Secondary structure calculation program - copyright by David Keith Smith, 1989
1i07A.pdb
1I07 HORMONE/GROWTH FACTOR MOL_ID: 1; MOL_ID: 1;
Sequence length - 59
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 6 LYS K 0 0 999.9 136.8 179.8 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 4 12
2 A 7 LYS K e - 0 0 -103.8 131.9 -178.8 -171.2 999.9 151.7 0 0.0 28 -2.4 0 0.0 0 0.0 6 15
3 A 8 TYR Y E E AA - 27 0 -127.9 153.6 177.7 -174.4 12.9 154.9 0 0.0 0 0.0 0 0.0 0 0.0 8 17
4 A 9 ALA A E E AA - 26 0 -137.8 157.2 178.8 -137.3 17.6 162.0 26 -2.7 26 -3.2 0 0.0 0 0.0 8 22
5 A 10 LYS K E E AA - 25 0 -119.2 130.9 179.8 -124.3 21.8 165.3 0 0.0 0 0.0 0 0.0 0 0.0 9 22
6 A 11 SER S e - 0 0 -73.9 135.9 -179.8 -165.5 15.5 123.4 24 -2.4 23 -2.9 0 0.0 0 0.0 12 21
7 A 12 LYS K S S S+ 0 0 -92.4 -20.8 -179.0 19.7 72.8 46.4 0 0.0 0 0.0 0 0.0 0 0.0 6 16
8 A 13 TYR Y S S S- 0 0 -139.3 172.9 177.4 -90.5 88.6 148.8 0 0.0 0 0.0 0 0.0 0 0.0 7 17
9 A 14 ASP D - 0 0 -83.2 156.7 178.1 -166.4 35.7 121.4 0 0.0 0 0.0 0 0.0 0 0.0 9 19
10 A 15 PHE F B B A - 20 0 -146.9 125.0 -179.9 -152.4 8.0 164.8 20 -2.4 20 -2.2 0 0.0 12 -0.6 7 21
11 A 16 VAL V - 0 0 -104.7 119.0 -179.7 -128.3 20.7 154.1 0 0.0 0 0.0 0 0.0 0 0.0 7 17
12 A 17 ALA A - 0 0 -63.7 140.5 178.5 -174.3 20.8 112.1 10 -0.6 0 0.0 0 0.0 0 0.0 8 19
13 A 18 ARG R S S S+ 0 0 -112.4 -4.5 -178.2 42.9 72.1 66.8 0 0.0 0 0.0 0 0.0 0 0.0 5 15
14 A 19 ASN N S t > TS- 0 0 -140.1 154.7 178.8 -115.9 85.0 163.9 0 0.0 17 -1.4 0 0.0 0 0.0 5 18
15 A 20 SER S T T 3 TS+ 0 0 -67.5 -12.2 177.9 58.1 116.0 54.1 0 0.0 0 0.0 0 0.0 0 0.0 6 15
16 A 21 SER S T T 3 TS+ 0 0 -91.1 -13.1 179.4 80.4 94.8 54.0 0 0.0 0 0.0 0 0.0 0 0.0 5 20
17 A 22 GLU E S t < TS- 0 0 -91.8 151.3 -179.3 -137.5 76.3 130.8 14 -1.4 19 -0.5 0 0.0 0 0.0 7 23
18 A 23 LEU L - 0 0 -114.0 120.9 178.5 -134.1 12.9 161.7 0 0.0 0 0.0 0 0.0 0 0.0 7 25
19 A 24 SER S - 0 0 -70.8 139.4 178.8 -175.9 30.8 120.7 17 -0.5 0 0.0 0 0.0 0 0.0 8 22
20 A 25 VAL V B B A - 10 0 -138.2 156.3 179.7 -137.8 18.4 162.7 10 -2.2 10 -2.4 0 0.0 0 0.0 9 24
21 A 26 MET M t > T - 0 0 -112.1 152.4 178.0 -86.2 40.0 146.6 0 0.0 24 -2.1 0 0.0 0 0.0 9 18
22 A 27 LYS K T T 3 TS+ 0 0 -54.6 138.4 180.0 21.5 115.6 107.0 0 0.0 0 0.0 0 0.0 0 0.0 9 17
23 A 28 ASP D T T 3 TS+ 0 0 80.5 -0.7 178.4 143.8 86.6 68.1 6 -2.9 0 0.0 0 0.0 0 0.0 8 16
24 A 29 ASP D e < T - 0 0 -68.5 140.6 177.0 -135.2 47.3 118.4 21 -2.1 6 -2.4 0 0.0 26 -0.6 8 20
25 A 30 VAL V E E AA - 5 0 -99.4 121.8 -179.3 -170.5 26.5 151.7 0 0.0 0 0.0 0 0.0 0 0.0 8 21
26 A 31 LEU L E E AA - 4 0 -116.9 146.9 177.8 -129.8 22.2 152.7 4 -3.2 4 -2.7 24 -0.6 0 0.0 8 25
27 A 32 GLU E E E AA - 3 0 -90.9 127.9 -179.7 -134.3 27.3 142.9 0 0.0 0 0.0 0 0.0 0 0.0 8 19
28 A 33 ILE I e - 0 0 -89.0 127.1 -179.0 -160.4 23.2 138.0 2 -2.4 0 0.0 0 0.0 0 0.0 10 20
29 A 34 LEU L g > T + 0 0 -102.9 167.7 179.7 35.8 61.7 124.0 0 0.0 32 -0.9 0 0.0 0 0.0 7 18
30 A 35 ASP D G G > TS- 0 0 61.6 36.0 180.0 -74.3 121.6 34.0 0 0.0 33 -2.2 0 0.0 0 0.0 5 19
31 A 36 ASP D G G 3 TS- 0 0 45.6 40.7 178.9 -61.1 90.2 30.4 0 0.0 0 0.0 0 0.0 0 0.0 5 16
32 A 37 ARG R G G < TS+ 0 0 62.0 25.3 178.8 175.9 82.0 44.3 29 -0.9 0 0.0 0 0.0 0 0.0 6 19
33 A 38 ARG R g < T - 0 0 -59.4 145.6 -178.3 -118.0 30.3 108.6 30 -2.2 0 0.0 0 0.0 0 0.0 7 20
34 A 39 GLN Q e - 0 0 -93.4 136.8 -179.5 -167.3 30.5 136.3 0 0.0 50 -2.4 0 0.0 0 0.0 7 18
35 A 40 TRP W E E BB - 49 0 -122.0 155.2 176.9 -150.2 8.4 148.4 0 0.0 0 0.0 0 0.0 0 0.0 8 23
36 A 41 TRP W E E BB - 48 0 -121.2 150.6 176.8 -123.4 20.5 155.8 48 -2.4 48 -1.8 0 0.0 0 0.0 8 24
37 A 42 LYS K E E BB + 47 0 -89.6 132.4 -178.6 171.1 44.5 143.6 0 0.0 0 0.0 0 0.0 0 0.0 8 27
38 A 43 VAL V E E BB - 46 0 -139.3 168.0 178.0 -139.1 31.3 153.0 46 -3.1 46 -2.3 0 0.0 0 0.0 8 25
39 A 44 ARG R E E BB - 45 0 -131.9 125.4 -178.6 -144.6 23.9 175.2 0 0.0 0 0.0 0 0.0 0 0.0 9 18
40 A 45 ASN N e > T - 0 0 -82.9 180.0 -179.3 -89.5 35.4 99.0 44 -2.1 43 -2.0 0 0.0 0 0.0 7 14
41 A 46 ALA A T T 3 TS+ 0 0 -58.0 -30.7 -179.4 60.2 126.4 37.6 0 0.0 0 0.0 0 0.0 0 0.0 5 9
42 A 47 SER S T T 3 TS- 0 0 -76.2 -7.9 179.3 -112.8 117.6 59.0 0 0.0 0 0.0 0 0.0 0 0.0 5 8
43 A 48 GLY G S t < TS+ 0 0 91.0 -5.0 179.6 138.7 71.1 67.7 40 -2.0 0 0.0 0 0.0 0 0.0 6 10
44 A 49 ASP D e - 0 0 -74.6 148.2 -179.7 -137.3 45.2 116.7 0 0.0 40 -2.1 0 0.0 0 0.0 7 15
45 A 50 SER S E E BB + 39 0 -104.9 150.9 179.7 130.6 37.6 138.9 0 0.0 0 0.0 0 0.0 0 0.0 8 20
46 A 51 GLY G E E BB - 38 0 -177.8 -178.9 179.4 -83.5 48.9 172.2 38 -2.3 38 -3.1 0 0.0 0 0.0 8 23
47 A 52 PHE F E E BB + 37 0 -113.0 134.9 179.5 170.9 35.3 157.4 0 0.0 0 0.0 0 0.0 0 0.0 8 26
48 A 53 VAL V E E BB - 36 0 -137.0 146.0 179.6 -98.4 42.6 168.2 36 -1.8 36 -2.4 0 0.0 0 0.0 8 23
49 A 54 PRO P E E BB > T - 35 0 -64.3 140.4 -178.5 -139.6 30.4 115.3 0 0.0 52 -0.9 0 0.0 0 0.0 10 22
50 A 55 ASN N G e > TS+ 0 0 -81.0 -8.0 -179.4 74.5 89.2 51.4 34 -2.4 53 -0.9 0 0.0 0 0.0 8 20
51 A 56 ASN N G G 3 TS+ 0 0 -86.0 9.1 178.1 56.5 90.3 67.3 0 0.0 0 0.0 0 0.0 0 0.0 5 18
52 A 57 ILE I G G < TS+ 0 0 -114.0 6.3 -178.0 90.3 93.1 72.4 49 -0.9 0 0.0 0 0.0 0 0.0 5 15
53 A 58 LEU L g < T - 0 0 -109.6 145.4 177.2 -152.2 60.1 143.1 50 -0.9 55 -0.5 0 0.0 0 0.0 6 18
54 A 59 ASP D - 0 0 -112.9 122.1 179.3 -125.0 26.7 164.9 0 0.0 0 0.0 0 0.0 0 0.0 4 13
55 A 60 ILE I - 0 0 -62.1 149.1 -180.0 -149.4 25.5 108.0 53 -0.5 0 0.0 0 0.0 0 0.0 4 14
56 A 61 MET M + 0 0 -125.4 140.9 179.3 176.5 17.5 165.6 0 0.0 0 0.0 0 0.0 0 0.0 4 10
57 A 62 ARG R - 0 0 -142.6 151.9 178.0 -130.3 25.6 169.8 0 0.0 0 0.0 0 0.0 0 0.0 4 6
58 A 63 THR T 0 0 -100.6 135.5 179.6 999.9 999.9 148.3 0 0.0 0 0.0 0 0.0 0 0.0 3 5
59 A 64 PRO P 0 0 -59.5 999.9 999.9 999.9 999.9 101.3 0 0.0 0 0.0 0 0.0 0 0.0 2 4
1i07A.pdb
1I07 HORMONE/GROWTH FACTOR MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand EEE SS B SSTTS B TT EEE GGG EEEEE TTS EEEEEGGG Kabs/Sand
chirality -----+-----+-++-----++-----+--+----+---+-+-+-+--+++---+- chirality
bends SS SSSSS SS SSS SSS SSS bends
turns TTTT TTTT TTTTT TTTT TTTTT turns
5-turns 5-turns
3-turns >33< >33< >>3<< >33< >>3<< 3-turns
bridge-2 bridge-2
bridge-1 AAA A A AAA BBBBB BBBBB bridge-1
sheets AAA AAA BBBBB BBBBB sheets
4-turns 4-turns
summary eEEEeSS B StTTt BtTTeEEEegGGGgeEEEEEeTTteEEEEEeGGg summary
sequence KKYAKSKYDFVARNSSELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDIMRTP sequence
10 20 30 40 50