S- 0 0 -147.8 147.0 -178.5 -95.3 98.0 160.2 14 -0.9 0 0.0 0 0.0 0 0.0 6 27
57 A 150 THR T - 0 0 -74.7 134.3 178.6 -122.1 39.3 122.2 0 0.0 0 0.0 0 0.0 0 0.0 7 35
58 A 151 PRO P - 0 0 -66.1 165.2 179.9 -88.1 37.7 100.7 0 0.0 0 0.0 0 0.0 0 0.0 7 39
59 A 152 PRO P t > T - 0 0 -64.5 172.1 179.5 -79.9 55.5 93.1 0 0.0 62 -1.1 0 0.0 0 0.0 6 30
60 A 153 PRO P T T 3 TS+ 0 0 -80.2 147.4 -179.6 36.9 115.6 121.5 0 0.0 0 0.0 0 0.0 0 0.0 6 24
61 A 154 GLY G T T 3 TS+ 0 0 95.5 -2.3 -179.2 155.1 81.3 67.8 0 0.0 0 0.0 0 0.0 0 0.0 8 27
62 A 155 THR T e < T - 0 0 -61.5 134.9 -178.2 -161.9 24.6 110.9 59 -1.1 127 -3.9 0 0.0 0 0.0 12 42
63 A 156 ARG R E E BEF - 165 126 -121.1 154.6 179.0 -142.6 12.5 147.0 165 -2.9 165 -2.5 0 0.0 0 0.0 12 48
64 A 157 VAL V E E BEF - 164 125 -122.9 120.6 -176.3 -170.3 21.6 169.0 125 -2.4 125 -1.5 0 0.0 0 0.0 12 67
65 A 158 ARG R E E BEF - 163 124 -118.1 141.9 178.4 -160.9 9.0 153.3 163 -2.8 163 -3.0 0 0.0 0 0.0 13 65
66 A 159 ALA A E E BEF + 162 123 -122.7 142.1 179.8 172.3 11.9 160.1 123 -2.5 123 -1.8 0 0.0 0 0.0 12 68
67 A 160 MET M E E BE - 161 0 -145.9 138.1 178.4 -142.8 21.1 174.9 161 -1.6 161 -3.7 0 0.0 0 0.0 11 65
68 A 161 ALA A E E BE + 160 0 -102.9 138.0 177.8 172.9 23.0 149.0 0 0.0 80 -0.6 0 0.0 0 0.0 13 66
69 A 162 ILE I E E BEB - 159 79 -137.1 152.7 177.8 -94.7 41.1 164.9 159 -1.7 159 -2.7 0 0.0 0 0.0 13 58
70 A 163 TYR Y E E BE - 158 0 -69.4 140.4 -179.2 -141.8 28.6 119.3 78 -0.6 0 0.0 0 0.0 0 0.0 15 46
71 A 164 LYS K S e S+ 0 0 -68.0 -40.8 -179.0 78.4 76.7 30.5 157 -3.0 0 0.0 0 0.0 0 0.0 11 39
72 A 165 GLN Q S g > > TS- 0 0 -73.6 140.7 -179.0 -132.8 78.4 117.5 0 0.0 75 -1.5 0 0.0 76 -0.7 8 27
73 A 166 SER S G G 4 > TS+ 0 0 -61.9 -34.7 -178.0 63.7 103.9 29.6 0 0.0 76 -0.8 0 0.0 0 0.0 6 23
74 A 167 GLN Q G G 4 3 TS+ 0 0 -64.7 -11.2 -177.4 32.1 113.5 52.7 0 0.0 0 0.0 0 0.0 0 0.0 5 23
75 A 168 HIS H G G 4 X TS+ 0 0 -126.1 0.0 -177.8 107.0 84.3 70.6 72 -1.5 78 -2.3 0 0.0 0 0.0 8 28
76 A 169 MET M T g < < TS+ 0 0 -55.7 -26.3 -178.9 59.3 75.6 46.0 73 -0.8 0 0.0 72 -0.7 0 0.0 11 35
77 A 170 THR T T T 3 TS+ 0 0 -82.5 -5.7 179.6 96.5 87.3 58.3 0 0.0 0 0.0 0 0.0 0 0.0 9 31
78 A 171 GLU E S t < TS- 0 0 -90.6 126.6 -179.8 -129.2 77.3 137.7 75 -2.3 70 -0.6 0 0.0 0 0.0 7 39
79 A 172 VAL V B B B - 69 0 -74.8 126.6 179.1 -124.2 22.6 126.2 0 0.0 0 0.0 0 0.0 0 0.0 10 48
80 A 173 VAL V + 0 0 -75.0 128.7 178.8 148.3 49.6 126.8 68 -0.6 0 0.0 0 0.0 0 0.0 12 61
81 A 174 ARG R - 0 0 -153.3 165.9 179.6 -79.2 49.8 163.0 0 0.0 0 0.0 0 0.0 0 0.0 10 59
82 A 175 ARG R - 0 0 -71.9 148.3 178.1 -108.1 49.3 115.1 99 -2.3 0 0.0 0 0.0 0 0.0 14 51
83 A 176 CYS C h > T - 0 0 -63.1 170.8 -179.2 -100.4 38.0 92.5 0 0.0 87 -2.3 0 0.0 0 0.0 13 36
84 A 177 PRO P H H > TS+ 0 0 -66.8 -43.6 178.6 56.8 121.5 18.3 0 0.0 88 -1.8 0 0.0 0 0.0 8 28
85 A 178 HIS H H H 4 TS+ 0 0 -47.5 -53.4 -179.4 42.7 113.5 18.8 0 0.0 0 0.0 0 0.0 0 0.0 7 27
86 A 179 HIS H H H 4 > TS+ 0 0 -62.4 -53.5 179.2 52.5 108.2 23.2 0 0.0 89 -2.7 0 0.0 0 0.0 10 37
87 A 180 GLU E H H < 3 TS+ 0 0 -52.4 -31.3 -179.3 54.5 110.9 32.5 83 -2.3 0 0.0 0 0.0 0 0.0 10 35
88 A 181 ARG R T h < 3 TS+ 0 0 -79.2 -8.4 -179.7 107.8 88.4 60.4 84 -1.8 0 0.0 0 0.0 0 0.0 7 23
89 A 182 CYS C S t < TS- 0 0 -72.8 147.4 175.2 -126.2 76.2 114.2 86 -2.7 91 -1.6 0 0.0 0 0.0 8 27
90 A 183 SER S S S S+ 0 0 -90.1 92.2 179.5 119.6 71.7 137.5 0 0.0 0 0.0 0 0.0 0 0.0 4 22
91 A 184 ASP D + 0 0 -141.0 21.5 179.9 148.5 32.7 84.4 89 -1.6 0 0.0 0 0.0 0 0.0 4 30
92 A 185 SER S - 0 0 -63.6 132.0 176.8 -161.8 39.1 110.8 0 0.0 0 0.0 0 0.0 0 0.0 9 31
93 A 186 ASP D - 0 0 -92.2 6.5 -179.9 -108.3 53.6 74.1 0 0.0 0 0.0 0 0.0 0 0.0 5 35
94 A 187 GLY G S S S+ 0 0 84.8 -11.0 179.5 61.1 108.4 68.6 0 0.0 0 0.0 0 0.0 0 0.0 4 24
95 A 188 LEU L S S S+ 0 0 -115.2 -39.4 -177.6 76.5 83.4 41.3 0 0.0 0 0.0 0 0.0 0 0.0 6 33
96 A 189 ALA A S S S- 0 0 -81.0 147.0 177.6 -112.3 80.6 117.4 0 0.0 0 0.0 0 0.0 0 0.0 9 44
97 A 190 PRO P t > T - 0 0 -74.8 137.2 -177.6 -119.4 30.5 122.0 0 0.0 100 -1.8 0 0.0 0 0.0 7 41
98 A 191 PRO P T T 3 TS+ 0 0 -50.1 -21.7 -178.7 53.9 107.8 51.8 0 0.0 0 0.0 0 0.0 0 0.0 8 38
99 A 192 GLN Q T T 3 TS+ 0 0 -92.9 -14.6 -179.1 105.9 81.7 49.9 0 0.0 82 -2.3 0 0.0 0 0.0 9 47
100 A 193 HIS H t < T - 0 0 -71.7 132.2 177.9 -160.7 53.0 118.3 97 -1.8 0 0.0 0 0.0 0 0.0 13 58
101 A 194 LEU L S e S+ 0 0 -74.6 -35.7 -177.3 61.3 76.0 34.2 0 0.0 144 -3.4 0 0.0 103 -0.5 11 74
102 A 195 ILE I E E AG + 143 0 -106.1 126.9 178.0 175.2 61.3 147.9 0 0.0 0 0.0 0 0.0 0 0.0 13 73
103 A 196 ARG R E E AG - 142 0 -120.0 163.9 177.0 -129.3 26.2 140.4 142 -2.8 142 -1.8 101 -0.5 105 -0.5 11 60
104 A 197 VAL V E E AG - 141 0 -117.4 127.3 -178.3 -139.4 26.2 167.6 0 0.0 0 0.0 0 0.0 0 0.0 11 54
105 A 198 GLU E E E AG - 140 0 -90.0 144.5 178.3 -2.1 68.8 127.3 140 -5.1 140 -0.5 103 -0.5 0 0.0 9 43
106 A 199 GLY G S S S+ 0 0 48.0 46.5 179.2 114.8 93.2 33.9 0 0.0 0 0.0 0 0.0 0 0.0 5 32
107 A 200 ASN N t > T - 0 0 -146.5 97.0 180.0 -171.7 42.5 147.1 0 0.0 110 -1.7 0 0.0 0 0.0 7 33
108 A 201 LEU L T T 3 TS+ 0 0 -66.0 -7.0 178.7 64.6 87.3 62.4 0 0.0 0 0.0 0 0.0 0 0.0 4 23
109 A 202 ARG R T T 3 TS+ 0 0 -98.7 6.9 178.5 132.2 77.0 73.2 0 0.0 0 0.0 0 0.0 0 0.0 6 29
110 A 203 VAL V t < T - 0 0 -60.6 139.2 -178.0 -162.3 39.5 105.2 107 -1.7 0 0.0 0 0.0 0 0.0 11 39
111 A 204 GLU E E E BH - 124 0 -136.5 134.0 -178.5 -155.0 6.8 175.4 124 -3.1 124 -3.8 0 0.0 0 0.0 7 41
112 A 205 TYR Y E E BH - 123 0 -111.7 136.4 -179.7 -163.0 7.9 150.8 0 0.0 0 0.0 0 0.0 0 0.0 10 41
113 A 206 LEU L E E BH - 122 0 -121.0 145.5 175.0 -166.8 17.4 155.5 122 -2.3 122 -1.6 0 0.0 115 -0.5 7 38
114 A 207 ASP D E E BH - 121 0 -123.5 95.9 -177.0 -125.5 40.2 165.0 0 0.0 0 0.0 0 0.0 0 0.0 8 33
115 A 208 ASP D e > T - 0 0 -54.2 123.6 -178.7 -150.4 13.4 110.6 120 -3.0 119 -1.7 113 -0.5 0 0.0 8 28
116 A 209 ARG R T T 4 TS+ 0 0 -62.8 -34.0 -178.3 34.8 93.8 34.6 0 0.0 0 0.0 0 0.0 0 0.0 5 11
117 A 210 ASN N T T 4 TS+ 0 0 -90.1 -42.2 -178.2 28.7 128.7 30.4 0 0.0 0 0.0 0 0.0 0 0.0 5 15
118 A 211 THR T T T 4 TS- 0 0 -100.7 -5.7 -179.5 -132.3 88.1 64.4 0 0.0 0 0.0 0 0.0 0 0.0 5 23
119 A 212 PHE F t < T + 0 0 68.4 -5.5 -179.4 146.6 60.1 68.4 115 -1.7 0 0.0 0 0.0 0 0.0 8 29
120 A 213 ARG R e - 0 0 -64.2 141.2 -179.6 -134.4 42.3 105.3 0 0.0 115 -3.0 0 0.0 0 0.0 9 41
121 A 214 HIS H E E B H + 0 114 -101.1 148.9 177.8 158.6 30.0 137.8 0 0.0 0 0.0 0 0.0 0 0.0 14 50
122 A 215 SER S E E B H - 0 113 -161.8 162.1 -179.4 -138.3 28.4 170.5 113 -1.6 113 -2.3 0 0.0 0 0.0 13 56
123 A 216 VAL V E E BFH - 66 112 -130.9 130.2 -178.3 -170.1 19.9 175.0 66 -1.8 66 -2.5 0 0.0 0 0.0 14 54
124 A 217 VAL V E E BFH + 65 111 -124.0 148.6 177.4 179.0 8.2 158.4 111 -3.8 111 -3.1 0 0.0 0 0.0 11 55
125 A 218 VAL V E E BF - 64 0 -137.3 157.6 178.0 -95.0 41.8 157.4 64 -1.5 64 -2.4 0 0.0 0 0.0 11 48
126 A 219 PRO P E E BF - 63 0 -74.7 146.2 179.5 -108.9 47.9 124.1 0 0.0 0 0.0 0 0.0 0 0.0 10 43
127 A 220 TYR Y e - 0 0 -75.3 131.7 179.5 -162.5 37.6 126.1 62 -3.9 0 0.0 0 0.0 0 0.0 8 53
128 A 221 GLU E - 0 0 -117.2 144.2 178.9 -116.0 18.2 156.5 0 0.0 0 0.0 0 0.0 0 0.0 5 45
129 A 222 PRO P - 0 0 -69.8 165.6 -179.0 -75.8 52.0 104.4 0 0.0 0 0.0 0 0.0 0 0.0 7 35
130 A 223 PRO P - 0 0 -69.6 131.0 179.3 -100.6 53.9 117.8 0 0.0 0 0.0 0 0.0 0 0.0 10 32
131 A 224 GLU E - 0 0 -50.0 104.3 -179.8 -89.1 58.5 109.7 0 0.0 0 0.0 0 0.0 0 0.0 8 17
132 A 225 VAL V S S S+ 0 0 -17.8 128.5 -177.3 32.3 123.1 69.8 0 0.0 0 0.0 0 0.0 0 0.0 4 11
133 A 226 GLY G S S S+ 0 0 87.3 3.6 179.2 119.1 106.8 56.8 0 0.0 0 0.0 0 0.0 0 0.0 5 10
134 A 227 SER S - 0 0 -115.7 144.2 -179.6 -159.1 57.4 150.9 0 0.0 0 0.0 0 0.0 0 0.0 7 20
135 A 228 ASP D S S S+ 0 0 -83.0 -35.8 -178.6 5.6 76.8 42.5 0 0.0 0 0.0 0 0.0 0 0.0 7 26
136 A 229 CYS C S S S- 0 0 -146.5 178.2 179.5 -96.8 75.2 151.7 0 0.0 0 0.0 0 0.0 0 0.0 11 32
137 A 230 THR T E E AD - 52 0 -102.1 137.3 -179.6 -147.7 33.5 146.9 52 -2.2 52 -3.2 0 0.0 0 0.0 12 46
138 A 231 THR T E E AD - 51 0 -110.7 141.0 177.6 -172.7 12.3 151.7 0 0.0 0 0.0 0 0.0 0 0.0 9 44
139 A 232 ILE I E E AD - 50 0 -126.6 135.1 179.4 -142.4 17.0 170.1 50 -1.9 50 -2.4 0 0.0 141 -0.7 11 53
140 A 233 HIS H E E ADG - 49 105 -106.5 106.8 -179.6 -178.3 24.4 152.1 105 -0.5 105 -5.1 0 0.0 0 0.0 11 51
141 A 234 TYR Y E E ADG - 48 104 -97.3 159.6 177.6 -158.6 11.3 126.4 48 -2.5 48 -1.5 139 -0.7 0 0.0 12 64
142 A 235 ASN N E E A G - 0 103 -138.2 140.2 178.0 -146.1 9.0 171.7 103 -1.8 103 -2.8 0 0.0 144 -0.5 13 60
143 A 236 TYR Y E E A G - 0 102 -109.8 123.0 -175.7 -164.1 10.9 163.6 0 0.0 45 -2.4 0 0.0 0 0.0 14 67
144 A 237 MET M e + 0 0 -97.3 21.3 -178.8 44.2 63.0 83.8 101 -3.4 0 0.0 142 -0.5 0 0.0 12 63
145 A 238 CYS C S S S- 0 0 -157.2 148.9 -178.4 -111.8 80.0 168.8 0 0.0 0 0.0 0 0.0 0 0.0 13 55
146 A 239 ASN N t > T - 0 0 -91.8 158.5 179.9 -124.6 18.1 126.6 0 0.0 149 -1.9 0 0.0 0 0.0 12 51
147 A 240 SER S T T 3 TS+ 0 0 -63.4 -24.3 -177.9 53.3 113.9 42.8 181 -2.2 155 -5.9 0 0.0 0 0.0 13 49
148 A 241 SER S T T 3 TS+ 0 0 -90.9 -2.3 -178.9 126.1 74.0 63.2 0 0.0 150 -0.6 0 0.0 0 0.0 9 36
149 A 242 CYS C t X>T - 0 0 -59.9 106.9 178.9 -142.9 57.2 114.6 146 -1.9 152 -2.2 0 0.0 154 -1.6 11 35
150 A 243 MET M T T 35TS+ 0 0 -66.3 143.7 -179.7 37.1 92.1 118.8 148 -0.6 0 0.0 0 0.0 0 0.0 8 23
151 A 244 GLY G T T 35TS+ 0 0 95.3 -10.0 177.8 47.9 122.9 63.5 0 0.0 0 0.0 0 0.0 0 0.0 7 26
152 A 245 GLY G T T <5TS- 0 0 -128.8 -127.2 178.9 -19.3 130.3 93.2 149 -2.2 0 0.0 0 0.0 0 0.0 14 41
153 A 246 MET M T T >5TS- 0 0 -57.9 -34.7 177.4 -161.8 75.8 32.5 0 0.0 156 -1.4 0 0.0 0 0.0 16 46
154 A 247 ASN N T T 3 T - 0 0 -70.8 174.3 -179.6 -87.9 49.1 99.2 170 -1.6 169 -2.4 0 0.0 0 0.0 13 30
167 A 260 SER S T T 3 TS+ 0 0 -57.2 -19.4 -179.5 55.4 130.3 43.6 0 0.0 0 0.0 0 0.0 0 0.0 9 25
168 A 261 SER S T T 3 TS- 0 0 -94.0 0.3 177.9 -104.8 121.4 66.5 0 0.0 0 0.0 0 0.0 0 0.0 5 22
169 A 262 GLY G t < T + 0 0 92.7 1.4 179.0 147.2 69.8 62.3 166 -2.4 0 0.0 0 0.0 0 0.0 6 31
170 A 263 ASN N e - 0 0 -69.2 152.8 179.3 -100.7 55.2 109.8 0 0.0 166 -1.6 0 0.0 0 0.0 7 29
171 A 264 LEU L E E B I + 0 165 -78.9 126.1 178.3 162.4 45.1 127.7 0 0.0 0 0.0 0 0.0 0 0.0 9 37
172 A 265 LEU L E E B * - 0 0 -112.4 -23.6 180.0 -21.2 69.3 53.3 164 -3.6 0 0.0 0 0.0 0 0.0 12 44
173 A 266 GLY G E E B I - 0 164 -179.0 157.8 179.4 -157.7 53.8 158.1 164 -1.4 164 -3.2 0 0.0 0 0.0 14 45
174 A 267 ARG R E E BAI + 10 163 -152.0 145.7 179.4 164.3 13.3 171.8 10 -2.9 10 -2.8 0 0.0 0 0.0 16 48
175 A 268 ASN N E E B I - 0 162 -150.2 165.6 -179.8 -160.8 13.4 159.4 162 -2.4 162 -2.9 0 0.0 0 0.0 15 48
176 A 269 SER S E E B I - 0 161 -155.4 161.8 178.7 -172.8 11.7 169.7 0 0.0 0 0.0 0 0.0 0 0.0 12 50
177 A 270 PHE F E E B I - 0 160 -150.7 150.2 178.7 -114.2 29.5 169.2 160 -1.8 160 -3.8 0 0.0 0 0.0 10 53
178 A 271 GLU E E E BcI - 39 159 -81.8 160.0 -179.5 -156.8 33.8 118.9 38 -2.9 40 -3.0 0 0.0 0 0.0 13 57
179 A 272 VAL V E E BcI - 40 158 -143.0 147.9 178.8 -169.8 17.7 173.0 158 -2.0 158 -1.0 0 0.0 0 0.0 12 67
180 A 273 ARG R E E Bc - 41 0 -137.9 112.8 179.6 -157.0 11.1 164.0 40 -2.1 42 -2.2 0 0.0 182 -0.8 12 63
181 A 274 VAL V E E Bc + 42 0 -93.9 108.2 -177.6 141.0 38.1 147.4 0 0.0 147 -2.2 0 0.0 0 0.0 13 61
182 A 275 CYS C e - 0 0 -145.7 166.3 179.9 -108.3 61.4 162.7 42 -2.7 0 0.0 180 -0.8 0 0.0 13 49
183 A 276 ALA A S S S+ 0 0 -63.8 -42.5 -179.4 38.7 108.8 30.3 0 0.0 0 0.0 0 0.0 0 0.0 7 38
184 A 277 CYS C h > T + 0 0 -118.8 87.9 -178.6 170.4 60.6 137.4 0 0.0 188 -2.5 0 0.0 0 0.0 11 35
185 A 278 PRO P H H > TS+ 0 0 -60.6 -39.2 178.9 49.3 80.5 32.0 0 0.0 189 -2.1 0 0.0 0 0.0 17 46
186 A 279 GLY G H H > TS+ 0 0 -65.0 -48.3 178.9 45.0 114.7 19.7 0 0.0 190 -2.3 0 0.0 0 0.0 15 39
187 A 280 ARG R H H > TS+ 0 0 -58.8 -55.5 178.7 45.5 116.0 18.3 0 0.0 191 -2.1 0 0.0 0 0.0 10 32
188 A 281 ASP D H H X TS+ 0 0 -57.9 -47.0 -179.2 49.1 113.8 23.4 184 -2.5 192 -2.7 0 0.0 0 0.0 10 44
189 A 282 ARG R H H X TS+ 0 0 -59.8 -47.4 -179.4 49.5 110.6 19.5 185 -2.1 193 -1.2 0 0.0 0 0.0 13 42
190 A 283 ARG R H H X TS+ 0 0 -52.4 -53.0 178.4 47.0 114.3 22.3 186 -2.3 194 -1.0 0 0.0 0 0.0 9 36
191 A 284 THR T H H X > TS+ 0 0 -56.8 -60.0 179.2 50.3 109.0 20.5 187 -2.1 195 -1.6 0 0.0 194 -0.7 8 28
192 A 285 GLU E H H < 3 TS+ 0 0 -57.9 -21.4 -179.9 44.6 116.3 41.9 188 -2.7 0 0.0 0 0.0 0 0.0 8 32
193 A 286 GLU E H H < 3 TS+ 0 0 -91.8 -21.0 179.3 65.5 102.7 49.0 189 -1.2 0 0.0 0 0.0 0 0.0 10 25
194 A 287 GLU E H H < < TS+ 0 0 -67.5 -31.3 177.4 50.3 99.9 32.2 190 -1.0 0 0.0 191 -0.7 0 0.0 6 17
195 A 288 ASN N h < T 0 0 -77.6 -14.1 179.4 999.9 999.9 52.9 191 -1.6 0 0.0 0 0.0 0 0.0 5 13
196 A 289 LEU L 0 0 118.6 999.9 999.9 999.9 999.9 63.4 0 0.0 0 0.0 0 0.0 0 0.0 4 14
1tupA.pdb
1TUP COMPLEX (TUMOR SUPPRESSOR/DNA) MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand B TTTT EEE TT SEEEETTTTEEEE TT EEEEEE SS TT EEEEEEEESSGGGTTSB HHHHTSS SSS TT Kabs/Sand
chirality ----++-+---+--+-----+--+-++-++---++-+--+---+-------+-+----++----+-+--+-+++++--+---+++++-++--++--++- chirality
bends SS SS SS SSS SS SS SS SSSSSSSS SSSSSSS SSS SS bends
turns TTTTTT TTTT TTTTTT TTTT TTTT TTTTTTT TTTTTTT TTTT turns
5-turns >5555< >5555< 5-turns
3-turns >33< >33< >33< >33< >>3X<3< >33< >33< 3-turns
bridge-2 cccc DDDDD FFFF B bridge-2
bridge-1 A AAA BBBB BBBB AAA EEEEEEEE B bridge-1
sheets AAA BBBB BBBB AAAAAA BBBBBBBB sheets
4-turns >444< >444< >>44<< 4-turns
summary BtTTTTtEEE tTTteEEEETTTeEEEEeTTt EEEEEE SS tTTeEEEEEEEEegGGGgTtB hHHHHhtS SSStTTt summary
sequence SSSVPSQKTYQGSYGFRLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSDSDGLAPPQH sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand SEEEES TT EEEE TTT EEEEEE SS SSEEEEEEE S TT TTTTTT EEEEEEEE TT EEEEEEEEEEE S HHHHHHHHHH Kabs/Sand
chirality ++---+-++------++-+-+--+-------++-+--------+--++-++---+--------+--+-+-+--+------+-++++++++++++ chirality
bends S S SS SSS SS SS S SS SSSS S SS S SSSSSSSSSS bends
turns TTTT TTTTT TTTTTTTTTTT TTTT TTTTTTTTTTTT turns
5-turns >5555< 5-turns
3-turns >33< >33X33<>33< >33< >33< 3-turns
bridge-2 HHHH GGGG IIIIIIII I*IIIIIII bridge-2
bridge-1 GGGG HHHH FFFF DDDDD EEEEEEEE A cccc bridge-1
sheets AAAA BBBB BBBBBB AAAAAAA BBBBBBBB BBBBBBBBBBB sheets
4-turns >444< >>>>XXXX<<<< 4-turns
summary eEEEEStTTtEEEEeTTTteEEEEEEe SS SSEEEEEEEeStTTtTTTTTTteEEEEEEEEeTTteEEEEEEEEEEEeShHHHHHHHHHHh summary
sequence LIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENL sequence
110 120 130 140 150 160 170 180 190