Secondary structure calculation program - copyright by David Keith Smith, 1989
1jfmA.pdb
1JFM IMMUNE SYSTEM MOL_ID: 1; MOL_ID: 1;
Sequence length - 174
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 1 ASP D 0 0 999.9 163.7 179.6 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 2 17
2 A 2 ALA A - 0 0 163.6 -156.0 179.3 -88.3 999.9 174.4 0 0.0 0 0.0 0 0.0 0 0.0 4 27
3 A 3 HIS H e - 0 0 -148.6 165.6 179.2 -140.9 25.0 155.4 0 0.0 100 -0.7 0 0.0 0 0.0 9 33
4 A 4 SER S E E AA - 99 0 -130.7 157.8 178.3 -103.2 30.2 150.9 0 0.0 6 -0.6 0 0.0 29 -0.6 11 46
5 A 5 LEU L E E AAB - 98 28 -84.8 120.3 -179.6 -165.1 42.8 141.5 98 -3.3 98 -3.1 0 0.0 0 0.0 13 57
6 A 6 ARG R E E AAB - 97 27 -113.6 129.0 178.1 -169.3 8.0 159.6 27 -2.7 27 -2.3 4 -0.6 0 0.0 11 50
7 A 7 CYS C E E AAB - 96 26 -115.4 145.4 -178.8 -158.5 5.1 157.8 96 -2.0 96 -1.7 0 0.0 0 0.0 12 58
8 A 8 ASN N E E AAB - 95 25 -129.2 114.5 179.8 -168.3 4.6 162.9 25 -2.0 25 -1.3 0 0.0 0 0.0 12 50
9 A 9 LEU L E E AAB - 94 24 -101.4 142.7 -179.7 -168.6 0.2 143.5 94 -2.5 94 -2.4 0 0.0 0 0.0 13 54
10 A 10 THR T E E AAB - 93 23 -134.5 108.6 179.2 -177.7 4.7 159.4 23 -2.3 23 -1.0 0 0.0 12 -0.6 12 51
11 A 11 ILE I E E AAB + 92 22 -111.4 120.2 179.2 151.9 16.6 158.6 92 -1.2 92 -3.1 0 0.0 0 0.0 13 50
12 A 12 LYS K e - 0 0 -126.7 -166.9 179.3 -83.7 48.6 123.7 21 -0.9 0 0.0 10 -0.6 0 0.0 12 46
13 A 13 ASP D - 0 0 -101.2 145.7 179.2 -109.7 48.0 140.9 0 0.0 0 0.0 0 0.0 0 0.0 11 39
14 A 14 PRO P + 0 0 -60.1 -168.3 -179.0 171.4 40.4 88.9 0 0.0 0 0.0 0 0.0 0 0.0 8 31
15 A 15 THR T t > T - 0 0 158.8 102.8 -180.0 -126.0 43.9 103.1 0 0.0 18 -4.9 0 0.0 0 0.0 7 20
16 A 16 PRO P T T 3 TS+ 0 0 -45.0 0.4 177.5 64.6 116.6 56.5 0 0.0 0 0.0 0 0.0 0 0.0 5 13
17 A 17 ALA A T T 3 TS+ 0 0 -90.3 -31.0 178.2 1.5 129.8 43.2 0 0.0 0 0.0 0 0.0 0 0.0 4 11
18 A 18 ASP D S t < TS+ 0 0 -155.8 74.0 -179.0 178.5 78.1 121.4 15 -4.9 0 0.0 0 0.0 0 0.0 6 18
19 A 19 PRO P + 0 0 -48.1 -56.6 179.3 108.8 45.2 27.5 0 0.0 0 0.0 0 0.0 0 0.0 8 22
20 A 20 LEU L - 0 0 -28.0 112.0 179.4 -175.9 44.7 86.2 0 0.0 0 0.0 0 0.0 0 0.0 12 31
21 A 21 TRP W e + 0 0 -99.0 1.0 178.0 19.9 68.8 66.9 0 0.0 12 -0.9 0 0.0 0 0.0 11 42
22 A 22 TYR Y E E AB + 11 0 -165.8 146.2 -179.4 174.6 61.2 161.7 0 0.0 38 -0.8 0 0.0 0 0.0 11 47
23 A 23 GLU E E E ABC - 10 37 -155.7 142.6 179.7 -169.3 6.9 165.9 10 -1.0 10 -2.3 0 0.0 0 0.0 13 46
24 A 24 ALA A E E ABC - 9 36 -141.1 143.5 179.0 -177.9 5.8 178.2 36 -2.0 36 -1.6 0 0.0 0 0.0 12 49
25 A 25 LYS K E E ABC - 8 35 -140.5 127.5 177.7 -168.9 4.8 172.9 8 -1.3 8 -2.0 0 0.0 0 0.0 12 44
26 A 26 CYS C E E ABC + 7 34 -118.7 124.4 178.8 168.0 16.4 168.1 34 -1.5 33 -1.4 0 0.0 34 -0.8 12 57
27 A 27 PHE F E E ABC - 6 32 -129.8 158.9 174.7 -145.8 32.2 156.7 6 -2.3 6 -2.7 0 0.0 29 -0.6 12 47
28 A 28 VAL V E E ABC> TS- 5 31 -121.9 101.1 -177.5 -45.8 83.7 160.8 31 -1.8 31 -1.5 0 0.0 30 -1.1 13 47
29 A 29 GLY G T e 3 TS- 0 0 74.9 -102.2 179.6 -25.2 126.7 128.2 27 -0.6 0 0.0 4 -0.6 0 0.0 7 31
30 A 30 GLU E T T 3 TS+ 0 0 -115.8 -22.2 -179.1 109.1 110.7 53.8 28 -1.1 0 0.0 0 0.0 0 0.0 5 27
31 A 31 ILE I E E AC < T - 28 0 -63.9 112.8 178.1 -145.6 61.1 115.4 28 -1.5 28 -1.8 0 0.0 0 0.0 6 39
32 A 32 LEU L E E AC + 27 0 -73.7 156.5 -178.5 163.9 28.0 114.1 0 0.0 0 0.0 0 0.0 0 0.0 9 43
33 A 33 ILE I E E A* + 0 0 -132.5 -70.1 -178.0 22.7 59.5 62.5 26 -1.4 0 0.0 0 0.0 0 0.0 13 53
34 A 34 LEU L E E AC + 26 0 -109.7 146.9 175.6 174.0 49.4 142.6 26 -0.8 26 -1.5 0 0.0 0 0.0 10 51
35 A 35 HIS H E E AC + 25 0 -155.1 101.3 -179.6 167.2 18.5 139.6 0 0.0 0 0.0 0 0.0 0 0.0 9 48
36 A 36 LEU L E E AC + 24 0 -116.2 167.7 179.7 146.1 6.9 137.2 24 -1.6 24 -2.0 0 0.0 0 0.0 8 42
37 A 37 SER S E E AC - 23 0 178.6 171.8 -179.8 -95.7 57.1 155.8 0 0.0 0 0.0 0 0.0 0 0.0 10 40
38 A 38 ASN N S e S+ 0 0 -88.1 4.2 -179.6 87.9 95.0 67.3 22 -0.8 0 0.0 0 0.0 0 0.0 8 33
39 A 39 ILE I S S S- 0 0 -72.3 -118.0 -178.1 -66.7 79.9 43.1 0 0.0 0 0.0 0 0.0 0 0.0 5 25
40 A 40 ASN N - 0 0 -132.3 -164.5 -175.7 -85.5 36.7 123.4 0 0.0 0 0.0 0 0.0 0 0.0 5 15
41 A 41 LYS K + 0 0 -110.7 163.2 -179.7 107.4 49.3 128.0 0 0.0 0 0.0 0 0.0 0 0.0 4 12
42 A 42 THR T - 0 0 -176.6 -88.2 -179.7 -130.9 52.5 107.1 0 0.0 0 0.0 0 0.0 0 0.0 4 12
43 A 43 MET M - 0 0 92.9 101.4 -178.3 -165.3 20.9 34.5 0 0.0 0 0.0 0 0.0 0 0.0 4 19
44 A 44 THR T - 0 0 -100.8 141.7 177.3 -165.9 2.9 136.3 0 0.0 0 0.0 0 0.0 0 0.0 4 15
45 A 45 SER S + 0 0 -129.4 150.9 179.8 172.8 20.9 161.5 0 0.0 0 0.0 0 0.0 0 0.0 6 16
46 A 46 GLY G S S S- 0 0 -129.3 -9.9 179.1 -53.7 87.1 67.4 0 0.0 0 0.0 0 0.0 0 0.0 5 12
47 A 47 ASP D S S S+ 0 0 163.7 -49.4 -179.6 58.0 124.3 102.8 0 0.0 0 0.0 0 0.0 0 0.0 4 14
48 A 48 PRO P + 0 0 -70.8 -117.0 179.4 122.8 42.3 34.8 0 0.0 0 0.0 0 0.0 0 0.0 6 24
49 A 49 GLY G S S S+ 0 0 77.2 -21.6 -177.4 35.2 83.9 82.9 0 0.0 0 0.0 0 0.0 0 0.0 7 30
50 A 50 GLU E t > >T + 0 0 -124.8 -78.4 -177.0 159.8 39.1 48.0 0 0.0 55 -0.7 0 0.0 54 -0.7 7 26
51 A 51 THR T T T 4 >5T - 0 0 38.8 47.1 179.7 -123.0 61.5 27.7 0 0.0 53 -2.2 0 0.0 54 -1.9 7 32
52 A 52 ALA A T h > 35TS+ 0 0 15.8 -46.0 179.4 60.6 107.0 77.7 0 0.0 56 -0.9 0 0.0 0 0.0 6 26
53 A 53 ASN N H H > 35TS+ 0 0 -72.6 -18.4 179.8 55.3 102.2 47.2 51 -2.2 57 -1.8 0 0.0 0 0.0 10 35
54 A 54 ALA A H H X <5TS+ 0 0 -81.6 -35.2 178.8 51.5 103.5 35.1 51 -1.9 58 -3.2 50 -0.7 0 0.0 10 44
55 A 55 THR T H H > TS+ 0 0 -49.6 -34.3 178.2 46.2 115.6 29.7 0 0.0 68 -1.0 0 0.0 0 0.0 10 44
65 A 65 LEU L H H X TS+ 0 0 -71.1 -47.0 179.6 51.9 110.4 21.8 61 -2.8 69 -2.2 0 0.0 0 0.0 9 56
66 A 66 LYS K H H X TS+ 0 0 -56.6 -41.7 -179.8 49.6 109.6 27.1 62 -2.6 70 -1.9 0 0.0 0 0.0 8 42
67 A 67 ASN N H H X TS+ 0 0 -68.4 -28.2 180.0 56.0 107.7 37.1 63 -2.9 71 -2.5 0 0.0 0 0.0 8 38
68 A 68 LEU L H H X TS+ 0 0 -70.1 -44.8 179.6 46.8 107.1 23.8 64 -1.0 72 -3.1 0 0.0 0 0.0 11 52
69 A 69 CYS C H H X TS+ 0 0 -63.6 -37.8 179.4 52.0 111.9 25.8 65 -2.2 73 -1.8 0 0.0 0 0.0 11 54
70 A 70 GLN Q H H X TS+ 0 0 -60.1 -50.4 179.9 46.8 111.8 14.6 66 -1.9 74 -1.1 0 0.0 0 0.0 8 39
71 A 71 LYS K H H X > TS+ 0 0 -53.9 -53.0 -178.9 47.0 114.3 22.3 67 -2.5 75 -2.2 0 0.0 74 -0.8 9 44
72 A 72 LEU L H H X 3 TS+ 0 0 -66.2 -24.7 179.8 64.9 100.9 45.6 68 -3.1 76 -1.8 0 0.0 0 0.0 9 57
73 A 73 ARG R H H X 3 TS+ 0 0 -69.7 -27.7 -179.6 34.8 113.2 33.4 69 -1.8 77 -1.1 0 0.0 0 0.0 10 44
74 A 74 ASN N H H X < TS+ 0 0 -90.8 -36.3 -180.0 59.6 112.4 33.6 70 -1.1 78 -2.0 71 -0.8 0 0.0 8 33
75 A 75 LYS K H H < TS+ 0 0 -58.0 -35.7 -178.7 41.9 112.3 32.1 71 -2.2 0 0.0 0 0.0 0 0.0 9 47
76 A 76 VAL V H H < TS+ 0 0 -82.9 -40.3 179.8 49.9 111.9 31.1 72 -1.8 0 0.0 0 0.0 0 0.0 9 50
77 A 77 SER S H H < TS+ 0 0 -68.9 -28.7 179.8 53.3 110.5 35.3 73 -1.1 0 0.0 0 0.0 0 0.0 10 36
78 A 78 ASN N S h < TS+ 0 0 -75.6 -23.6 -178.1 98.4 94.4 42.5 74 -2.0 0 0.0 0 0.0 0 0.0 6 32
79 A 79 THR T - 0 0 -76.4 138.5 179.2 -143.3 64.8 115.5 0 0.0 0 0.0 0 0.0 0 0.0 7 41
80 A 80 LYS K + 0 0 -100.1 132.2 -179.9 166.3 27.2 146.5 0 0.0 0 0.0 0 0.0 0 0.0 5 33
81 A 81 VAL V - 0 0 -116.1 -140.2 179.3 -92.2 49.5 89.5 0 0.0 0 0.0 0 0.0 0 0.0 4 34
82 A 82 ASP D S S S+ 0 0 -119.2 -14.8 -178.6 95.5 90.5 62.8 0 0.0 0 0.0 0 0.0 0 0.0 4 24
83 A 83 THR T S S S- 0 0 -83.1 157.5 179.3 -106.3 79.6 112.3 0 0.0 85 -0.5 0 0.0 0 0.0 4 23
84 A 84 HIS H - 0 0 -86.9 124.0 -179.7 -133.4 35.0 136.5 0 0.0 0 0.0 0 0.0 0 0.0 4 15
85 A 85 LYS K + 0 0 -75.8 153.5 179.4 178.2 25.6 111.8 83 -0.5 0 0.0 0 0.0 0 0.0 6 20
86 A 86 THR T S S S- 0 0 -121.4 -34.9 -179.7 -33.2 88.1 54.6 88 -1.7 0 0.0 0 0.0 0 0.0 5 16
87 A 87 ASN N S S S- 0 0 174.3 49.6 -176.4 -38.0 124.6 92.9 0 0.0 0 0.0 0 0.0 0 0.0 4 20
88 A 88 GLY G - 0 0 106.3 -164.1 179.2 -177.8 68.2 135.0 0 0.0 86 -1.7 0 0.0 0 0.0 7 29
89 A 89 TYR Y + 0 0 162.2 -31.6 -179.2 129.4 25.2 78.6 0 0.0 0 0.0 0 0.0 0 0.0 9 37
90 A 90 PRO P - 0 0 -48.9 163.9 177.7 -158.7 34.9 84.1 0 0.0 0 0.0 0 0.0 0 0.0 10 42
91 A 91 HIS H e - 0 0 -147.9 110.5 -178.5 -165.6 11.5 151.2 0 0.0 115 -3.7 0 0.0 0 0.0 10 49
92 A 92 LEU L E E AAD - 11 114 -105.1 152.0 -179.2 -168.3 9.5 137.3 11 -3.1 11 -1.2 0 0.0 0 0.0 13 52
93 A 93 GLN Q E E AAD - 10 113 -138.5 108.2 178.4 -176.4 9.6 158.1 113 -1.5 113 -1.7 0 0.0 0 0.0 13 48
94 A 94 VAL V E E AAD - 9 112 -112.7 145.2 -178.7 -176.5 4.9 151.6 9 -2.4 9 -2.5 0 0.0 0 0.0 12 57
95 A 95 THR T E E AAD - 8 111 -141.3 111.8 177.9 -167.8 5.9 157.2 111 -1.8 111 -2.3 0 0.0 0 0.0 12 49
96 A 96 MET M E E AAD - 7 110 -97.7 137.5 -179.0 -161.3 8.1 144.1 7 -1.7 7 -2.0 0 0.0 98 -0.5 11 57
97 A 97 ILE I E E AAD - 6 109 -125.6 104.4 -178.9 -174.2 6.8 154.8 109 -1.8 109 -0.8 0 0.0 0 0.0 11 46
98 A 98 TYR Y E E AA - 5 0 -103.7 110.8 179.9 -166.1 6.0 149.3 5 -3.1 5 -3.3 96 -0.5 0 0.0 10 57
99 A 99 PRO P E E AA - 4 0 -90.0 158.0 -178.7 -80.3 39.7 123.1 0 0.0 0 0.0 0 0.0 0 0.0 9 44
100 A 100 GLN Q e > T - 0 0 -66.1 120.9 178.3 -144.4 42.7 113.4 3 -0.7 102 -0.7 0 0.0 103 -0.6 12 40
101 A 101 SER S T T 3 T + 0 0 -92.7 118.5 177.3 125.5 60.5 142.0 0 0.0 0 0.0 0 0.0 0 0.0 9 35
102 A 102 GLN Q T T 3 TS+ 0 0 -127.6 -33.3 179.7 93.2 74.5 82.9 100 -0.7 0 0.0 0 0.0 0 0.0 4 25
103 A 103 GLY G S t < TS- 0 0 -59.6 153.6 -179.7 -79.1 99.6 95.9 100 -0.6 0 0.0 0 0.0 0 0.0 6 25
104 A 104 ARG R S S S- 0 0 -51.0 167.9 179.0 -5.2 96.4 86.0 0 0.0 0 0.0 0 0.0 0 0.0 5 18
105 A 105 THR T S S S- 0 0 2.6 118.3 -179.7 -93.8 93.3 56.7 0 0.0 0 0.0 0 0.0 0 0.0 6 28
106 A 106 PRO P + 0 0 -50.4 129.9 179.0 178.6 52.3 99.8 0 0.0 0 0.0 0 0.0 0 0.0 10 36
107 A 107 SER S + 0 0 -136.9 155.7 178.0 178.3 11.9 162.1 0 0.0 0 0.0 0 0.0 0 0.0 11 44
108 A 108 ALA A e - 0 0 -144.4 171.6 178.1 -126.4 23.9 152.4 0 0.0 124 -2.1 0 0.0 125 -0.5 12 53
109 A 109 THR T E E ADE - 97 123 -129.0 128.6 179.2 -154.2 14.2 175.6 97 -0.8 97 -1.8 0 0.0 111 -0.6 13 46
110 A 110 TRP W E E ADE - 96 122 -103.9 121.9 -179.5 -162.0 12.1 157.1 122 -2.4 122 -2.4 0 0.0 0 0.0 13 56
111 A 111 GLU E E E ADE - 95 121 -108.5 129.3 178.9 -159.5 1.1 153.4 95 -2.3 95 -1.8 109 -0.6 0 0.0 12 52
112 A 112 PHE F E E ADE + 94 120 -113.1 134.9 179.9 179.8 11.3 155.3 120 -2.6 120 -1.5 0 0.0 0 0.0 12 59
113 A 113 ASN N E E ADE - 93 119 -130.8 107.6 178.6 -166.7 9.1 162.6 93 -1.7 93 -1.5 0 0.0 115 -0.6 12 44
114 A 114 ILE I E E >ADE> TS- 92 118 -101.6 122.1 179.1 -28.9 72.8 151.4 118 -2.8 117 -2.4 0 0.0 118 -2.4 11 49
115 A 115 SER S T e 4 3 TS- 0 0 51.8 13.3 179.3 -78.8 105.5 53.5 91 -3.7 0 0.0 113 -0.6 0 0.0 9 37
116 A 116 ASP D T T 4 3 TS+ 0 0 74.3 5.4 179.0 83.8 128.8 58.1 0 0.0 0 0.0 0 0.0 0 0.0 6 30
117 A 117 SER S T T 4 < TS+ 0 0 -103.9 -45.3 -178.4 51.0 80.5 35.5 114 -2.4 0 0.0 0 0.0 0 0.0 6 33
118 A 118 TYR Y E E AEF >T - 109 128 -110.2 108.7 179.6 -167.5 5.2 152.3 128 -3.6 128 -1.8 0 0.0 127 -0.6 12 37
124 A 124 THR T T e 4 5TS+ 0 0 -59.2 -31.6 -179.5 71.6 81.2 36.6 108 -2.1 0 0.0 122 -0.7 0 0.0 12 41
125 A 125 GLU E T T 4 5TS+ 0 0 -51.0 -61.1 179.8 7.4 121.7 19.1 108 -0.5 0 0.0 0 0.0 0 0.0 10 34
126 A 126 ASN N T T 4 5TS- 0 0 -111.6 22.6 179.0 -112.8 104.2 86.7 0 0.0 0 0.0 0 0.0 0 0.0 5 24
127 A 127 MET M T T < 5T + 0 0 48.0 55.0 -178.3 144.5 68.9 23.8 123 -0.6 0 0.0 0 0.0 0 0.0 7 35
128 A 128 SER S E E AF TS- 0 0 -168.0 -178.1 -179.1 -83.5 76.4 155.8 0 0.0 137 -2.1 0 0.0 0 0.0 7 21
134 A 134 ASP D H H > TS+ 0 0 -75.5 -23.6 179.7 63.9 121.6 41.2 0 0.0 138 -0.7 0 0.0 0 0.0 7 20
135 A 135 GLU E H H > TS+ 0 0 -66.1 -34.7 -179.8 35.3 113.0 29.7 0 0.0 139 -0.5 0 0.0 0 0.0 7 28
136 A 136 SER S H H > > TS+ 0 0 -84.7 -39.2 179.8 65.3 107.7 34.2 0 0.0 140 -2.3 0 0.0 139 -0.5 12 35
137 A 137 GLY G H H X 3 TS+ 0 0 -59.2 -15.9 179.9 66.9 93.0 46.5 133 -2.1 141 -2.1 0 0.0 0 0.0 12 30
138 A 138 VAL V H H X 3 TS+ 0 0 -70.2 -51.8 179.4 36.9 106.0 15.2 134 -0.7 142 -0.7 0 0.0 0 0.0 8 32
139 A 139 ILE I H H X X TS+ 0 0 -62.0 -50.1 -179.6 59.8 113.9 16.5 135 -0.5 143 -2.5 136 -0.5 142 -2.0 9 44
140 A 140 MET M H H X 3 TS+ 0 0 -42.8 -53.4 -178.6 51.1 102.5 26.6 136 -2.3 144 -3.8 0 0.0 0 0.0 11 45
141 A 141 ASN N H H < 3 TS+ 0 0 -63.9 -19.1 178.0 50.5 109.5 46.6 137 -2.1 0 0.0 0 0.0 0 0.0 8 33
142 A 142 LYS K H H < < TS+ 0 0 -81.5 -44.2 -179.7 41.0 116.8 26.1 139 -2.0 0 0.0 138 -0.7 0 0.0 8 36
143 A 143 TRP W H H < > TS+ 0 0 -66.5 -54.9 -178.6 54.1 110.5 15.4 139 -2.5 146 -3.6 0 0.0 0 0.0 10 47
144 A 144 LYS K T h < 3 TS+ 0 0 -55.1 -17.9 -178.4 63.6 102.1 44.0 140 -3.8 0 0.0 0 0.0 0 0.0 10 38
145 A 145 ASP D T T 3 TS+ 0 0 -88.1 4.0 178.7 94.8 79.9 65.1 0 0.0 147 -1.0 0 0.0 0 0.0 7 28
146 A 146 ASP D h > < T - 0 0 -98.0 99.9 -178.7 -165.7 60.4 144.9 143 -3.6 150 -2.4 0 0.0 0 0.0 8 29
147 A 147 GLY G H H > TS+ 0 0 -50.7 -53.9 179.9 46.1 84.1 27.8 145 -1.0 151 -2.7 0 0.0 0 0.0 7 23
148 A 148 GLU E H H > TS+ 0 0 -59.3 -46.0 178.6 51.4 112.6 22.2 0 0.0 152 -2.9 0 0.0 0 0.0 6 24
149 A 149 PHE F H H > TS+ 0 0 -58.6 -43.5 178.9 45.5 112.4 24.6 0 0.0 153 -1.5 0 0.0 0 0.0 11 40
150 A 150 VAL V H H X TS+ 0 0 -66.3 -45.0 178.5 53.3 111.6 17.0 146 -2.4 154 -1.6 0 0.0 0 0.0 11 45
151 A 151 LYS K H H X TS+ 0 0 -52.0 -52.3 179.1 55.5 103.9 20.6 147 -2.7 155 -3.1 0 0.0 0 0.0 8 35
152 A 152 GLN Q H H X TS+ 0 0 -49.1 -40.6 -179.2 53.4 106.2 27.9 148 -2.9 156 -2.2 0 0.0 0 0.0 10 43
153 A 153 LEU L H H X TS+ 0 0 -63.4 -43.8 -179.3 37.4 114.9 27.4 149 -1.5 157 -0.9 0 0.0 0 0.0 11 56
154 A 154 LYS K H H X TS+ 0 0 -73.4 -49.4 -179.3 51.7 116.7 19.6 150 -1.6 158 -2.9 0 0.0 0 0.0 9 43
155 A 155 PHE F H H X TS+ 0 0 -56.7 -39.1 179.3 60.6 101.2 33.3 151 -3.1 159 -2.5 0 0.0 0 0.0 8 40
156 A 156 LEU L H H X TS+ 0 0 -55.5 -43.0 -179.2 38.1 114.5 19.5 152 -2.2 160 -1.7 0 0.0 0 0.0 11 54
157 A 157 ILE I H H X TS+ 0 0 -73.3 -53.1 -179.8 51.0 114.0 15.5 153 -0.9 161 -0.6 0 0.0 0 0.0 11 54
158 A 158 HIS H H H < > TS+ 0 0 -47.0 -50.8 179.8 47.5 115.3 22.8 154 -2.9 161 -0.6 0 0.0 0 0.0 8 39
159 A 159 GLU E H H < 3 TS+ 0 0 -54.6 -71.5 -179.0 32.0 118.7 15.3 155 -2.5 0 0.0 0 0.0 0 0.0 8 34
160 A 160 CYS C H H X 3 TS+ 0 0 -80.1 18.0 -178.2 111.4 90.4 78.9 156 -1.7 164 -1.5 0 0.0 0 0.0 11 48
161 A 161 SER S H H X < TS+ 0 0 -55.3 -65.0 -179.0 37.8 77.5 15.1 158 -0.6 165 -2.0 157 -0.6 0 0.0 9 48
162 A 162 GLN Q H H > TS+ 0 0 -56.2 -49.4 -178.7 53.0 114.8 24.5 0 0.0 166 -2.9 0 0.0 0 0.0 7 39
163 A 163 LYS K H H > TS+ 0 0 -61.4 -28.1 178.8 48.5 110.6 38.5 0 0.0 167 -1.7 0 0.0 0 0.0 11 43
164 A 164 MET M H H X TS+ 0 0 -79.2 -36.0 178.7 51.0 111.0 31.8 160 -1.5 168 -1.8 0 0.0 0 0.0 11 57
165 A 165 ASP D H H X TS+ 0 0 -64.8 -44.0 179.0 48.1 110.7 23.4 161 -2.0 169 -1.9 0 0.0 0 0.0 10 47
166 A 166 GLU E H H X TS+ 0 0 -62.3 -46.0 179.9 49.6 111.6 21.0 162 -2.9 170 -2.2 0 0.0 0 0.0 9 38
167 A 167 PHE F H H X TS+ 0 0 -62.3 -32.6 -179.2 52.6 110.0 32.1 163 -1.7 171 -1.9 0 0.0 0 0.0 11 46
168 A 168 LEU L H H < TS+ 0 0 -71.8 -34.6 179.5 51.5 107.3 30.1 164 -1.8 0 0.0 0 0.0 0 0.0 13 46
169 A 169 LYS K H H < TS+ 0 0 -65.3 -53.6 -179.8 40.8 114.7 13.4 165 -1.9 0 0.0 0 0.0 0 0.0 9 33
170 A 170 GLN Q H H < > TS+ 0 0 -62.7 -35.0 -178.4 96.6 102.2 29.7 166 -2.2 173 -0.7 0 0.0 0 0.0 7 33
171 A 171 SER S T h < 3 TS+ 0 0 -61.7 151.5 -179.2 18.0 83.7 98.2 167 -1.9 0 0.0 0 0.0 0 0.0 7 40
172 A 172 LYS K T T 3 TS+ 0 0 57.9 32.4 -179.3 107.5 104.6 38.9 0 0.0 0 0.0 0 0.0 0 0.0 6 28
173 A 173 GLU E t < T 0 0 -144.4 103.1 178.7 999.9 999.9 149.3 170 -0.7 0 0.0 0 0.0 0 0.0 5 19
174 A 174 LYS K 0 0 -126.1 999.9 999.9 999.9 999.9 51.1 0 0.0 0 0.0 0 0.0 0 0.0 2 10
1jfmA.pdb
1JFM IMMUNE SYSTEM MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand EEEEEEEE TTS EEEEEEETTEEEEEEESS SS S TTHHHHHHHHHHHHHHHHHHHHHHHHHS SS SS EEEEEEEE Kabs/Sand
chirality ---------+--+-++++-++---+---+-+++++-+--+---+-++++-+++++++++++++++++++++++++++-+-+--+---+----------- chirality
bends SSS SSS SS SS S SSSSSSSSSSSSSSSSSSSSSSSSSSS SS SS bends
turns TTTT TTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTT T turns
5-turns >5555< 5-turns
3-turns >33< >33< >33< >33< > 3-turns
bridge-2 BBBBBBB CCCCCC DDDDDD bridge-2
bridge-1 AAAAAAAA BBBBBBB CC*CCCC AAAAAAAA bridge-1
sheets AAAAAAAA AAAAAAA AAAAAAA AAAAAAAA sheets
4-turns >4>>X>XXXXXXXXXXXXXX<<<< 4-turns
summary eEEEEEEEEe tTTt eEEEEEEEeTEEEEEEEeS SS StThHHHHHHHHHHHHHHHHHHHHHHHHHh SS SS eEEEEEEEEe summary
sequence DAHSLRCNLTIKDPTPADPLWYEAKCFVGEILILHLSNINKTMTSGDPGETANATEVKKCLTQPLKNLCQKLRNKVSNTKVDTHKTNGYPHLQVTMIYPQ sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand TTSSS EEEEEETTTEEEEEETTTTEEEESSHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHHHHHHHTT Kabs/Sand
chirality ++---++----+---++++----++-+------++++++++++++-++++++++++++++++++++++++++ chirality
bends SSSS SSSS SSS SSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSSSSS bends
turns TTT TTTTT TTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT turns
5-turns >5555< 5-turns
3-turns 33< >33< >33X33<>33< >33< >33< 3-turns
bridge-2 EEEEEE FFFF bridge-2
bridge-1 DDDDDD EEEEEE FFFF bridge-1
sheets AAAAAA AAAAAA AAAA sheets
4-turns >444< >444< >>>>XXXX<<<< >>>>XXXXXXXX<>XXXX<<<< 4-turns
summary TTtSS eEEEEEEeTTEEEEEEeTTTEEEEehHHHHHHHHHHhThHHHHHHHHHHHHHHHHHHHHHHHHhTt summary
sequence SQGRTPSATWEFNISDSYFFTFYTENMSWRSANDESGVIMNKWKDDGEFVKQLKFLIHECSQKMDEFLKQSKEK sequence
110 120 130 140 150 160 170