Secondary structure calculation program - copyright by David Keith Smith, 1989
1k0dA.pdb
1K0D GENE REGULATION MOL_ID: 1; MOL_ID: 1;
Sequence length - 221
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 109 GLN Q 0 0 999.9 120.1 -179.7 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 3 25
2 A 110 PRO P - 0 0 -47.2 165.4 178.7 -139.1 999.9 81.2 0 0.0 0 0.0 0 0.0 0 0.0 5 23
3 A 111 LEU L S S S+ 0 0 -100.2 -28.5 179.5 21.8 85.7 46.9 0 0.0 0 0.0 0 0.0 0 0.0 8 19
4 A 112 GLU E S S S+ 0 0 -128.7 -179.2 180.0 42.0 97.7 135.1 0 0.0 0 0.0 0 0.0 0 0.0 7 24
5 A 113 GLY G S e S- 0 0 76.4 -167.6 -179.2 -77.3 81.1 104.5 0 0.0 63 -1.4 0 0.0 64 -0.7 11 34
6 A 114 TYR Y E E AaB - 31 62 -138.2 147.1 178.0 -147.0 22.1 169.7 30 -1.5 32 -1.9 0 0.0 8 -0.5 13 46
7 A 115 THR T E E AaB - 32 61 -115.2 121.0 -179.3 -159.1 18.3 165.0 61 -1.9 61 -2.4 0 0.0 9 -0.5 12 49
8 A 116 LEU L E E AaB - 33 60 -105.5 123.7 177.6 -157.5 4.2 152.0 32 -2.7 34 -3.4 6 -0.5 10 -0.5 13 58
9 A 117 PHE F E E AaB + 34 59 -97.3 128.0 -178.1 128.6 37.9 149.0 59 -3.0 59 -1.3 7 -0.5 0 0.0 13 58
10 A 118 SER S E E Aa - 35 0 -154.5 -163.7 178.5 -105.8 48.3 141.2 34 -1.7 36 -2.8 8 -0.5 0 0.0 14 51
11 A 119 HIS H t > T - 0 0 -140.5 153.1 -179.5 -110.9 30.3 166.1 0 0.0 14 -1.7 0 0.0 0 0.0 10 39
12 A 120 ARG R T T 3 TS+ 0 0 -51.4 -42.7 -179.3 29.1 118.4 30.8 0 0.0 0 0.0 0 0.0 0 0.0 5 31
13 A 121 SER S T T 3 TS+ 0 0 -112.9 35.2 179.7 123.0 87.8 94.6 0 0.0 0 0.0 0 0.0 0 0.0 4 35
14 A 122 ALA A h > X T - 0 0 -100.0 105.6 179.8 -167.3 41.3 145.9 11 -1.7 18 -1.9 0 0.0 17 -0.6 9 45
15 A 123 PRO P H H > 3 TS+ 0 0 -57.6 -35.2 179.8 54.0 90.6 30.3 0 0.0 19 -1.5 0 0.0 0 0.0 8 52
16 A 124 ASN N H H > 3 TS+ 0 0 -68.9 -30.7 178.7 54.2 105.1 35.4 0 0.0 20 -1.0 0 0.0 0 0.0 10 61
17 A 125 GLY G H H > X TS+ 0 0 -68.1 -43.7 -179.9 47.7 108.7 22.2 14 -0.6 21 -1.9 0 0.0 20 -0.5 13 58
18 A 126 PHE F H H X 3 TS+ 0 0 -67.1 -28.7 178.7 66.2 101.0 36.2 14 -1.9 22 -3.0 0 0.0 0 0.0 12 57
19 A 127 LYS K H H X 3 TS+ 0 0 -58.4 -39.8 179.2 42.4 106.6 26.4 15 -1.5 23 -1.6 0 0.0 0 0.0 13 66
20 A 128 VAL V H H X < TS+ 0 0 -73.1 -46.8 179.0 53.2 111.2 21.9 16 -1.0 24 -3.0 17 -0.5 0 0.0 12 69
21 A 129 ALA A H H X TS+ 0 0 -54.4 -42.9 179.9 54.1 108.1 22.8 17 -1.9 25 -2.8 0 0.0 0 0.0 11 66
22 A 130 ILE I H H X TS+ 0 0 -57.0 -52.8 -179.7 41.6 111.6 17.9 18 -3.0 26 -2.9 0 0.0 0 0.0 13 60
23 A 131 VAL V H H X TS+ 0 0 -64.0 -40.1 178.2 53.5 113.4 25.4 19 -1.6 27 -2.2 0 0.0 0 0.0 12 63
24 A 132 LEU L H H < >TS+ 0 0 -59.1 -42.7 -179.3 45.8 112.9 22.6 20 -3.0 29 -1.6 0 0.0 0 0.0 12 59
25 A 133 SER S H H < >5TS+ 0 0 -65.7 -54.0 -179.7 48.9 111.4 14.5 21 -2.8 28 -1.7 0 0.0 0 0.0 13 44
26 A 134 GLU E H H < 35TS+ 0 0 -54.5 -36.8 -178.4 49.6 112.6 33.3 22 -2.9 0 0.0 0 0.0 0 0.0 9 46
27 A 135 LEU L T h < 35TS- 0 0 -82.6 -6.6 178.3 -122.1 111.2 57.1 23 -2.2 0 0.0 0 0.0 0 0.0 9 45
28 A 136 GLY G T T <5T + 0 0 79.0 11.0 179.4 153.8 55.9 53.2 25 -1.7 0 0.0 0 0.0 0 0.0 6 36
29 A 137 PHE F t >T - 0 0 -95.0 101.9 -179.8 -160.6 4.5 143.6 0 0.0 41 -1.3 0 0.0 42 -1.2 9 24
38 A 146 PHE F T T 4 5TS+ 0 0 -60.1 2.4 178.6 76.7 85.6 61.4 36 -1.0 0 0.0 0 0.0 0 0.0 7 25
39 A 147 ASN N T T 4 5TS+ 0 0 -75.3 -59.6 179.3 31.9 101.4 14.6 0 0.0 0 0.0 0 0.0 0 0.0 5 17
40 A 148 LEU L T T 4 5TS- 0 0 -71.7 -14.1 -179.2 -118.9 114.4 50.2 0 0.0 0 0.0 0 0.0 0 0.0 5 15
41 A 149 GLY G T g < >5T + 0 0 75.8 42.0 179.5 163.6 52.9 24.8 37 -1.3 44 -2.0 0 0.0 0 0.0 9 23
42 A 150 GLU E G G > X TS- 0 0 -78.5 129.0 -179.7 -125.8 72.4 128.7 42 -1.7 49 -2.5 0 0.0 48 -1.9 8 25
46 A 154 PRO P H H > 3 TS+ 0 0 -39.9 -44.0 -179.6 55.4 109.8 36.1 0 0.0 50 -1.0 0 0.0 0 0.0 6 17
47 A 155 GLU E H H 4 3 TS+ 0 0 -64.2 -34.0 179.5 40.6 113.1 33.0 0 0.0 0 0.0 0 0.0 0 0.0 6 28
48 A 156 PHE F H H > X TS+ 0 0 -82.8 -37.7 179.0 57.0 109.0 30.4 45 -1.9 52 -2.5 0 0.0 51 -1.5 11 39
49 A 157 VAL V H H < 3 TS+ 0 0 -63.7 -18.9 178.7 60.6 102.1 42.6 45 -2.5 0 0.0 0 0.0 0 0.0 12 29
50 A 158 SER S T h < 3 TS+ 0 0 -78.1 -21.8 179.2 44.8 106.7 44.3 46 -1.0 0 0.0 0 0.0 0 0.0 7 26
51 A 159 VAL V T T 4 < TS+ 0 0 -85.4 -45.5 178.9 17.1 132.5 28.5 48 -1.5 0 0.0 0 0.0 0 0.0 12 39
52 A 160 ASN N t < > T - 0 0 -131.6 104.4 179.9 -164.1 62.9 156.0 48 -2.5 55 -2.5 0 0.0 0 0.0 12 37
53 A 161 PRO P T T 3 TS+ 0 0 -59.9 -16.7 179.9 62.7 93.7 45.5 0 0.0 0 0.0 0 0.0 0 0.0 6 26
54 A 162 ASN N T T 3 TS- 0 0 -84.5 -7.6 179.2 -136.2 102.6 57.6 0 0.0 0 0.0 0 0.0 0 0.0 5 28
55 A 163 ALA A t < T + 0 0 53.7 43.5 179.6 116.3 63.0 28.7 52 -2.5 0 0.0 0 0.0 0 0.0 9 37
56 A 164 ARG R - 0 0 -134.3 166.3 177.9 -75.8 60.2 150.1 0 0.0 0 0.0 0 0.0 0 0.0 7 49
57 A 165 VAL V S S S+ 0 0 -111.6 150.7 0.4 54.0 90.1 151.2 0 0.0 0 0.0 0 0.0 0 0.0 12 53
58 A 166 PRO P e + 0 0 -82.7 163.4 176.6 155.5 60.4 63.5 0 0.0 72 -1.3 0 0.0 0 0.0 13 60
59 A 167 ALA A E E ABC - 9 71 -143.7 139.4 -179.4 -158.1 22.0 166.5 9 -1.3 9 -3.0 0 0.0 0 0.0 16 56
60 A 168 LEU L E E ABC - 8 70 -128.7 139.0 177.5 -153.2 8.5 169.1 70 -3.2 70 -3.1 0 0.0 62 -0.6 13 64
61 A 169 ILE I E E ABC - 7 69 -111.1 119.8 179.0 -156.7 6.4 161.3 7 -2.4 7 -1.9 0 0.0 63 -1.0 12 51
62 A 170 ASP D E E ABC >T - 6 68 -95.6 98.0 -177.9 -174.5 11.5 146.0 68 -3.1 68 -1.6 60 -0.6 67 -0.6 14 45
63 A 171 HIS H T e > >5TS+ 0 0 -62.8 -41.8 179.5 58.5 78.6 29.5 5 -1.4 67 -0.9 61 -1.0 66 -0.7 14 31
64 A 172 GLY G T T 4 35TS+ 0 0 -60.4 -27.0 179.9 61.1 100.8 37.3 5 -0.7 66 -0.6 0 0.0 0 0.0 9 26
65 A 173 MET M T T 4 >5TS- 0 0 -98.4 54.4 179.3 -81.4 135.6 110.4 0 0.0 68 -0.7 0 0.0 0 0.0 6 26
66 A 174 ASP D T T 4 <5TS- 0 0 53.6 36.6 179.0 -59.2 86.7 33.9 63 -0.7 0 0.0 64 -0.6 0 0.0 7 18
67 A 175 ASN N T T < 3 > TS- 0 0 83.2 113.9 -178.2 -118.5 76.2 48.1 58 -1.3 76 -2.3 0 0.0 75 -0.5 9 48
73 A 181 SER S H H > 3 TS+ 0 0 -49.4 -41.8 -179.8 55.3 111.9 32.4 0 0.0 77 -2.6 0 0.0 0 0.0 13 61
74 A 182 GLY G H H > 3 TS+ 0 0 -60.8 -44.2 179.8 43.7 110.2 25.3 0 0.0 78 -1.9 0 0.0 0 0.0 9 56
75 A 183 ALA A H H > < TS+ 0 0 -69.5 -35.1 -179.6 54.9 112.2 31.5 72 -0.5 79 -2.3 0 0.0 0 0.0 9 48
76 A 184 ILE I H H X TS+ 0 0 -65.7 -42.3 179.4 48.6 107.8 22.6 72 -2.3 80 -2.2 0 0.0 0 0.0 13 56
77 A 185 LEU L H H X TS+ 0 0 -64.3 -41.7 179.8 48.9 111.7 25.2 73 -2.6 81 -2.1 0 0.0 0 0.0 11 64
78 A 186 LEU L H H X TS+ 0 0 -65.6 -38.7 178.7 52.6 109.8 26.4 74 -1.9 82 -1.9 0 0.0 0 0.0 8 54
79 A 187 HIS H H H X TS+ 0 0 -60.9 -47.8 -179.3 48.3 110.2 18.5 75 -2.3 83 -2.9 0 0.0 0 0.0 8 50
80 A 188 LEU L H H X TS+ 0 0 -61.3 -46.4 -179.3 42.6 114.3 24.9 76 -2.2 84 -2.5 0 0.0 0 0.0 10 60
81 A 189 VAL V H H X TS+ 0 0 -72.5 -29.0 177.9 51.0 115.6 36.0 77 -2.1 85 -2.0 0 0.0 0 0.0 13 52
82 A 190 ASN N H H X TS+ 0 0 -69.4 -49.2 -179.7 44.0 113.7 17.0 78 -1.9 86 -2.0 0 0.0 0 0.0 9 41
83 A 191 LYS K H H X TS+ 0 0 -61.3 -42.1 -179.5 50.2 114.1 26.5 79 -2.9 87 -2.1 0 0.0 0 0.0 8 40
84 A 192 TYR Y H H X TS+ 0 0 -62.8 -46.3 179.9 47.6 111.4 23.1 80 -2.5 88 -2.7 0 0.0 0 0.0 13 35
85 A 193 TYR Y H H X TS+ 0 0 -63.1 -36.5 -179.8 51.7 111.5 31.5 81 -2.0 89 -2.0 0 0.0 0 0.0 11 30
86 A 194 LYS K H H < TS+ 0 0 -68.2 -39.0 -179.1 42.5 114.7 29.8 82 -2.0 0 0.0 0 0.0 0 0.0 8 22
87 A 195 GLU E H H < TS+ 0 0 -76.8 -40.2 -176.3 22.5 129.4 26.0 83 -2.1 0 0.0 0 0.0 0 0.0 6 21
88 A 196 THR T H H < TS- 0 0 -102.8 -24.9 -178.1 -128.5 87.5 44.8 84 -2.7 0 0.0 0 0.0 0 0.0 7 19
89 A 197 GLY G S h < TS+ 0 0 87.7 -3.8 179.9 111.8 78.2 66.7 85 -2.0 0 0.0 0 0.0 0 0.0 7 18
90 A 198 ASN N - 0 0 -106.2 116.2 -179.4 -144.8 65.4 155.6 0 0.0 92 -2.2 0 0.0 0 0.0 7 23
91 A 199 PRO P t > T - 0 0 -79.1 58.2 -179.3 -175.1 27.6 105.0 0 0.0 94 -2.3 0 0.0 0 0.0 12 37
92 A 200 LEU L T T 3 TS- 0 0 -56.9 129.5 179.7 -3.6 72.0 106.5 90 -2.2 0 0.0 0 0.0 0 0.0 10 43
93 A 201 LEU L T T 3 TS+ 0 0 60.5 19.0 -176.1 58.5 137.1 48.8 0 0.0 178 -2.2 0 0.0 0 0.0 9 59
94 A 202 TRP W S t < TS- 0 0 -146.1 -149.7 178.8 -117.4 81.1 119.1 91 -2.3 0 0.0 0 0.0 0 0.0 10 51
95 A 203 SER S - 0 0 -164.6 152.3 179.5 -141.9 9.3 164.9 0 0.0 0 0.0 0 0.0 0 0.0 9 43
96 A 204 ASP D S S S+ 0 0 -100.1 5.9 179.8 95.1 79.3 72.0 0 0.0 98 -0.5 0 0.0 0 0.0 7 31
97 A 205 ASP D S h > TS- 0 0 -103.7 123.0 -178.7 -144.0 70.4 152.3 0 0.0 101 -2.4 0 0.0 0 0.0 6 25
98 A 206 LEU L H H > TS+ 0 0 -48.3 -48.5 179.5 52.0 101.1 28.9 96 -0.5 102 -1.9 0 0.0 0 0.0 7 19
99 A 207 ALA A H H > TS+ 0 0 -55.7 -51.7 179.6 47.6 110.6 19.6 0 0.0 103 -1.4 0 0.0 0 0.0 6 18
100 A 208 ASP D H H > TS+ 0 0 -57.9 -41.8 -179.8 55.2 108.3 28.8 0 0.0 104 -2.5 0 0.0 0 0.0 11 31
101 A 209 GLN Q H H X TS+ 0 0 -61.2 -37.2 -179.9 54.3 104.1 28.4 97 -2.4 105 -2.9 0 0.0 0 0.0 11 38
102 A 210 SER S H H X TS+ 0 0 -65.9 -34.7 179.5 47.2 110.0 30.3 98 -1.9 106 -1.9 0 0.0 0 0.0 8 27
103 A 211 GLN Q H H X TS+ 0 0 -72.9 -40.6 178.9 50.4 111.5 25.0 99 -1.4 107 -2.2 0 0.0 0 0.0 9 35
104 A 212 ILE I H H X TS+ 0 0 -60.9 -49.9 179.1 47.2 112.2 15.8 100 -2.5 108 -2.6 0 0.0 0 0.0 14 44
105 A 213 ASN N H H X TS+ 0 0 -58.9 -39.3 179.1 58.4 107.2 27.7 101 -2.9 109 -3.3 0 0.0 0 0.0 9 42
106 A 214 ALA A H H X TS+ 0 0 -54.3 -56.5 179.5 39.1 112.0 12.7 102 -1.9 110 -2.3 0 0.0 0 0.0 8 38
107 A 215 TRP W H H X TS+ 0 0 -61.7 -35.6 -179.8 54.9 115.4 30.3 103 -2.2 111 -2.6 0 0.0 0 0.0 10 48
108 A 216 LEU L H H X TS+ 0 0 -65.2 -49.5 178.6 41.7 111.2 19.3 104 -2.6 112 -2.4 0 0.0 0 0.0 12 51
109 A 217 PHE F H H X TS+ 0 0 -66.1 -32.5 179.0 56.3 113.3 30.2 105 -3.3 113 -2.4 0 0.0 0 0.0 10 38
110 A 218 PHE F H H X >TS+ 0 0 -63.5 -44.1 -179.9 44.9 109.7 20.9 106 -2.3 114 -2.3 0 0.0 115 -0.9 9 43
111 A 219 GLN Q H H X >TS+ 0 0 -65.0 -48.9 -178.4 41.4 118.6 17.8 107 -2.6 116 -2.7 0 0.0 115 -1.1 11 53
112 A 220 THR T H H < 5TS+ 0 0 -71.4 -28.3 -178.0 32.7 125.9 39.0 108 -2.4 0 0.0 0 0.0 0 0.0 11 48
113 A 221 SER S H H < 5TS+ 0 0 -101.9 -27.9 -178.8 20.4 133.8 40.8 109 -2.4 0 0.0 0 0.0 0 0.0 8 31
114 A 222 GLY G H H < 5TS+ 0 0 -117.3 -13.0 -179.1 39.5 127.2 54.8 110 -2.3 0 0.0 0 0.0 0 0.0 10 38
115 A 223 HIS H T h X TS+ 0 0 -64.9 -41.6 -179.3 48.0 111.9 22.7 0 0.0 121 -2.0 0 0.0 0 0.0 9 45
118 A 226 MET M H H > TS+ 0 0 -66.2 -41.4 177.8 47.6 112.0 27.6 0 0.0 122 -2.3 0 0.0 0 0.0 12 43
119 A 227 ILE I H H X TS+ 0 0 -64.6 -41.3 179.6 55.5 110.9 21.7 115 -2.3 123 -2.5 0 0.0 0 0.0 13 50
120 A 228 GLY G H H X TS+ 0 0 -57.4 -41.7 -179.2 43.4 109.9 26.7 116 -2.2 124 -1.7 0 0.0 0 0.0 8 46
121 A 229 GLN Q H H X TS+ 0 0 -74.4 -34.9 179.1 55.5 110.1 30.2 117 -2.0 125 -2.2 0 0.0 0 0.0 10 40
122 A 230 ALA A H H X TS+ 0 0 -60.9 -43.8 -179.9 47.2 110.4 19.6 118 -2.3 126 -1.3 0 0.0 0 0.0 15 42
123 A 231 LEU L H H X >TS+ 0 0 -63.8 -41.4 -179.5 53.2 109.9 28.6 119 -2.5 127 -2.7 0 0.0 128 -0.6 12 43
124 A 232 HIS H H H X >TS+ 0 0 -61.9 -51.2 -179.1 39.0 113.6 21.0 120 -1.7 128 -1.7 0 0.0 129 -1.3 9 31
125 A 233 PHE F H H < 5TS+ 0 0 -73.6 -19.3 179.8 51.2 118.9 43.9 121 -2.2 0 0.0 0 0.0 0 0.0 13 31
126 A 234 ARG R H H < 5TS+ 0 0 -83.5 -38.6 -177.3 3.9 132.8 29.6 122 -1.3 0 0.0 0 0.0 0 0.0 10 32
127 A 235 TYR Y H H < 5TS+ 0 0 -121.1 -28.9 -175.8 30.8 132.0 43.7 123 -2.7 0 0.0 0 0.0 0 0.0 6 27
128 A 236 PHE F T h < > T - 0 0 -133.7 107.6 -178.5 -165.4 22.5 155.8 131 -0.7 137 -1.8 0 0.0 136 -0.8 7 20
134 A 242 ALA A H H > 3 TS+ 0 0 -57.2 -42.9 -179.1 58.3 88.8 30.1 0 0.0 138 -3.2 0 0.0 0 0.0 6 23
135 A 243 SER S H H > 3 TS+ 0 0 -61.0 -30.0 179.2 49.6 106.4 35.7 0 0.0 139 -1.8 0 0.0 0 0.0 6 21
136 A 244 ALA A H H > < TS+ 0 0 -73.5 -44.5 179.1 46.3 113.0 22.1 133 -0.8 140 -1.7 0 0.0 0 0.0 9 28
137 A 245 VAL V H H X TS+ 0 0 -60.8 -49.2 -179.1 48.4 113.7 19.0 133 -1.8 141 -2.7 0 0.0 0 0.0 13 33
138 A 246 GLU E H H X TS+ 0 0 -59.1 -44.2 179.3 59.3 105.3 26.3 134 -3.2 142 -3.1 0 0.0 0 0.0 9 30
139 A 247 ARG R H H X TS+ 0 0 -50.6 -51.2 -178.4 34.3 114.9 22.5 135 -1.8 143 -1.6 0 0.0 0 0.0 9 30
140 A 248 TYR Y H H X TS+ 0 0 -77.4 -35.6 178.2 53.2 116.1 30.3 136 -1.7 144 -2.4 0 0.0 0 0.0 12 39
141 A 249 THR T H H X TS+ 0 0 -64.7 -41.7 178.0 49.5 110.7 23.7 137 -2.7 145 -2.1 0 0.0 0 0.0 12 42
142 A 250 ASP D H H X TS+ 0 0 -61.5 -44.5 -179.4 50.1 110.7 23.4 138 -3.1 146 -1.8 0 0.0 0 0.0 8 37
143 A 251 GLU E H H X TS+ 0 0 -62.7 -40.3 179.4 52.0 108.4 26.4 139 -1.6 147 -2.4 0 0.0 0 0.0 9 34
144 A 252 VAL V H H X TS+ 0 0 -62.5 -44.3 179.6 48.7 109.9 21.7 140 -2.4 148 -2.6 0 0.0 0 0.0 11 49
145 A 253 ARG R H H X TS+ 0 0 -64.9 -31.0 179.2 52.8 110.0 33.8 141 -2.1 149 -1.6 0 0.0 0 0.0 9 48
146 A 254 ARG R H H X TS+ 0 0 -69.2 -41.9 179.4 50.5 108.2 23.8 142 -1.8 150 -1.5 0 0.0 0 0.0 8 36
147 A 255 VAL V H H X > TS+ 0 0 -60.9 -47.9 178.6 48.3 110.5 20.0 143 -2.4 151 -1.7 0 0.0 150 -0.5 10 47
148 A 256 TYR Y H H X 3 TS+ 0 0 -62.1 -30.9 178.7 60.6 105.3 32.3 144 -2.6 152 -3.4 0 0.0 0 0.0 10 55
149 A 257 GLY G H H X 3 TS+ 0 0 -61.6 -37.9 179.5 49.7 103.9 27.2 145 -1.6 153 -2.3 0 0.0 0 0.0 9 39
150 A 258 VAL V H H X < TS+ 0 0 -67.7 -40.3 179.6 43.1 114.8 28.0 146 -1.5 154 -1.8 147 -0.5 0 0.0 8 38
151 A 259 VAL V H H X TS+ 0 0 -69.6 -50.8 179.6 52.5 112.7 16.3 147 -1.7 155 -3.0 0 0.0 0 0.0 9 51
152 A 260 GLU E H H X TS+ 0 0 -48.8 -52.6 179.9 46.8 111.5 22.5 148 -3.4 156 -2.7 0 0.0 0 0.0 12 44
153 A 261 MET M H H X TS+ 0 0 -59.6 -44.1 179.4 51.2 111.3 25.1 149 -2.3 157 -2.2 0 0.0 0 0.0 8 30
154 A 262 ALA A H H X TS+ 0 0 -60.5 -45.3 179.5 45.0 113.3 22.2 150 -1.8 158 -1.7 0 0.0 0 0.0 9 40
155 A 263 LEU L H H X TS+ 0 0 -66.8 -37.9 179.6 55.0 110.1 28.5 151 -3.0 159 -2.5 0 0.0 0 0.0 13 47
156 A 264 ALA A H H X TS+ 0 0 -62.6 -40.6 179.3 48.4 108.5 25.0 152 -2.7 160 -2.9 0 0.0 0 0.0 9 34
157 A 265 GLU E H H X TS+ 0 0 -66.6 -37.2 180.0 49.0 111.6 29.2 153 -2.2 161 -1.6 0 0.0 0 0.0 8 29
158 A 266 ARG R H H X TS+ 0 0 -68.8 -37.2 178.7 49.7 112.1 27.9 154 -1.7 162 -1.7 0 0.0 0 0.0 11 33
159 A 267 ARG R H H X TS+ 0 0 -63.0 -50.1 179.5 55.8 106.4 18.4 155 -2.5 163 -2.2 0 0.0 0 0.0 9 31
160 A 268 GLU E H H X TS+ 0 0 -50.1 -41.5 179.9 49.0 107.8 31.4 156 -2.9 164 -0.7 0 0.0 0 0.0 8 22
161 A 269 ALA A H H < > TS+ 0 0 -69.5 -39.8 179.6 54.2 106.9 27.9 157 -1.6 164 -0.8 0 0.0 0 0.0 7 23
162 A 270 LEU L H H < 3 TS+ 0 0 -60.9 -39.3 -179.9 58.7 102.6 26.2 158 -1.7 0 0.0 0 0.0 0 0.0 6 22
163 A 271 VAL V H H < 3 T 0 0 -61.0 -26.8 179.4 999.9 999.9 39.1 159 -2.2 0 0.0 0 0.0 0 0.0 6 17
164!A 272 MET M h < < T 0 0 -120.3 999.9 999.9 999.9 999.9 86.9 161 -0.8 0 0.0 160 -0.7 0 0.0 4 13
165!A 295 PHE F 0 0 999.9 28.3 -179.1 999.9 999.9 999.9 0 0.0 167 -1.7 0 0.0 0 0.0 3 17
166 A 296 ASP D + 0 0 -74.3 86.2 -179.6 127.0 999.9 121.1 0 0.0 0 0.0 0 0.0 0 0.0 3 21
167 A 297 TYR Y - 0 0 -142.2 145.5 179.6 -106.6 61.9 173.6 165 -1.7 0 0.0 0 0.0 0 0.0 4 30
168 A 298 PRO P - 0 0 -72.5 148.8 179.5 -153.7 31.4 115.5 0 0.0 0 0.0 0 0.0 0 0.0 7 38
169 A 299 VAL V - 0 0 -123.0 141.7 -179.1 -158.3 7.9 163.9 0 0.0 0 0.0 0 0.0 0 0.0 10 42
170 A 300 TRP W - 0 0 -123.2 156.8 -179.2 -121.9 25.7 149.8 0 0.0 0 0.0 0 0.0 0 0.0 13 52
171 A 301 LEU L S S S+ 0 0 -61.0 -42.3 -178.6 30.4 94.8 28.1 0 0.0 0 0.0 0 0.0 0 0.0 14 57
172 A 302 VAL V S t > TS- 0 0 -129.8 138.0 177.9 -13.1 124.2 165.9 0 0.0 175 -1.3 0 0.0 0 0.0 11 48
173 A 303 GLY G T T 3 TS- 0 0 51.3 36.1 179.4 -82.0 102.6 39.8 0 0.0 0 0.0 0 0.0 0 0.0 6 36
174 A 304 ASP D T T 3 TS+ 0 0 39.3 44.3 178.7 95.5 107.8 33.3 0 0.0 0 0.0 0 0.0 0 0.0 7 39
175 A 305 LYS K S t < TS- 0 0 -158.8 148.5 -179.9 -91.5 85.3 167.6 172 -1.3 0 0.0 0 0.0 0 0.0 9 38
176 A 306 LEU L + 0 0 -64.0 129.6 179.0 164.4 53.5 114.5 0 0.0 0 0.0 0 0.0 0 0.0 11 52
177 A 307 THR T h > > T - 0 0 -138.6 175.4 179.9 -91.1 56.5 147.8 0 0.0 181 -1.9 0 0.0 180 -1.2 12 61
178 A 308 ILE I H H > 3 TS+ 0 0 -63.2 -16.2 178.6 70.6 120.7 45.2 93 -2.2 182 -1.7 0 0.0 0 0.0 12 67
179 A 309 ALA A H H 4 3 TS+ 0 0 -65.4 -40.2 -179.3 36.9 105.7 25.1 0 0.0 0 0.0 0 0.0 0 0.0 13 65
180 A 310 ASP D H H > X TS+ 0 0 -76.7 -50.1 -178.6 51.3 115.6 20.1 177 -1.2 183 -1.4 0 0.0 184 -0.8 10 71
181 A 311 LEU L H H < 3 TS+ 0 0 -59.6 -31.5 179.7 71.7 95.7 37.4 177 -1.9 0 0.0 0 0.0 0 0.0 13 71
182 A 312 ALA A T h < 3 TS+ 0 0 -56.5 -29.2 -179.6 47.1 99.9 39.1 178 -1.7 0 0.0 0 0.0 0 0.0 10 70
183 A 313 PHE F T h > X TS+ 0 0 -84.2 -29.4 -177.4 84.9 90.3 38.8 180 -1.4 187 -2.4 0 0.0 186 -0.9 9 73
184 A 314 VAL V H H X 3 TS+ 0 0 -40.6 -60.6 -179.4 46.7 88.0 31.4 180 -0.8 188 -1.4 0 0.0 0 0.0 12 65
185 A 315 PRO P H H 4 3 TS+ 0 0 -57.7 -31.1 -179.0 44.0 117.9 35.8 0 0.0 0 0.0 0 0.0 0 0.0 12 57
186 A 316 TRP W H H > X TS+ 0 0 -84.5 -32.5 178.3 61.5 103.3 34.6 183 -0.9 189 -2.0 0 0.0 190 -1.1 10 61
187 A 317 ASN N H H < 3 TS+ 0 0 -58.6 -34.2 -178.7 60.8 100.3 30.4 183 -2.4 0 0.0 0 0.0 0 0.0 9 62
188 A 318 ASN N T h < 3 TS+ 0 0 -73.0 -2.8 -178.4 42.4 107.4 62.4 184 -1.4 0 0.0 0 0.0 0 0.0 7 47
189 A 319 VAL V T g 4 X TS+ 0 0 -119.8 -14.6 -178.7 89.0 83.5 54.5 186 -2.0 192 -2.2 0 0.0 0 0.0 8 46
190 A 320 VAL V G G < >>TS+ 0 0 -61.7 -13.7 178.2 75.4 74.0 49.2 186 -1.1 195 -2.1 0 0.0 193 -1.6 11 51
191 A 321 ASP D G G >5TS+ 0 0 -66.3 -26.0 178.7 66.5 85.5 35.0 0 0.0 194 -1.6 0 0.0 0 0.0 9 36
192 A 322 ARG R G G <5TS+ 0 0 -68.5 -13.7 178.0 45.6 102.4 51.2 189 -2.2 0 0.0 0 0.0 0 0.0 7 34
193 A 323 ILE I G G <5TS- 0 0 -115.0 20.8 177.4 -93.6 128.9 84.4 190 -1.6 0 0.0 0 0.0 0 0.0 10 40
194 A 324 GLY G T g <5TS+ 0 0 82.2 16.7 179.4 136.6 79.3 49.7 191 -1.6 196 -0.6 0 0.0 0 0.0 6 37
195 A 325 ILE I t T - 0 0 -102.1 97.6 -178.5 -174.5 5.3 145.6 194 -0.6 200 -3.2 0 0.0 0 0.0 9 32
197 A 327 ILE I H H > TS+ 0 0 -57.1 -45.6 -179.4 59.1 80.8 26.0 195 -0.9 201 -2.2 0 0.0 0 0.0 11 42
198 A 328 LYS K H H 4 TS+ 0 0 -52.5 -41.6 -178.9 28.1 120.0 29.4 0 0.0 0 0.0 0 0.0 0 0.0 8 29
199 A 329 ILE I H H 4 TS+ 0 0 -87.9 -50.5 -178.0 38.8 127.7 23.3 0 0.0 0 0.0 0 0.0 0 0.0 6 22
200 A 330 GLU E H H < TS+ 0 0 -72.8 -37.8 -178.8 27.6 126.5 31.1 196 -3.2 0 0.0 0 0.0 0 0.0 7 32
201 A 331 PHE F h X T + 0 0 -132.2 83.2 -179.6 176.2 62.4 131.8 197 -2.2 205 -2.3 0 0.0 0 0.0 12 35
202 A 332 PRO P H H > TS+ 0 0 -48.8 -52.1 -180.0 47.4 82.6 30.0 0 0.0 206 -2.0 0 0.0 0 0.0 10 34
203 A 333 GLU E H H > TS+ 0 0 -62.5 -40.3 179.4 49.9 112.2 26.8 0 0.0 207 -2.6 0 0.0 0 0.0 9 44
204 A 334 VAL V H H > TS+ 0 0 -64.0 -38.7 179.6 57.3 107.2 25.5 0 0.0 208 -3.3 0 0.0 0 0.0 13 54
205 A 335 TYR Y H H X TS+ 0 0 -55.9 -50.7 179.9 39.8 111.5 20.6 201 -2.3 209 -1.7 0 0.0 0 0.0 10 46
206 A 336 LYS K H H X TS+ 0 0 -64.1 -46.6 179.7 53.4 115.1 22.1 202 -2.0 210 -2.8 0 0.0 0 0.0 9 41
207 A 337 TRP W H H X TS+ 0 0 -54.4 -51.8 -179.5 42.4 112.7 21.3 203 -2.6 211 -1.8 0 0.0 0 0.0 11 53
208 A 338 THR T H H X TS+ 0 0 -69.1 -27.4 179.2 55.6 112.8 35.0 204 -3.3 212 -2.6 0 0.0 0 0.0 10 52
209 A 339 LYS K H H X TS+ 0 0 -70.8 -42.2 178.3 51.0 105.0 25.6 205 -1.7 213 -1.1 0 0.0 0 0.0 8 40
210 A 340 HIS H H H < TS+ 0 0 -60.1 -42.1 -179.5 44.7 114.8 23.1 206 -2.8 0 0.0 0 0.0 0 0.0 9 38
211 A 341 MET M H H < > TS+ 0 0 -69.0 -42.1 -179.6 55.4 108.7 25.3 207 -1.8 214 -1.5 0 0.0 0 0.0 10 47
212 A 342 MET M H H < 3 TS+ 0 0 -65.9 -17.4 179.5 57.1 103.6 48.4 208 -2.6 0 0.0 0 0.0 0 0.0 9 43
213 A 343 ARG R T h < 3 TS+ 0 0 -91.5 -5.9 179.7 111.3 78.6 59.1 209 -1.1 0 0.0 0 0.0 0 0.0 8 27
214 A 344 ARG R h > < T - 0 0 -70.4 133.7 -179.8 -136.1 69.3 120.8 211 -1.5 218 -2.4 0 0.0 0 0.0 8 34
215 A 345 PRO P H H > TS+ 0 0 -57.3 -41.7 179.5 52.7 104.3 28.5 0 0.0 219 -2.7 0 0.0 0 0.0 6 24
216 A 346 ALA A H H > TS+ 0 0 -63.0 -38.2 179.9 47.1 111.6 26.9 0 0.0 220 -2.2 0 0.0 0 0.0 9 34
217 A 347 VAL V H H > TS+ 0 0 -69.6 -42.4 178.9 50.4 111.2 25.5 0 0.0 221 -2.3 0 0.0 0 0.0 13 42
218 A 348 ILE I H H < TS+ 0 0 -58.6 -50.9 -179.6 48.9 111.8 17.6 214 -2.4 0 0.0 0 0.0 0 0.0 9 29
219 A 349 LYS K H H < TS+ 0 0 -55.2 -50.9 -179.4 49.0 111.0 22.0 215 -2.7 0 0.0 0 0.0 0 0.0 7 29
220 A 350 ALA A H H < T 0 0 -58.0 -45.6 -179.9 999.9 999.9 24.8 216 -2.2 0 0.0 0 0.0 0 0.0 9 42
221 A 351 LEU L h < T 0 0 -74.4 999.9 999.9 999.9 999.9 69.1 217 -2.3 0 0.0 0 0.0 0 0.0 7 43
1k0dA.pdb
1K0D GENE REGULATION MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand SSSEEEEE TT HHHHHHHHHHHHTT EEEEE TTTTGGGSHHHHTT TT S EEEETTTTTEEEESHHHHHHHHHHHHHHHHS TTS SSHHH Kabs/Sand
chirality -++----+--++-++++++++++++-+-+-------++-++++-++++++-+-+-++----++------+-+++++++++++++++-+---+--+-+++ chirality
bends SSS SS SSSSSSSSSSSSS SSS SSSSSSSSSS SS S SSSSS SSSSSSSSSSSSSSSSSS SSS SSSSS bends
turns TTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTT TTTTTTT TTTTTTTTTTTTTTTTTT TTTT TTTT turns
5-turns >5555< >5555< >5555< 5-turns
3-turns >33X33X33< >33< >>333< >3><3< >33< >33< 3-turns
bridge-2 BBBB CCCC bridge-2
bridge-1 aaaaa aaaaa BBBB CCCC bridge-1
sheets AAAAA AAAAA AAAA AAAA sheets
4-turns >>>>XXXXXX<<<< >444< >>4><<4< >444< >>>>XXXXXXXXXX<<<< >>>> 4-turns
summary SSeEEEEEtTThHHHHHHHHHHHHhTteEEEEEetTTTgGGGhHHHHhTtTTt SeEEEEeTTTTEEEEhHHHHHHHHHHHHHHHHh tTTt ShHHH summary
sequence QPLEGYTLFSHRSAPNGFKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIWESGAILLHLVNKYYKETGNPLLWSDDLAD sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand HHHHHHHHHHHHHHTHHHHHHHHHHHHT SS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTTS HHHHTTHHHHTTGGGGT HHHH Kabs/Sand
chirality ++++++++++++++++++++++++++++-+-+-+++++++++++++++++++++++++++++ +----+--+-+-+++++++++++++++-+--++++ chirality
bends SSSSSSSSSSSSSSSSSSSSSSSSSSSS SS SSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSS SSSSSSSSSSSSSSSSS SSSS bends
turns TTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT TTTTTTTTTTTTTTTTTTTTTTTT turns
5-turns >>555<< >>555<< >5555< 5-turns
3-turns >33< >33< >33< >33< >33X33X33X33X>><<< 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns XXXXXXXXXXX<<>>XXXXXX<<<< >>>>XXXXXXXXXXXXXXXXXXXXXXXX<<<< >>4><<>X4><<4< >>44< 4-turns
summary HHHHHHHHHHHHHHhHHHHHHHHHHHHhtSS hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh StTTt hHHHHhhHHHHhgGGGGgthHHHH summary
sequence QSQINAWLFFQTSGHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVMFDYPVWLVGDKLTIADLAFVPWNNVVDRIGINIKIE sequence
110 120 130 140 150 160 170 180 190 200
author author
Kabs/Sand HHHHHHHHHHHT HHHHHH Kabs/Sand
chirality +++++++++++++-+++++ chirality
bends SSSSSSSSSSSS SSSSS bends
turns TTTTTTTTTTTTTTTTTTTTT turns
5-turns 5-turns
3-turns >33< 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns X>>>XXXXX<<<<>>>><<<< 4-turns
summary hHHHHHHHHHHHhhHHHHHHh summary
sequence FPEVYKWTKHMMRRPAVIKAL sequence
210 220
Messages
chain break between 164(A 272 ) and 165(A 295 )