Secondary structure calculation program - copyright by David Keith Smith, 1989
1qgtA.pdb
1QGT VIRAL CAPSID PROTEIN MOL_ID: 1; MOL_ID: 1;
Sequence length - 142
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 1 MET M 0 0 999.9 150.7 179.9 999.9 999.9 999.9 0 0.0 3 -0.7 0 0.0 0 0.0 2 5
2 A 2 ASP D - 0 0 -113.1 88.0 -179.0 -175.7 999.9 143.1 0 0.0 4 -0.5 0 0.0 0 0.0 3 10
3 A 3 ILE I - 0 0 -85.7 123.8 178.1 -145.9 15.7 136.5 1 -0.7 0 0.0 0 0.0 0 0.0 5 14
4 A 4 ASP D t > T - 0 0 -92.6 121.6 -179.7 -143.5 7.2 143.5 2 -0.5 7 -1.7 0 0.0 0 0.0 8 23
5 A 5 PRO P T T 3 TS+ 0 0 -44.8 -45.2 -176.9 37.8 100.1 27.8 0 0.0 0 0.0 0 0.0 0 0.0 7 36
6 A 6 TYR Y T T 3>TS+ 0 0 -92.3 1.9 -178.1 92.2 88.8 66.0 0 0.0 11 -1.9 0 0.0 0 0.0 9 42
7 A 7 LYS K T T X5TS+ 0 0 -61.0 -62.6 179.9 46.5 87.0 11.2 4 -1.7 10 -1.7 0 0.0 0 0.0 10 26
8 A 8 GLU E T T 35TS+ 0 0 -52.4 -24.4 179.6 61.0 107.8 42.5 0 0.0 0 0.0 0 0.0 0 0.0 7 28
9 A 9 PHE F T T 35TS- 0 0 -94.7 29.7 177.0 -104.6 120.0 88.3 0 0.0 0 0.0 0 0.0 0 0.0 8 39
10 A 10 GLY G T T <5TS+ 0 0 68.1 4.2 178.0 80.0 95.0 57.6 7 -1.7 0 0.0 0 0.0 0 0.0 8 32
11 A 11 ALA A t > T - 0 0 -177.0 139.7 177.9 -105.2 31.6 149.9 0 0.0 16 -2.1 0 0.0 15 -1.1 11 33
13 A 13 VAL V H H > 3 TS+ 0 0 -36.6 -42.9 179.6 55.7 122.4 32.2 0 0.0 17 -1.2 0 0.0 0 0.0 10 34
14 A 14 GLU E H H 4 3 TS+ 0 0 -58.4 -48.1 -177.0 47.0 107.8 20.2 0 0.0 0 0.0 0 0.0 0 0.0 6 28
15 A 15 LEU L H H 4 X TS+ 0 0 -61.6 -49.9 -179.9 54.5 106.7 20.3 12 -1.1 18 -2.6 0 0.0 0 0.0 9 35
16 A 16 LEU L H H < > TS+ 0 0 -55.7 -25.0 178.9 79.2 90.0 39.2 12 -2.1 19 -1.7 0 0.0 0 0.0 9 47
17 A 17 SER S T h < 3 TS+ 0 0 -52.3 -26.8 -178.6 77.9 74.7 37.1 13 -1.2 0 0.0 0 0.0 0 0.0 7 37
18 A 18 PHE F T G < TS+ 0 0 -50.1 -45.5 179.6 78.0 81.3 21.8 15 -2.6 0 0.0 0 0.0 0 0.0 11 34
19 A 19 LEU L S g < TS- 0 0 -69.6 129.5 179.3 -116.9 92.6 117.6 16 -1.7 0 0.0 0 0.0 0 0.0 9 41
20 A 20 PRO P g > T - 0 0 -68.5 130.4 -180.0 -124.7 20.5 118.4 0 0.0 23 -0.7 0 0.0 0 0.0 7 34
21 A 21 SER S G G > TS+ 0 0 -39.2 -50.3 -179.8 60.9 108.8 33.3 0 0.0 23 -1.7 0 0.0 24 -1.1 6 31
22 A 22 ASP D G G 3 TS+ 0 0 -74.8 41.5 -179.0 71.0 94.8 96.0 0 0.0 0 0.0 0 0.0 0 0.0 5 22
23 A 23 PHE F G G < T + 0 0 -129.1 -30.3 177.4 92.6 64.6 53.5 21 -1.7 0 0.0 20 -0.7 0 0.0 6 37
24 A 24 PHE F S g < TS- 0 0 -66.1 133.1 179.3 -121.4 80.3 121.4 21 -1.1 0 0.0 0 0.0 0 0.0 10 41
25 A 25 PRO P - 0 0 -67.0 179.1 -178.4 -55.0 45.2 94.3 0 0.0 0 0.0 0 0.0 0 0.0 9 32
26 A 26 SER S h > T - 0 0 -58.5 136.4 180.0 -126.0 39.3 102.7 0 0.0 30 -3.2 0 0.0 0 0.0 7 32
27 A 27 VAL V H H > TS+ 0 0 -45.3 -51.1 -179.3 54.0 115.3 21.5 0 0.0 31 -3.6 0 0.0 0 0.0 10 45
28 A 28 ARG R H H > TS+ 0 0 -42.4 -78.6 179.6 45.3 108.4 20.7 0 0.0 32 -3.9 0 0.0 0 0.0 6 33
29 A 29 ASP D H H > TS+ 0 0 -34.3 -49.8 178.4 51.7 113.8 35.3 0 0.0 33 -4.1 0 0.0 0 0.0 8 30
30 A 30 LEU L H H X TS+ 0 0 -54.5 -60.8 179.4 40.0 115.5 9.0 26 -3.2 34 -2.9 0 0.0 0 0.0 13 42
31 A 31 LEU L H H X TS+ 0 0 -51.6 -52.9 179.8 54.4 115.1 17.6 27 -3.6 35 -2.8 0 0.0 0 0.0 10 46
32 A 32 ASP D H H X TS+ 0 0 -47.5 -53.5 -177.9 43.3 111.2 21.4 28 -3.9 36 -1.9 0 0.0 0 0.0 8 32
33 A 33 THR T H H X TS+ 0 0 -66.3 -29.3 179.2 55.0 112.1 32.4 29 -4.1 37 -1.7 0 0.0 0 0.0 9 34
34 A 34 ALA A H H X >TS+ 0 0 -66.2 -52.8 -179.8 41.7 111.6 11.6 30 -2.9 38 -1.4 0 0.0 39 -0.7 10 45
35 A 35 SER S H H X 5TS+ 0 0 -62.9 -26.1 -179.7 62.7 110.4 36.5 31 -2.8 39 -0.6 0 0.0 0 0.0 9 32
36 A 36 ALA A H H < 5TS+ 0 0 -67.2 -39.0 -179.5 11.1 124.4 28.2 32 -1.9 0 0.0 0 0.0 0 0.0 7 25
37 A 37 LEU L H H < 5TS+ 0 0 -129.2 22.7 179.9 30.1 138.0 79.6 33 -1.7 0 0.0 0 0.0 0 0.0 7 31
38 A 38 TYR Y H H X 5TS+ 0 0 -154.8 -3.8 179.3 109.9 75.1 67.2 34 -1.4 42 -3.5 0 0.0 0 0.0 9 39
39 A 39 ARG R H H X TS+ 0 0 -36.6 -78.3 -178.8 34.6 117.5 25.3 0 0.0 44 -2.1 0 0.0 0 0.0 8 24
41 A 41 ALA A H H 4 > TS+ 0 0 -47.1 -61.5 -178.6 55.1 115.4 21.3 0 0.0 44 -1.1 0 0.0 0 0.0 9 30
42 A 42 LEU L H H < 3 TS+ 0 0 -41.0 -45.9 -179.9 42.7 114.9 26.9 38 -3.5 0 0.0 0 0.0 0 0.0 11 35
43 A 43 GLU E H H < 3 TS+ 0 0 -73.3 -28.0 179.0 106.4 94.6 39.8 39 -3.7 0 0.0 0 0.0 0 0.0 7 26
44 A 44 SER S S h < < TS- 0 0 -44.4 164.8 179.7 -123.6 77.3 86.2 40 -2.1 0 0.0 41 -1.1 0 0.0 8 22
45 A 45 PRO P S S S+ 0 0 -105.1 26.8 177.0 75.1 88.4 91.5 0 0.0 0 0.0 0 0.0 0 0.0 5 16
46 A 46 GLU E S S S- 0 0 -139.5 123.6 -180.0 -113.9 89.8 163.2 0 0.0 0 0.0 0 0.0 0 0.0 4 19
47 A 47 HIS H - 0 0 -49.4 132.6 179.6 -163.3 28.8 106.7 0 0.0 0 0.0 0 0.0 0 0.0 8 21
48 A 48 CYS C - 0 0 -96.3 -17.1 179.3 -26.7 63.3 45.3 0 0.0 0 0.0 0 0.0 0 0.0 10 25
49 A 49 SER S h > T - 0 0 177.7 156.8 179.7 -98.1 63.3 154.9 0 0.0 53 -3.1 0 0.0 0 0.0 6 30
50 A 50 PRO P H H > TS+ 0 0 -55.0 -40.2 178.2 54.2 128.9 19.2 0 0.0 54 -3.2 0 0.0 0 0.0 7 36
51 A 51 HIS H H H > TS+ 0 0 -53.9 -56.3 179.4 47.8 108.6 11.5 0 0.0 55 -2.9 0 0.0 0 0.0 11 45
52 A 52 HIS H H H > TS+ 0 0 -47.3 -59.4 179.3 48.8 112.2 18.7 0 0.0 56 -3.2 0 0.0 0 0.0 13 44
53 A 53 THR T H H X TS+ 0 0 -45.3 -60.5 179.6 47.3 113.0 20.6 49 -3.1 57 -2.6 0 0.0 0 0.0 11 35
54 A 54 ALA A H H X TS+ 0 0 -45.8 -61.8 -179.7 48.1 113.2 19.6 50 -3.2 58 -3.3 0 0.0 0 0.0 9 47
55 A 55 LEU L H H X TS+ 0 0 -46.8 -52.4 179.8 52.7 109.9 25.6 51 -2.9 59 -3.5 0 0.0 0 0.0 13 52
56 A 56 ARG R H H X TS+ 0 0 -47.4 -63.0 179.6 43.2 113.8 15.0 52 -3.2 60 -2.9 0 0.0 0 0.0 9 47
57 A 57 GLN Q H H X TS+ 0 0 -51.1 -58.9 179.0 50.5 113.2 17.4 53 -2.6 61 -3.1 0 0.0 0 0.0 8 42
58 A 58 ALA A H H X TS+ 0 0 -48.8 -45.1 178.3 51.8 109.9 24.6 54 -3.3 62 -2.7 0 0.0 0 0.0 11 46
59 A 59 ILE I H H X TS+ 0 0 -53.7 -58.3 -179.8 45.4 112.7 8.0 55 -3.5 63 -2.3 0 0.0 0 0.0 11 48
60 A 60 LEU L H H X TS+ 0 0 -53.2 -41.7 -179.8 55.1 109.5 26.8 56 -2.9 64 -2.2 0 0.0 0 0.0 8 35
61 A 61 CYS C H H X TS+ 0 0 -56.6 -53.0 179.6 50.1 107.1 15.0 57 -3.1 65 -2.1 0 0.0 0 0.0 9 33
62 A 62 TRP W H H X TS+ 0 0 -49.0 -46.9 179.3 57.2 107.5 22.8 58 -2.7 66 -2.1 0 0.0 0 0.0 10 41
63 A 63 GLY G H H X TS+ 0 0 -50.0 -54.7 179.2 50.1 102.9 22.3 59 -2.3 67 -2.2 0 0.0 0 0.0 8 36
64 A 64 GLU E H H X TS+ 0 0 -52.0 -42.2 -179.8 55.1 109.0 24.6 60 -2.2 68 -3.0 0 0.0 0 0.0 8 23
65 A 65 LEU L H H X TS+ 0 0 -55.7 -46.9 -179.8 52.0 105.4 23.2 61 -2.1 69 -2.8 0 0.0 0 0.0 10 32
66 A 66 MET M H H X TS+ 0 0 -59.8 -40.8 179.0 48.7 109.3 30.1 62 -2.1 70 -1.7 0 0.0 0 0.0 10 35
67 A 67 THR T H H X > TS+ 0 0 -66.0 -50.6 179.3 48.2 111.5 10.0 63 -2.2 71 -1.8 0 0.0 70 -1.0 8 26
68 A 68 LEU L H H X 3 TS+ 0 0 -50.4 -40.3 179.8 56.9 109.7 25.5 64 -3.0 72 -1.6 0 0.0 0 0.0 8 29
69 A 69 ALA A H H X 3 TS+ 0 0 -59.4 -37.3 179.3 41.1 111.5 33.1 65 -2.8 73 -1.4 0 0.0 0 0.0 12 32
70 A 70 THR T H H X X TS+ 0 0 -75.9 -70.4 179.4 49.9 111.6 11.1 66 -1.7 74 -1.6 67 -1.0 73 -1.1 9 27
71 A 71 TRP W H H < 3 TS+ 0 0 -39.5 -28.5 178.3 56.6 110.2 41.5 67 -1.8 0 0.0 0 0.0 0 0.0 8 25
72 A 72 VAL V H H X > TS+ 0 0 -70.5 -48.0 179.8 44.9 107.8 16.3 68 -1.6 76 -2.2 0 0.0 75 -1.7 11 26
73 A 73 GLY G H H < < TS+ 0 0 -67.2 -11.8 -179.4 46.5 118.0 49.4 69 -1.4 0 0.0 70 -1.1 0 0.0 10 25
74 A 74 ASN N T h < 3 TS+ 0 0 -112.1 12.6 -177.5 32.4 122.3 76.4 70 -1.6 0 0.0 0 0.0 0 0.0 7 21
75 A 75 ASN N T T 4 < TS+ 0 0 -144.9 -10.6 177.7 87.1 92.1 63.0 72 -1.7 77 -0.7 0 0.0 0 0.0 7 19
76 A 76 LEU L t < T - 0 0 -95.9 119.4 -178.6 -171.0 54.3 152.6 72 -2.2 0 0.0 0 0.0 0 0.0 9 20
77 A 77 GLU E + 0 0 -75.2 -53.1 -178.9 73.5 67.5 15.0 75 -0.7 0 0.0 0 0.0 0 0.0 6 17
78 A 78 ASP D S h > > TS- 0 0 -65.5 108.4 -179.9 -156.1 72.4 118.6 0 0.0 82 -2.4 0 0.0 81 -0.5 6 15
79 A 79 PRO P H H > 3>TS+ 0 0 -47.4 -70.2 179.5 67.7 83.5 17.5 0 0.0 83 -2.8 0 0.0 84 -0.6 8 19
80 A 80 ALA A H H > 35TS+ 0 0 -14.9 -63.3 -179.2 25.4 115.6 47.7 0 0.0 84 -1.0 0 0.0 0 0.0 6 16
81 A 81 SER S H H > <5TS+ 0 0 -81.2 -39.2 177.5 59.1 117.8 30.7 78 -0.5 85 -2.4 0 0.0 0 0.0 8 21
82 A 82 ARG R H H X >5TS+ 0 0 -50.4 -58.4 178.7 42.0 113.2 7.9 78 -2.4 86 -2.8 0 0.0 85 -1.0 13 24
83 A 83 ASP D H H X 35TS+ 0 0 -54.6 -35.7 179.7 63.5 107.4 32.5 79 -2.8 87 -0.6 0 0.0 0 0.0 9 25
84 A 84 LEU L H H X 3TS+ 0 0 -42.4 -46.8 178.5 44.5 115.3 27.1 84 -1.4 93 -1.5 0 0.0 92 -1.5 9 28
89 A 89 VAL V H H < >TS+ 0 0 -59.0 -67.0 -179.0 45.6 115.9 2.1 85 -2.3 94 -1.2 0 0.0 0 0.0 12 31
90 A 90 ASN N H H < 5TS+ 0 0 -54.1 -10.7 -177.4 24.1 128.6 56.2 86 -0.6 0 0.0 0 0.0 0 0.0 11 33
91 A 91 THR T H H X 5TS+ 0 0 -123.7 -56.0 -179.6 29.9 123.6 36.8 87 -2.2 95 -1.4 0 0.0 0 0.0 8 31
92 A 92 ASN N H H X 5TS+ 0 0 -73.7 -57.7 178.9 44.6 123.9 16.6 88 -1.5 96 -1.3 0 0.0 0 0.0 9 30
93 A 93 MET M H H > TS+ 0 0 -44.6 -62.8 179.6 45.6 108.0 19.8 91 -1.4 99 -2.4 0 0.0 98 -0.5 10 40
96 A 96 LYS K H H X 3 TS+ 0 0 -45.5 -63.8 177.7 48.2 113.2 18.7 92 -1.3 100 -2.2 0 0.0 0 0.0 8 47
97 A 97 ILE I H H X 3 TS+ 0 0 -47.1 -31.1 179.7 56.6 111.0 35.2 93 -2.0 101 -2.4 0 0.0 0 0.0 13 49
98 A 98 ARG R H H X < TS+ 0 0 -67.9 -52.7 178.7 46.9 104.9 11.4 94 -2.7 102 -2.1 95 -0.5 0 0.0 13 51
99 A 99 GLN Q H H X > TS+ 0 0 -50.2 -59.8 178.2 49.2 114.8 15.1 95 -2.4 103 -3.0 0 0.0 102 -0.6 9 53
100 A 100 LEU L H H X 3 TS+ 0 0 -44.0 -61.4 -178.9 48.9 108.9 23.1 96 -2.2 104 -2.5 0 0.0 0 0.0 10 63
101 A 101 LEU L H H X 3 TS+ 0 0 -52.9 -33.1 -179.8 46.1 117.1 33.2 97 -2.4 105 -1.9 0 0.0 0 0.0 15 57
102 A 102 TRP W H H X < TS+ 0 0 -74.0 -61.3 -178.6 48.9 109.5 11.3 98 -2.1 106 -3.3 99 -0.6 0 0.0 11 65
103 A 103 PHE F H H X TS+ 0 0 -49.7 -36.7 -179.5 37.3 121.5 33.5 99 -3.0 107 -1.2 0 0.0 0 0.0 9 68
104 A 104 HIS H H H X TS+ 0 0 -83.4 -53.5 179.4 45.1 117.9 17.2 100 -2.5 108 -3.1 0 0.0 0 0.0 12 62
105 A 105 ILE I H H X TS+ 0 0 -53.9 -36.4 -177.8 54.8 114.0 25.7 101 -1.9 109 -1.8 0 0.0 0 0.0 12 56
106 A 106 SER S H H X TS+ 0 0 -64.5 -45.0 179.6 43.4 110.1 23.4 102 -3.3 110 -3.4 0 0.0 0 0.0 11 56
107 A 107 CYS C H H X TS+ 0 0 -65.2 -51.0 -179.9 56.1 109.6 17.3 103 -1.2 111 -1.7 0 0.0 0 0.0 13 45
108 A 108 LEU L H H < TS+ 0 0 -48.4 -34.4 -178.3 39.3 117.5 30.1 104 -3.1 0 0.0 0 0.0 0 0.0 10 45
109 A 109 THR T H H < TS+ 0 0 -87.0 -41.9 -179.1 9.6 136.5 26.6 105 -1.8 0 0.0 0 0.0 0 0.0 7 40
110 A 110 PHE F H H < TS- 0 0 -112.5 -25.9 178.8 -90.9 109.2 43.2 106 -3.4 0 0.0 0 0.0 0 0.0 11 29
111 A 111 GLY G h X T - 0 0 117.5 120.4 -178.4 -100.9 25.4 71.3 107 -1.7 115 -3.1 0 0.0 0 0.0 9 28
112 A 112 ARG R H H > TS+ 0 0 -30.2 -57.3 -178.0 46.0 124.5 34.5 0 0.0 116 -3.9 0 0.0 0 0.0 10 39
113 A 113 GLU E H H > TS+ 0 0 -54.9 -67.1 178.7 44.8 113.9 13.8 0 0.0 117 -3.9 0 0.0 0 0.0 7 32
114 A 114 THR T H H > TS+ 0 0 -40.4 -53.0 -179.7 49.2 116.5 25.1 0 0.0 118 -3.8 0 0.0 0 0.0 9 29
115 A 115 VAL V H H X TS+ 0 0 -54.8 -50.6 -179.3 44.7 113.6 22.0 111 -3.1 119 -2.7 0 0.0 0 0.0 13 43
116 A 116 LEU L H H X TS+ 0 0 -61.4 -50.1 179.8 51.2 112.6 12.2 112 -3.9 120 -2.4 0 0.0 0 0.0 10 44
117 A 117 GLU E H H X TS+ 0 0 -49.5 -47.2 179.7 54.2 108.9 20.0 113 -3.9 121 -3.8 0 0.0 0 0.0 8 33
118 A 118 TYR Y H H X TS+ 0 0 -49.8 -58.9 179.5 52.8 104.3 20.8 114 -3.8 122 -2.1 0 0.0 0 0.0 11 42
119 A 119 LEU L H H X TS+ 0 0 -46.0 -51.6 179.3 40.8 115.5 22.1 115 -2.7 123 -2.6 0 0.0 0 0.0 12 45
120 A 120 VAL V H H X TS+ 0 0 -62.4 -51.4 -179.9 52.8 113.1 12.5 116 -2.4 124 -1.0 0 0.0 0 0.0 10 32
121 A 121 SER S H H X TS+ 0 0 -52.8 -24.0 -177.2 50.3 111.8 43.1 117 -3.8 125 -1.0 0 0.0 0 0.0 9 31
122 A 122 PHE F H H X TS+ 0 0 -83.0 -52.6 179.1 62.9 97.1 18.5 118 -2.1 126 -1.7 0 0.0 0 0.0 12 37
123 A 123 GLY G H H X TS+ 0 0 -31.4 -83.7 177.6 55.6 101.8 30.0 119 -2.6 127 -2.2 0 0.0 0 0.0 10 35
124 A 124 VAL V H H X TS+ 0 0 -9.1 -78.8 -179.3 43.6 109.1 47.8 120 -1.0 128 -0.7 0 0.0 0 0.0 8 29
125 A 125 TRP W H H < > TS+ 0 0 -42.3 -71.1 179.4 45.0 117.7 18.1 121 -1.0 128 -3.5 0 0.0 0 0.0 11 28
126 A 126 ILE I H H < 3 TS+ 0 0 -43.1 -48.6 -178.2 47.5 115.2 30.6 122 -1.7 0 0.0 0 0.0 0 0.0 9 30
127 A 127 ARG R H H < 3 TS+ 0 0 -76.8 4.1 -177.2 112.0 89.6 63.2 123 -2.2 0 0.0 0 0.0 0 0.0 6 26
128 A 128 THR T S h < < TS- 0 0 -83.6 129.8 179.8 -102.3 82.8 131.4 125 -3.5 0 0.0 124 -0.7 0 0.0 8 21
129 A 129 PRO P g > > T - 0 0 -47.2 134.3 -179.7 -120.7 30.9 98.9 0 0.0 132 -2.6 0 0.0 133 -0.9 6 14
130 A 130 PRO P G G 4 > TS+ 0 0 -44.5 -45.0 179.2 73.2 110.4 28.7 0 0.0 133 -0.9 0 0.0 0 0.0 5 14
131 A 131 ALA A G G 4 3 TS+ 0 0 -40.0 -39.4 -177.8 16.0 117.2 34.1 0 0.0 0 0.0 0 0.0 0 0.0 4 13
132 A 132 TYR Y G G 4 < TS+ 0 0 -123.5 8.6 180.0 125.3 87.1 70.3 129 -2.6 0 0.0 0 0.0 0 0.0 6 15
133 A 133 ARG R g < < T - 0 0 -74.5 116.8 179.8 -111.8 66.1 127.5 130 -0.9 0 0.0 129 -0.9 0 0.0 9 17
134 A 134 PRO P - 0 0 -40.3 156.7 -179.4 -117.8 19.6 82.5 0 0.0 0 0.0 0 0.0 0 0.0 6 18
135 A 135 PRO P S S S+ 0 0 -64.3 -55.0 -179.8 48.7 103.4 11.0 0 0.0 0 0.0 0 0.0 0 0.0 4 16
136 A 136 ASN N S S S- 0 0 -86.0 143.6 178.7 -140.9 84.7 128.8 0 0.0 0 0.0 0 0.0 0 0.0 4 20
137 A 137 ALA A - 0 0 -93.3 173.3 179.9 -76.8 39.9 117.5 0 0.0 0 0.0 0 0.0 0 0.0 8 28
138 A 138 PRO P - 0 0 -71.7 154.6 178.7 -163.8 53.7 113.0 0 0.0 0 0.0 0 0.0 0 0.0 8 30
139 A 139 ILE I - 0 0 -146.0 140.6 -179.0 -116.3 18.6 174.4 0 0.0 0 0.0 0 0.0 0 0.0 5 34
140 A 140 LEU L + 0 0 -67.3 148.1 178.1 156.4 41.0 109.3 0 0.0 0 0.0 0 0.0 0 0.0 7 33
141 A 141 SER S 0 0 178.2 116.6 178.8 999.9 999.9 125.8 0 0.0 0 0.0 0 0.0 0 0.0 4 25
142 A 142 THR T 0 0 42.9 999.9 999.9 999.9 999.9 71.6 0 0.0 0 0.0 0 0.0 0 0.0 4 19
1qgtA.pdb
1QGT VIRAL CAPSID PROTEIN MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand TTTTTT HHHHTTS GGGS HHHHHHHHHHHHHHHHHSSS HHHHHHHHHHHHHHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHHHHHHH Kabs/Sand
chirality ---++++-+--++++++--+++---+++++++++++++++++-+----++++++++++++++++++++++++++-+-++++++++++++++++++++++ chirality
bends SSSSSS SSSSSSS SS S SSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSS bends
turns TTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTT turns
5-turns >5555< >5555< >5555< >>555<< 5-turns
3-turns >33X33< >33X>3<<>>3<< >33< >33X3><3< >33<>33< >33<>3 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns >>44<< >>>>XXXXXX<4<<< >>>>XXXXXXXXXXXXXXXXXX>>>XXXXXXX<>XXXXXX 4-turns
summary tTTTTTTthHHHHhGggGGGg hHHHHHHHHHHHHHHHHHhSS hHHHHHHHHHHHHHHHHHHHHHHHHhTt hHHHHHHHHHHHHHHHHHHHHHH summary
sequence MDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYREALESPEHCSPHHTALRQAILCWGELMTLATWVGNNLEDPASRDLVVNYVNTNMGLKIRQL sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand HHHHHHHHHH HHHHHHHHHHHHHHHHS GGG SS Kabs/Sand
chirality +++++++++--++++++++++++++++--+++--+----+ chirality
bends SSSSSSSSSS SSSSSSSSSSSSSSSSS SSS SS bends
turns TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT turns
5-turns 5-turns
3-turns 3< >33<>>3<< 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns XXXXXXX<<>>XXXXXXXXXX<<<<>444< 4-turns
summary HHHHHHHHHHhHHHHHHHHHHHHHHHHhgGGGg SS summary
sequence LWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILST sequence
110 120 130 140