Secondary structure calculation program - copyright by David Keith Smith, 1989
1i31A.pdb
1I31 ENDOCYTOSIS/EXOCYTOSIS MOL_ID: 1; MOL_ID: 1;
Sequence length - 256
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 159 ILE I t > T 0 0 999.9 102.5 -177.0 999.9 999.9 999.9 0 0.0 4 -0.7 0 0.0 0 0.0 4 22
2 A 160 GLY G T T 3 T + 0 0 -88.6 8.3 179.6 58.4 999.9 80.1 0 0.0 0 0.0 0 0.0 0 0.0 4 17
3 A 161 TRP W T T 3 TS+ 0 0 -114.5 0.6 176.9 46.4 106.7 67.3 0 0.0 0 0.0 0 0.0 0 0.0 7 27
4 A 162 ARG R S t < TS- 0 0 -147.1 130.1 174.2 -134.8 73.4 158.1 1 -0.7 0 0.0 0 0.0 0 0.0 9 30
5 A 163 ARG R - 0 0 -67.7 168.0 -174.9 -119.2 24.0 90.5 0 0.0 0 0.0 0 0.0 0 0.0 7 23
6 A 164 GLU E S S S+ 0 0 -97.3 -24.3 178.8 48.7 93.3 32.2 0 0.0 0 0.0 0 0.0 0 0.0 6 23
7 A 165 GLY G + 0 0 -106.8 37.2 -177.0 153.4 67.9 91.5 0 0.0 0 0.0 0 0.0 0 0.0 5 24
8 A 166 ILE I + 0 0 -59.0 127.6 174.3 178.8 17.2 114.1 0 0.0 50 -2.1 0 0.0 0 0.0 9 31
9 A 167 LYS K + 0 0 -138.3 145.8 177.1 168.9 15.4 172.2 0 0.0 0 0.0 0 0.0 0 0.0 7 30
10 A 168 TYR Y - 0 0 -142.7 138.2 175.4 -153.3 25.5 175.0 0 0.0 0 0.0 0 0.0 0 0.0 8 28
11 A 169 ARG R S S S+ 0 0 -75.5 -36.0 178.0 52.6 97.8 32.7 0 0.0 13 -0.9 0 0.0 0 0.0 5 22
12 A 170 ARG R S S S- 0 0 -102.0 100.4 -176.0 -160.1 81.8 143.4 0 0.0 14 -0.9 0 0.0 0 0.0 8 28
13 A 171 ASN N e + 0 0 -85.7 115.0 -174.5 156.5 28.6 131.2 11 -0.9 240 -2.4 0 0.0 0 0.0 12 39
14 A 172 GLU E E E AaB - 240 47 -142.0 145.7 176.8 -169.7 26.2 167.0 47 -2.1 47 -2.8 12 -0.9 0 0.0 10 41
15 A 173 LEU L E E AaB - 241 46 -136.3 155.0 -179.1 -158.1 6.8 165.6 240 -2.3 242 -2.2 0 0.0 0 0.0 13 50
16 A 174 PHE F E E AaB - 242 45 -127.1 128.6 -179.9 -158.1 8.8 173.0 45 -3.5 45 -2.2 0 0.0 0 0.0 11 41
17 A 175 LEU L E E AaB - 243 44 -113.4 139.3 179.3 -165.3 2.8 152.6 242 -2.8 244 -1.9 0 0.0 19 -0.5 12 52
18 A 176 ASP D E E AaB - 244 43 -118.5 112.9 176.4 -167.4 5.9 162.0 43 -2.9 43 -2.5 0 0.0 20 -0.8 12 46
19 A 177 VAL V E E AaB - 245 42 -102.1 100.8 -174.4 -176.6 19.3 157.3 244 -2.4 246 -2.5 17 -0.5 21 -0.5 14 54
20 A 178 LEU L E E AaB + 246 41 -103.0 123.1 -179.4 173.2 4.9 167.6 41 -3.0 41 -3.1 18 -0.8 0 0.0 13 47
21 A 179 GLU E E E AaB - 247 40 -136.9 147.6 177.8 -151.8 27.1 163.4 246 -1.9 248 -3.0 19 -0.5 23 -0.6 14 53
22 A 180 SER S E E AaB - 248 39 -111.9 120.3 179.7 -153.2 19.2 161.7 39 -3.3 39 -2.1 0 0.0 24 -0.6 11 47
23 A 181 VAL V E E AaB - 249 38 -100.8 123.8 -176.5 -163.9 10.2 159.4 248 -2.9 250 -1.7 21 -0.6 0 0.0 17 56
24 A 182 ASN N E E A*B + 0 37 -109.7 132.8 178.2 173.4 11.1 155.9 37 -3.2 37 -2.1 22 -0.6 0 0.0 11 49
25 A 183 LEU L E E AaB - 252 36 -138.3 136.5 171.5 -171.3 22.4 176.3 251 -2.2 253 -2.8 0 0.0 0 0.0 14 48
26 A 184 LEU L E E AaB + 253 35 -123.4 105.7 -177.6 179.2 26.2 175.3 35 -2.5 34 -2.4 0 0.0 35 -1.5 13 39
27 A 185 MET M E E AaB - 254 33 -112.6 147.6 178.7 -128.4 21.9 166.4 253 -2.3 255 -3.9 0 0.0 0 0.0 13 38
28 A 186 SER S e - 0 0 -84.2 172.1 -179.8 -106.6 31.9 103.7 32 -1.7 0 0.0 0 0.0 0 0.0 11 30
29 A 187 PRO P S S S+ 0 0 -68.1 -29.9 172.0 59.4 123.0 23.5 0 0.0 0 0.0 0 0.0 0 0.0 10 34
30 A 188 GLN Q S S S- 0 0 -55.5 -59.6 -178.5 -110.5 119.7 21.7 0 0.0 0 0.0 0 0.0 0 0.0 5 23
31 A 189 GLY G + 0 0 131.6 5.7 176.6 140.2 69.4 59.1 0 0.0 0 0.0 0 0.0 0 0.0 7 31
32 A 190 GLN Q e - 0 0 -75.2 145.5 -172.4 -118.9 57.9 114.1 0 0.0 28 -1.7 0 0.0 34 -0.8 7 24
33 A 191 VAL V E E AB + 27 0 -92.3 112.2 178.1 178.9 32.3 155.1 0 0.0 0 0.0 0 0.0 0 0.0 9 33
34 A 192 LEU L E E A* S- 0 0 -82.2 -27.3 -177.3 -8.3 70.5 43.6 26 -2.4 0 0.0 32 -0.8 0 0.0 8 26
35 A 193 SER S E E AB + 26 0 -164.3 138.6 178.8 165.2 68.1 155.0 26 -1.5 26 -2.5 0 0.0 0 0.0 7 32
36 A 194 ALA A E E AB + 25 0 -159.6 147.1 176.6 150.8 4.1 162.7 0 0.0 0 0.0 0 0.0 0 0.0 11 41
37 A 195 HIS H E E AB - 24 0 -167.9 159.4 175.3 -135.9 27.6 163.8 24 -2.1 24 -3.2 0 0.0 0 0.0 12 45
38 A 196 VAL V E E ABC - 23 100 -122.8 142.1 174.5 -165.4 9.7 166.0 100 -3.3 100 -3.3 0 0.0 0 0.0 14 50
39 A 197 SER S E E ABC + 22 99 -122.0 131.0 -179.5 167.1 24.5 176.5 22 -2.1 22 -3.3 0 0.0 0 0.0 11 50
40 A 198 GLY G E E ABC - 21 98 -142.5 172.2 176.7 -159.7 24.2 156.8 98 -3.5 98 -3.0 0 0.0 0 0.0 11 55
41 A 199 ARG R E E ABC - 20 97 -148.4 152.5 178.2 -138.9 15.8 168.1 20 -3.1 20 -3.0 0 0.0 43 -0.6 13 49
42 A 200 VAL V E E ABC - 19 96 -115.9 115.4 179.4 -165.5 20.1 170.4 96 -1.9 95 -2.6 0 0.0 96 -1.2 12 61
43 A 201 VAL V E E ABC - 18 94 -100.9 131.8 -178.0 -160.4 3.4 155.2 18 -2.5 18 -2.9 41 -0.6 0 0.0 13 51
44 A 202 MET M E E ABC - 17 93 -115.8 133.7 -178.8 -174.9 11.0 152.3 93 -2.7 93 -2.7 0 0.0 0 0.0 13 54
45 A 203 LYS K E E ABC + 16 92 -125.4 112.9 -174.3 174.7 21.1 165.8 16 -2.2 16 -3.5 0 0.0 0 0.0 11 44
46 A 204 SER S E E ABC - 15 91 -130.5 147.9 178.6 -170.0 32.6 162.5 91 -2.5 91 -2.1 0 0.0 0 0.0 12 52
47 A 205 TYR Y E E AB + 14 0 -129.9 79.6 -174.4 156.1 38.2 147.8 14 -2.8 14 -2.1 0 0.0 0 0.0 11 45
48 A 206 LEU L - 0 0 -116.9 143.0 -178.8 -113.4 41.7 157.3 0 0.0 0 0.0 0 0.0 0 0.0 15 51
49 A 207 SER S S S S- 0 0 -75.5 145.6 172.4 -17.3 72.2 130.6 0 0.0 0 0.0 0 0.0 0 0.0 12 42
50 A 208 GLY G S S S- 0 0 79.6 -126.0 177.7 -37.4 111.5 138.1 8 -2.1 0 0.0 0 0.0 0 0.0 11 40
51 A 209 MET M S S S- 0 0 -139.0 74.5 -175.5 -166.8 72.8 133.8 0 0.0 0 0.0 0 0.0 0 0.0 11 43
52 A 210 PRO P - 0 0 -74.5 144.7 176.7 -142.2 17.0 115.7 0 0.0 54 -0.8 0 0.0 0 0.0 11 50
53 A 211 GLU E E E BD - 228 0 -102.2 109.7 -178.9 -164.8 29.4 156.2 228 -3.0 228 -1.2 0 0.0 0 0.0 11 46
54 A 212 CYS C E E BDE - 227 86 -106.6 156.6 175.1 -151.7 17.1 141.0 86 -4.2 86 -2.7 52 -0.8 0 0.0 12 54
55 A 213 LYS K E E BDE - 226 85 -122.4 116.9 179.3 -160.7 6.8 164.4 226 -2.4 226 -2.2 0 0.0 57 -0.8 12 47
56 A 214 PHE F E E BDE - 225 84 -97.6 112.8 177.7 -179.2 14.2 141.2 84 -1.9 84 -1.3 0 0.0 0 0.0 12 53
57 A 215 GLY G E E BD + 224 0 -115.2 133.5 176.0 165.8 6.1 152.1 224 -2.4 223 -3.8 55 -0.8 224 -2.3 11 43
58 A 216 MET M E E BD - 222 0 -128.3 180.0 -178.4 -80.3 55.5 147.7 0 0.0 60 -2.7 0 0.0 0 0.0 9 46
59 A 217 ASN N S e S+ 0 0 -81.3 56.5 178.4 140.1 76.7 104.2 221 -1.5 66 -2.0 0 0.0 0 0.0 11 33
60 A 218 ASP D + 0 0 -76.1 -150.7 -174.0 103.3 17.3 87.9 58 -2.7 0 0.0 0 0.0 0 0.0 10 35
61 A 219 LYS K 0 0 43.9 80.8 -179.8 999.9 999.9 23.6 0 0.0 0 0.0 0 0.0 0 0.0 7 28
62!A 220 ILE I 0 0 -47.2 999.9 999.9 999.9 999.9 62.2 0 0.0 0 0.0 0 0.0 0 0.0 6 28
63!A 238 LYS K 0 0 999.9 -79.5 -177.3 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 2 15
64 A 239 GLN Q + 0 0 -140.6 117.9 179.5 143.9 999.9 158.2 0 0.0 0 0.0 0 0.0 0 0.0 6 24
65 A 240 SER S - 0 0 -158.5 128.1 -178.2 -167.6 21.3 154.3 0 0.0 0 0.0 0 0.0 0 0.0 10 28
66 A 241 ILE I - 0 0 -123.6 158.5 178.9 -123.7 18.6 149.9 59 -2.0 68 -0.5 0 0.0 0 0.0 13 36
67 A 242 ALA A - 0 0 -100.0 126.2 175.4 -153.1 14.5 148.8 0 0.0 69 -0.8 0 0.0 0 0.0 9 35
68 A 243 ILE I - 0 0 -98.9 107.3 176.4 -166.0 4.2 148.1 66 -0.5 0 0.0 0 0.0 0 0.0 10 43
69 A 244 ASP D S S S- 0 0 -57.9 -40.1 178.0 -26.2 72.1 28.3 99 -1.2 0 0.0 67 -0.8 0 0.0 8 29
70 A 245 ASP D E E AF - 99 0 -170.0 161.2 -177.5 -179.1 60.8 168.7 99 -0.9 99 -2.2 0 0.0 0 0.0 7 26
71 A 246 CYS C E E AF - 98 0 -169.9 138.8 177.5 -148.9 14.1 146.8 0 0.0 0 0.0 0 0.0 0 0.0 9 40
72 A 247 THR T E E AF - 97 0 -112.1 155.9 -179.3 -147.3 20.2 140.7 97 -1.2 97 -2.3 0 0.0 0 0.0 7 29
73 A 248 PHE F E E AF - 96 0 -117.1 165.6 178.4 -95.7 23.5 136.9 0 0.0 0 0.0 0 0.0 0 0.0 9 37
74 A 249 HIS H e > T - 0 0 -72.6 148.5 176.0 -110.0 45.1 128.1 95 -2.0 77 -3.3 0 0.0 0 0.0 8 37
75 A 250 GLN Q T T 3 TS+ 0 0 -49.7 -36.4 -179.7 70.5 115.8 31.5 0 0.0 0 0.0 0 0.0 0 0.0 5 28
76 A 251 CYS C T T 3 TS+ 0 0 -55.9 -20.4 -178.2 97.6 81.2 44.5 0 0.0 0 0.0 0 0.0 0 0.0 10 38
77 A 252 VAL V S t < TS- 0 0 -76.3 139.7 177.9 -136.7 72.7 121.7 74 -3.3 79 -0.9 0 0.0 0 0.0 11 37
78 A 253 ARG R B B A - 85 0 -95.3 97.6 -176.8 -143.1 19.6 148.6 85 -2.3 85 -0.5 0 0.0 0 0.0 8 26
79 A 254 LEU L 0 0 -21.2 -78.8 174.9 999.9 999.9 38.4 77 -0.9 0 0.0 0 0.0 0 0.0 5 24
80!A 255 SER S 0 0 -61.3 999.9 999.9 999.9 999.9 30.0 0 0.0 0 0.0 0 0.0 0 0.0 5 18
81!A 260 GLU E 0 0 999.9 178.0 179.4 999.9 999.9 999.9 0 0.0 83 -0.6 0 0.0 0 0.0 3 20
82 A 261 ARG R + 0 0 -120.4 91.6 -178.7 175.5 999.9 147.4 0 0.0 0 0.0 0 0.0 0 0.0 4 24
83 A 262 SER S - 0 0 -96.9 -179.9 -170.4 -78.1 34.3 100.2 81 -0.6 0 0.0 0 0.0 0 0.0 8 38
84 A 263 ILE I E E BE - 56 0 -86.4 131.2 -178.5 -168.5 38.6 133.7 56 -1.3 56 -1.9 0 0.0 0 0.0 11 43
85 A 264 SER S E E BEA + 55 78 -122.1 125.1 -178.0 140.0 21.9 158.1 78 -0.5 78 -2.3 0 0.0 0 0.0 11 35
86 A 265 PHE F E E BE - 54 0 -160.1 170.2 178.3 -130.5 52.6 179.0 54 -2.7 54 -4.2 0 0.0 0 0.0 10 45
87 A 266 ILE I - 0 0 -123.1 100.0 -172.9 -138.9 50.2 172.0 0 0.0 0 0.0 0 0.0 0 0.0 10 50
88 A 267 PRO P - 0 0 -67.9 154.1 169.7 -111.1 8.9 112.7 0 0.0 0 0.0 0 0.0 0 0.0 12 52
89 A 268 PRO P - 0 0 -67.1 161.6 -177.8 -98.5 48.2 107.2 0 0.0 0 0.0 0 0.0 0 0.0 9 44
90 A 269 ASP D S S S+ 0 0 -84.4 150.4 178.9 9.1 88.4 119.6 0 0.0 0 0.0 0 0.0 0 0.0 10 41
91 A 270 GLY G E E AC S- 46 0 83.7 -153.3 -175.6 -13.2 117.2 128.7 46 -2.1 46 -2.5 0 0.0 0 0.0 8 34
92 A 271 GLU E E E AC + 45 0 -93.7 138.8 170.0 150.1 67.2 145.4 0 0.0 0 0.0 0 0.0 0 0.0 9 30
93 A 272 PHE F E E AC - 44 0 -159.4 162.5 177.2 -98.7 48.8 169.5 44 -2.7 44 -2.7 0 0.0 95 -0.7 9 35
94 A 273 GLU E E E AC - 43 0 -82.8 108.0 -178.2 -175.2 31.0 130.2 0 0.0 0 0.0 0 0.0 0 0.0 10 37
95 A 274 LEU L E E A* - 0 0 -72.0 -48.0 179.9 -18.0 63.1 21.3 42 -2.6 74 -2.0 93 -0.7 0 0.0 11 48
96 A 275 MET M E E ACF - 42 73 -155.5 165.5 -179.2 -144.4 48.5 171.8 42 -1.2 42 -1.9 0 0.0 0 0.0 11 47
97 A 276 ARG R E E ACF + 41 72 -130.5 136.4 -178.0 174.4 29.5 167.9 72 -2.3 72 -1.2 0 0.0 0 0.0 12 41
98 A 277 TYR Y E E ACF - 40 71 -151.7 164.8 -178.5 -142.6 22.9 171.6 40 -3.0 40 -3.5 0 0.0 0 0.0 12 44
99 A 278 ARG R E E ACF - 39 70 -130.8 136.8 176.8 -175.6 15.2 157.1 70 -2.2 69 -1.2 0 0.0 70 -0.9 12 41
100 A 279 THR T E E AC + 38 0 -133.3 151.1 177.0 165.1 19.2 175.6 38 -3.3 38 -3.3 0 0.0 0 0.0 13 45
101 A 280 THR T + 0 0 -133.4 -16.4 -174.3 84.1 56.1 66.7 0 0.0 0 0.0 0 0.0 0 0.0 10 36
102 A 281 LYS K S S S- 0 0 -106.0 145.2 178.5 -4.9 98.2 130.9 0 0.0 0 0.0 0 0.0 0 0.0 8 34
103 A 282 ASP D S S S+ 0 0 54.8 32.8 -179.0 173.9 80.8 39.2 0 0.0 0 0.0 0 0.0 0 0.0 7 36
104 A 283 ILE I - 0 0 -64.5 143.5 173.1 -127.6 32.7 114.7 0 0.0 106 -0.8 0 0.0 0 0.0 12 49
105 A 284 ILE I - 0 0 -96.6 111.7 174.1 -150.7 17.1 145.6 217 -3.4 0 0.0 0 0.0 0 0.0 8 55
106 A 285 LEU L - 0 0 -71.9 116.0 -179.4 -158.2 5.1 132.5 104 -0.8 0 0.0 0 0.0 0 0.0 9 59
107 A 286 PRO P e + 0 0 -76.8 -20.7 -178.6 39.0 69.8 49.0 0 0.0 131 -2.1 0 0.0 0 0.0 9 67
108 A 287 PHE F E E CG - 130 0 -139.1 145.4 174.4 -163.8 56.3 165.9 0 0.0 0 0.0 0 0.0 0 0.0 8 68
109 A 288 ARG R E E CG - 129 0 -118.2 134.6 -178.5 -160.2 14.2 162.4 129 -2.2 129 -2.0 0 0.0 111 -0.5 9 58
110 A 289 VAL V E E CG - 128 0 -112.2 117.9 -178.0 -171.6 5.6 161.4 0 0.0 0 0.0 0 0.0 0 0.0 9 53
111 A 290 ILE I E E CG - 127 0 -119.1 106.3 -175.3 -171.3 9.7 162.6 127 -3.2 127 -2.4 109 -0.5 0 0.0 9 45
112 A 291 PRO P E E CG - 126 0 -95.8 161.5 -178.9 -172.2 8.9 142.6 0 0.0 0 0.0 0 0.0 0 0.0 10 46
113 A 292 LEU L E E CG - 125 0 -153.3 124.3 -178.2 -175.9 2.9 178.5 125 -2.2 125 -2.6 0 0.0 0 0.0 8 37
114 A 293 VAL V E E CG - 124 0 -129.7 138.6 177.6 -172.8 4.1 171.6 0 0.0 0 0.0 0 0.0 0 0.0 8 42
115 A 294 ARG R E E CG - 123 0 -129.5 135.2 178.1 -136.2 20.1 170.9 123 -2.1 123 -2.8 0 0.0 0 0.0 7 27
116 A 295 GLU E E E CG - 122 0 -93.4 129.1 -179.9 -161.0 12.7 140.2 0 0.0 118 -0.6 0 0.0 0 0.0 8 30
117 A 296 VAL V E E >CG > T - 121 0 -118.0 101.3 178.4 -63.3 57.3 155.4 121 -2.4 121 -2.5 0 0.0 120 -1.2 8 21
118 A 297 GLY G T T 4 3 TS- 0 0 61.4 -135.1 -175.1 -57.1 89.3 113.0 116 -0.6 0 0.0 0 0.0 0 0.0 5 19
119 A 298 ARG R T T 4 3 TS+ 0 0 -125.5 11.2 -177.2 66.1 131.6 72.8 0 0.0 0 0.0 0 0.0 0 0.0 7 28
120 A 299 THR T T e 4 < TS+ 0 0 -105.8 -36.8 179.7 28.9 98.1 48.8 117 -1.2 193 -4.2 0 0.0 0 0.0 9 31
121 A 300 LYS K E E T - 0 0 -41.6 151.9 176.2 -132.7 45.7 91.4 0 0.0 136 -1.5 0 0.0 181 -1.0 8 26
134 A 313 PRO P T T 3 TS+ 0 0 -78.5 -21.0 -174.6 61.8 104.1 47.3 0 0.0 0 0.0 0 0.0 0 0.0 9 22
135 A 314 SER S T T 3 TS+ 0 0 -81.5 -18.6 177.7 78.1 92.3 46.1 0 0.0 0 0.0 0 0.0 0 0.0 6 19
136 A 315 LEU L e < T - 0 0 -86.5 139.5 175.5 -149.0 69.4 141.7 133 -1.5 181 -1.8 0 0.0 0 0.0 10 33
137 A 316 LEU L E E AI - 180 0 -106.6 142.5 175.6 -147.2 2.1 143.9 0 0.0 0 0.0 0 0.0 0 0.0 11 36
138 A 317 ALA A E E AI - 179 0 -94.9 167.9 172.1 -171.3 23.2 142.7 179 -2.8 179 -1.8 0 0.0 0 0.0 13 48
139 A 318 GLN Q E E AIJ + 178 212 -152.7 168.6 179.4 37.3 53.3 152.3 212 -2.3 212 -2.3 0 0.0 0 0.0 11 41
140 A 319 LYS K E E A** S+ 0 0 59.6 39.0 -179.8 175.6 73.5 32.2 177 -1.0 0 0.0 0 0.0 0 0.0 11 36
141 A 320 ILE I E E AI* + 176 0 -79.5 145.3 176.5 175.2 8.8 128.3 176 -2.0 176 -2.6 0 0.0 0 0.0 13 54
142 A 321 GLU E E E AIJ - 175 210 -145.0 133.4 -174.7 -166.4 13.7 172.4 210 -2.6 210 -2.4 0 0.0 0 0.0 11 52
143 A 322 VAL V E E AIJ - 174 209 -125.5 118.1 -176.7 -161.4 10.1 175.9 174 -2.6 174 -3.1 0 0.0 145 -0.5 11 66
144 A 323 ARG R E E AIJ - 173 208 -111.9 114.3 -174.6 -172.0 5.9 165.0 208 -3.1 208 -2.0 0 0.0 0 0.0 11 57
145 A 324 ILE I E E AI - 172 0 -110.1 114.8 -175.7 -133.1 20.6 159.4 172 -2.6 172 -2.8 143 -0.5 0 0.0 10 62
146 A 325 PRO P E E AI - 171 0 -69.6 143.0 175.2 -153.0 15.5 124.8 0 0.0 0 0.0 0 0.0 0 0.0 11 54
147 A 326 THR T e - 0 0 -115.4 148.2 -179.3 -102.9 24.6 153.6 170 -2.6 0 0.0 0 0.0 0 0.0 9 54
148 A 327 PRO P t > T - 0 0 -60.9 160.8 -177.8 -113.7 31.3 100.5 0 0.0 151 -1.1 0 0.0 0 0.0 8 46
149 A 328 LEU L T T 3 TS+ 0 0 -77.4 -17.7 174.0 62.8 112.6 34.4 0 0.0 0 0.0 0 0.0 0 0.0 5 35
150 A 329 ASN N T e 3 TS+ 0 0 -90.0 27.7 179.6 137.2 74.4 84.3 0 0.0 194 -4.5 0 0.0 152 -0.7 8 34
151 A 330 THR T E E CK < T + 193 0 -71.6 120.4 175.4 179.5 30.2 123.9 148 -1.1 0 0.0 0 0.0 0 0.0 11 39
152 A 331 SER S E E C* - 0 0 -93.9 -17.6 179.3 -26.6 65.7 40.8 192 -2.4 0 0.0 150 -0.7 0 0.0 8 30
153 A 332 GLY G E E CK - 192 0 178.1 163.5 -178.0 -129.6 52.7 167.1 192 -1.8 192 -3.8 0 0.0 0 0.0 7 36
154 A 333 VAL V E E CK - 191 0 -133.3 137.2 172.9 -164.9 4.3 169.5 0 0.0 0 0.0 0 0.0 0 0.0 10 42
155 A 334 GLN Q E E CK - 190 0 -112.0 130.4 175.5 -177.4 21.1 152.3 190 -2.7 190 -3.0 0 0.0 0 0.0 8 36
156 A 335 VAL V E E CK - 189 0 -125.8 147.8 171.1 -164.2 16.9 167.0 0 0.0 0 0.0 0 0.0 0 0.0 9 42
157 A 336 ILE I E E CK + 188 0 -123.7 115.4 172.8 163.4 18.3 169.9 188 -3.2 188 -2.2 0 0.0 0 0.0 7 31
158 A 337 CYS C - 0 0 -134.9 122.6 178.7 -169.5 23.9 158.2 0 0.0 0 0.0 0 0.0 0 0.0 10 34
159 A 338 MET M S S S+ 0 0 -68.9 -38.6 -174.9 49.6 81.1 39.7 0 0.0 0 0.0 0 0.0 0 0.0 6 26
160 A 339 LYS K S S S- 0 0 -106.7 141.4 175.1 -15.9 113.1 166.6 0 0.0 0 0.0 0 0.0 0 0.0 7 35
161 A 340 GLY G S S S- 0 0 71.3 -158.9 -174.6 -71.5 86.3 111.5 0 0.0 0 0.0 0 0.0 0 0.0 9 36
162 A 341 LYS K E E AL - 175 0 -144.4 137.0 -176.4 -166.9 37.6 169.2 175 -2.6 175 -4.6 0 0.0 0 0.0 8 33
163 A 342 ALA A E E AL - 174 0 -126.6 142.3 -179.6 -174.1 3.6 173.6 0 0.0 0 0.0 0 0.0 0 0.0 10 46
164 A 343 LYS K E E AL - 173 0 -142.0 129.8 176.3 -129.2 25.3 175.4 173 -2.1 173 -2.2 0 0.0 0 0.0 7 34
165 A 344 TYR Y E E AL - 172 0 -76.4 126.1 176.5 -160.6 22.1 129.6 0 0.0 167 -0.6 0 0.0 0 0.0 9 40
166 A 345 LYS K E E AL >>T - 171 0 -109.0 95.5 -178.6 -171.1 6.5 148.7 171 -3.5 171 -1.4 0 0.0 169 -1.2 9 31
167 A 346 ALA A G G >5TS+ 0 0 -55.3 -38.6 177.5 53.6 84.3 25.7 165 -0.6 170 -0.6 0 0.0 0 0.0 6 28
168 A 347 SER S G G 35TS+ 0 0 -68.7 -30.1 -179.4 40.2 115.1 38.6 0 0.0 0 0.0 0 0.0 0 0.0 5 20
169 A 348 GLU E G G <5TS- 0 0 -92.6 -2.7 -178.6 -131.2 105.7 57.4 166 -1.2 0 0.0 0 0.0 0 0.0 5 26
170 A 349 ASN N T e <5TS+ 0 0 55.3 52.6 179.6 102.1 70.4 23.0 167 -0.6 147 -2.6 0 0.0 0 0.0 11 36
171 A 350 ALA A E E AIL T - 0 0 -89.6 119.6 177.4 -154.8 22.7 134.0 0 0.0 219 -2.0 0 0.0 0 0.0 14 62
217 A 396 PRO P T T 3 TS+ 0 0 -59.8 -26.8 -178.3 66.9 93.5 38.4 0 0.0 105 -3.4 0 0.0 0 0.0 13 62
218 A 397 SER S T T 3 TS- 0 0 -67.2 -28.5 -179.4 -115.3 114.4 40.2 0 0.0 0 0.0 0 0.0 0 0.0 14 57
219 A 398 GLY G t < T + 0 0 110.8 -8.0 -174.3 156.3 61.5 76.6 216 -2.0 0 0.0 0 0.0 0 0.0 11 52
220 A 399 LEU L - 0 0 -57.9 141.5 177.6 -175.3 18.8 104.5 0 0.0 0 0.0 0 0.0 0 0.0 11 57
221 A 400 LYS K e - 0 0 -135.6 136.3 -177.3 -130.6 23.8 166.4 0 0.0 59 -1.5 0 0.0 0 0.0 8 45
222 A 401 VAL V E E BD - 58 0 -87.9 134.8 -178.2 -179.9 23.6 146.5 0 0.0 0 0.0 0 0.0 0 0.0 10 47
223 A 402 ARG R E E B* - 0 0 -101.5 -34.4 179.6 -20.8 58.9 43.3 57 -3.8 0 0.0 0 0.0 0 0.0 8 35
224 A 403 TYR Y E E BD - 57 0 -169.1 160.2 176.9 -150.0 35.3 167.9 57 -2.3 57 -2.4 0 0.0 0 0.0 8 38
225 A 404 LEU L E E BD - 56 0 -136.9 99.7 -172.6 -161.4 29.8 160.8 0 0.0 0 0.0 0 0.0 0 0.0 10 48
226 A 405 LYS K E E BD - 55 0 -91.6 129.3 -176.5 -162.8 2.8 143.0 55 -2.2 55 -2.4 0 0.0 0 0.0 8 42
227 A 406 VAL V E E BD + 54 0 -118.0 125.2 -178.9 178.0 9.7 165.4 0 0.0 236 -0.8 0 0.0 0 0.0 11 47
228 A 407 PHE F E E BD + 53 0 -127.1 123.4 179.2 169.8 8.6 173.2 53 -1.2 53 -3.0 0 0.0 0 0.0 9 36
229 A 408 GLU E - 0 0 -136.0 96.1 -175.5 -175.3 8.3 159.1 0 0.0 0 0.0 0 0.0 0 0.0 13 35
230 A 409 PRO P S S S+ 0 0 -66.4 -37.9 176.4 47.2 79.4 30.4 0 0.0 0 0.0 0 0.0 0 0.0 5 20
231 A 410 LYS K S S S+ 0 0 -69.9 -62.7 177.7 59.3 104.2 1.7 0 0.0 0 0.0 0 0.0 0 0.0 5 20
232 A 411 LEU L S S S- 0 0 -68.0 157.4 -171.0 -114.8 87.9 90.2 0 0.0 0 0.0 0 0.0 0 0.0 7 26
233 A 412 ASN N S S S+ 0 0 -92.9 32.3 174.5 90.3 81.6 88.4 0 0.0 0 0.0 0 0.0 0 0.0 6 25
234 A 413 TYR Y - 0 0 -119.7 149.0 173.0 -163.5 55.7 165.6 0 0.0 0 0.0 0 0.0 0 0.0 6 29
235 A 414 SER S g > > T - 0 0 -125.0 174.5 179.3 -78.1 40.1 143.3 0 0.0 238 -4.5 0 0.0 239 -0.6 9 32
236 A 415 ASP D G G 4 > TS+ 0 0 -34.5 -55.2 -179.5 55.4 124.8 34.5 227 -0.8 239 -3.2 0 0.0 0 0.0 8 35
237 A 416 HIS H G G 4 3 TS+ 0 0 -62.5 -14.9 177.3 62.5 99.8 45.6 0 0.0 0 0.0 0 0.0 0 0.0 5 27
238 A 417 ASP D G G 4 < TS+ 0 0 -82.1 -17.3 -173.6 93.9 86.0 46.3 235 -4.5 0 0.0 0 0.0 0 0.0 7 30
239 A 418 VAL V g < < T - 0 0 -86.0 127.7 177.8 -143.2 69.4 128.4 236 -3.2 241 -0.5 235 -0.6 0 0.0 12 37
240 A 419 ILE I E E Aa - 14 0 -84.5 126.5 -176.0 -170.8 28.2 151.3 13 -2.4 15 -2.3 0 0.0 0 0.0 9 30
241 A 420 LYS K E E Aa + 15 0 -127.5 135.4 -176.5 178.9 12.2 165.2 239 -0.5 0 0.0 0 0.0 0 0.0 9 37
242 A 421 TRP W E E Aa - 16 0 -134.5 155.6 176.6 -166.8 6.9 157.9 15 -2.2 17 -2.8 0 0.0 0 0.0 7 37
243 A 422 VAL V E E Aa - 17 0 -135.3 150.7 174.1 -177.9 4.2 169.3 0 0.0 0 0.0 0 0.0 0 0.0 9 37
244 A 423 ARG R E E Aa - 18 0 -144.8 150.3 -179.3 -150.4 13.4 171.7 17 -1.9 19 -2.4 0 0.0 0 0.0 10 38
245 A 424 TYR Y E E Aa - 19 0 -120.3 129.5 -179.9 -176.4 10.4 163.7 0 0.0 0 0.0 0 0.0 0 0.0 10 45
246 A 425 ILE I E E Aa - 20 0 -127.4 98.6 -177.0 -178.8 6.0 160.2 19 -2.5 21 -1.9 0 0.0 0 0.0 13 44
247 A 426 GLY G E E AaN + 21 213 -99.2 134.2 -175.4 176.8 9.5 152.3 213 -2.8 213 -2.9 0 0.0 0 0.0 15 56
248 A 427 ARG R E E AaN - 22 212 -135.9 153.0 178.2 -102.9 31.0 162.6 21 -3.0 23 -2.9 0 0.0 0 0.0 12 50
249 A 428 SER S E E Aa - 23 0 -77.9 154.2 176.7 -179.7 29.6 111.4 211 -1.7 0 0.0 0 0.0 0 0.0 12 51
250 A 429 GLY G E E A* S- 0 0 -115.5 -114.5 172.5 -9.9 77.9 82.3 23 -1.7 252 -0.8 0 0.0 0 0.0 8 46
251 A 430 ILE I E E A* S+ 0 0 -89.9 113.7 -178.6 168.5 75.5 150.6 0 0.0 25 -2.2 0 0.0 0 0.0 10 41
252 A 431 TYR Y E E Aa + 25 0 -129.4 78.9 -174.7 164.1 14.9 147.7 250 -0.8 209 -2.1 0 0.0 0 0.0 12 53
253 A 432 GLU E E E AaM - 26 208 -108.9 144.8 -179.1 -162.9 27.0 144.3 25 -2.8 27 -2.3 0 0.0 0 0.0 11 48
254 A 433 THR T E E AaM - 27 207 -130.4 117.3 -178.2 -131.6 22.6 169.3 207 -2.8 207 -3.6 0 0.0 0 0.0 13 48
255 A 434 ARG R e 0 0 -69.7 133.9 -177.2 999.9 999.9 119.6 27 -3.9 0 0.0 0 0.0 0 0.0 11 43
256 A 435 CYS C 0 0 -116.9 999.9 999.9 999.9 999.9 92.8 0 0.0 0 0.0 0 0.0 0 0.0 10 44
1i31A.pdb
1I31 ENDOCYTOSIS/EXOCYTOSIS MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand TTS S SS EEEEEEEEEEEEEE SS EEEEEEEEEEEEEEE SSS EEEEEES SEEEE TTSB EEE SEEEEEEEEEE Kabs/Sand
chirality ++--++++-+-+------+---+-+--+-+-+-++--+-----+-+---------+-++ +----------++-- +--+----+-+----+--+ chirality
bends SS S SS SS S SSS S S SSS SS bends
turns TTTT TTTT turns
5-turns 5-turns
3-turns >33< >33< 3-turns
bridge-2 BBBBBBBBBBBBBB CCCCCCCCC EEE A FFFF bridge-2
bridge-1 aaaaaaaaaa*aaa B*BBBBBBBBBBBBB DDDDDD FFFF A EEE CCCC*CCCCC bridge-1
sheets AAAAAAAAAAAAAA AAAAAAAAAAAAAAA BBBBBB AAAA BBB AAAAAAAAAA sheets
4-turns 4-turns
summary tTTt S SSeEEEEEEEEEEEEEEeSS eEEEEEEEEEEEEEEE SSS EEEEEEe SEEEEeTTtB EEE SEEEEEEEEEE summary
sequence IGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIKQSIAIDDCTFHQCVRLSERSISFIPPDGEFELMRYRT sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand SS EEEEEEEEEETTTEEEEEEEEEE S TT EEEEEEEEEE TTEEEEEEE SSSEEEEEGGGTEEEEEEEEEESS EEEEEEEEEE SSS Kabs/Sand
chirality +-+---+-----------++---+------+--++---+++-------+++-----+-+-------++-+------++--++-+----------+--++- chirality
bends SS SSS S SS S SS SSS SSSSS S SS SSS bends
turns TTTTT TTTT TTTT TTTTTT turns
5-turns >5555< 5-turns
3-turns >33< >33< >33< >>3<< 3-turns
bridge-2 HHHHHHHHH J**JJJ LLLLL KKKKKK bridge-2
bridge-1 GGGGGGGGGG GGGGGGGGGG III*IIIIII K*KKKKK LLLLL IIIIII*III HHHHHHHHH bridge-1
sheets CCCCCCCCCC CCCCCCCCCC AAAAAAAAAA CCCCCCC AAAAA AAAAAAAAAA CCCCCCCCCC sheets
4-turns >444< 4-turns
summary SS eEEEEEEEEEETTeEEEEEEEEEEeStTTeEEEEEEEEEEetTeEEEEEEE SSSEEEEEGGGeEEEEEEEEEEeSeEEEEEEEEEEe SSS summary
sequence TKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK sequence
110 120 130 140 150 160 170 180 190 200
author author
Kabs/Sand EEEEEEESS TT EEEEEEE SSSS GGG EEEEEEEEEEEEEEE Kabs/Sand
chirality ---------+---+--+-+-------++-++-+--+++--+-----+---++-- chirality
bends SS SS SSSS SSS SS bends
turns TTTT TTTTT turns
5-turns 5-turns
3-turns >33< >>3<< 3-turns
bridge-2 MM NN NN MM bridge-2
bridge-1 JJJ*J D*DDDDD aaaaaaaaaa**aaa bridge-1
sheets AAAAAAA BBBBBBB AAAAAAAAAAAAAAA sheets
4-turns >444< 4-turns
summary EEEEEEESStTTt eEEEEEEE SSSS gGGGgEEEEEEEEEEEEEEEe summary
sequence KWARPPISMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC sequence
210 220 230 240 250
Messages
chain break between 62(A 220 ) and 63(A 238 )
chain break between 80(A 255 ) and 81(A 260 )