Secondary structure calculation program - copyright by David Keith Smith, 1989
 1h7cA.pdb                                                   
 1H7C  CHAPERONE  MOL_ID: 1;  MOL_ID: 1;  
 Sequence length -   99
             A       A K K                                                                        hydrogen bonding             Ooi's
 strk chain/ l amino u & S structure   bridge        dihedral angles                     donor    acceptor   donor    acceptor  N  N
 num  seq.no t acids t S + patterns   partners    phi    psi  omega  alpha kappa   tco to/energy fr/energy to/energy fr/energy  8 14
    1 A   4    PRO P     h >     T      0    0  999.9  -51.3  179.8  999.9 999.9 999.9    0  0.0    5 -1.3    0  0.0    0  0.0  4 16
    2 A   5    ARG R   H H >     T +    0    0  -72.0  -25.8  179.7   60.3 999.9  40.2    0  0.0    6 -1.7    0  0.0    0  0.0  5 29
    3 A   6    VAL V   H H >     TS+    0    0  -67.4  -41.1  179.3   55.5  99.9  24.8    0  0.0    7 -2.5    0  0.0    0  0.0  9 30
    4 A   7    ARG R   H H >     TS+    0    0  -55.9  -47.5 -179.3   50.0 107.0  22.0    0  0.0    8 -2.6    0  0.0    0  0.0  7 23
    5 A   8    GLN Q   H H X     TS+    0    0  -60.6  -39.7 -179.9   53.0 108.4  28.3    1 -1.3    9 -2.7    0  0.0    0  0.0  8 33
    6 A   9    ILE I   H H X     TS+    0    0  -61.4  -48.3 -179.5   46.6 110.5  20.9    2 -1.7   10 -1.9    0  0.0    0  0.0 14 41
    7 A  10    LYS K   H H X     TS+    0    0  -60.8  -47.2  179.6   48.0 113.9  21.8    3 -2.5   11 -2.3    0  0.0    0  0.0 11 36
    8 A  11    ILE I   H H X     TS+    0    0  -59.3  -51.2 -179.8   47.5 112.7  19.0    4 -2.6   12 -2.0    0  0.0    0  0.0  8 31
    9 A  12    LYS K   H H X     TS+    0    0  -62.0  -31.0  178.1   51.9 111.0  35.3    5 -2.7   13 -1.9    0  0.0    0  0.0 10 41
   10 A  13    THR T   H H X     TS+    0    0  -70.8  -39.7  179.2   52.1 108.3  23.9    6 -1.9   14 -2.5    0  0.0    0  0.0 11 43
   11 A  14    GLY G   H H X     TS+    0    0  -62.0  -36.5  179.5   53.0 107.1  29.9    7 -2.3   15 -2.0    0  0.0    0  0.0  8 36
   12 A  15    VAL V   H H X     TS+    0    0  -64.8  -45.8  179.5   47.8 109.4  21.3    8 -2.0   16 -2.3    0  0.0    0  0.0  9 39
   13 A  16    VAL V   H H X     TS+    0    0  -61.6  -44.8  179.5   53.7 109.4  21.9    9 -1.9   17 -2.4    0  0.0    0  0.0 13 46
   14 A  17    ARG R   H H X     TS+    0    0  -55.7  -44.8 -179.5   47.3 110.3  23.8   10 -2.5   18 -2.0    0  0.0    0  0.0  9 39
   15 A  18    ARG R   H H X     TS+    0    0  -64.8  -41.4 -179.8   49.1 112.0  24.9   11 -2.0   19 -2.1    0  0.0    0  0.0  8 31
   16 A  19    LEU L   H H X     TS+    0    0  -68.1  -32.1  178.5   54.4 108.5  34.1   12 -2.3   20 -2.0    0  0.0    0  0.0 11 36
   17 A  20    VAL V   H H X     TS+    0    0  -67.2  -43.8  180.0   45.8 110.3  22.7   13 -2.4   21 -2.4    0  0.0    0  0.0 10 38
   18 A  21    LYS K   H H <     TS+    0    0  -67.0  -39.2  179.7   52.2 111.2  26.4   14 -2.0    0  0.0    0  0.0    0  0.0  7 29
   19 A  22    GLU E   H H <     TS+    0    0  -62.6  -42.4  178.9   49.4 110.0  22.3   15 -2.1    0  0.0    0  0.0    0  0.0  8 29
   20 A  23    ARG R   H H <     T      0    0  -61.0  -47.5  179.1  999.9 999.9  20.1   16 -2.0   23 -2.8    0  0.0    0  0.0 10 33
   21!A  24    VAL V     h <     T      0    0  -57.1  999.9  999.9  999.9 999.9  20.0   17 -2.4   24 -2.7    0  0.0    0  0.0  7 29
   22!A  26    TYR Y     h >     T      0    0  999.9  -45.2 -179.5  999.9 999.9 999.9    0  0.0   26 -3.0    0  0.0    0  0.0 10 29
   23 A  27    GLU E   H H >     T +    0    0  -61.9  -40.7  179.4   47.4 999.9  26.2   20 -2.8   27 -2.5    0  0.0    0  0.0 10 28
   24 A  28    LYS K   H H >     TS+    0    0  -65.0  -48.3  180.0   46.2 114.7  19.1   21 -2.7   28 -2.3    0  0.0    0  0.0  7 24
   25 A  29    GLU E   H H >     TS+    0    0  -60.4  -46.0 -179.3   45.5 115.7  23.4    0  0.0   29 -2.1    0  0.0    0  0.0 10 26
   26 A  30    ALA A   H H X     TS+    0    0  -66.2  -41.0  179.9   52.2 111.6  26.3   22 -3.0   30 -2.5    0  0.0    0  0.0 12 28
   27 A  31    LYS K   H H X     TS+    0    0  -60.5  -46.4 -179.3   47.8 110.9  22.1   23 -2.5   31 -2.0    0  0.0    0  0.0  8 24
   28 A  32    GLN Q   H H X     TS+    0    0  -62.9  -43.3 -179.2   45.0 114.4  25.7   24 -2.3   32 -1.6    0  0.0    0  0.0  8 24
   29 A  33    GLN Q   H H X     TS+    0    0  -71.8  -34.4  179.1   52.9 111.3  31.4   25 -2.1   33 -2.0    0  0.0    0  0.0 11 28
   30 A  34    GLU E   H H X     TS+    0    0  -68.0  -36.2  178.9   52.6 107.2  28.5   26 -2.5   34 -2.9    0  0.0    0  0.0  9 31
   31 A  35    GLU E   H H X     TS+    0    0  -63.7  -40.3  180.0   50.9 108.5  25.5   27 -2.0   35 -2.5    0  0.0    0  0.0  8 24
   32 A  36    LYS K   H H <     TS+    0    0  -64.1  -39.8  178.9   47.4 111.6  27.6   28 -1.6    0  0.0    0  0.0    0  0.0  7 30
   33 A  37    ILE I   H H <     TS+    0    0  -67.1  -44.6  179.6   50.4 111.1  23.0   29 -2.0    0  0.0    0  0.0    0  0.0 10 30
   34 A  38    GLU E   H H <     T      0    0  -60.1  -40.3  179.7  999.9 999.9  24.6   30 -2.9   37 -1.4    0  0.0    0  0.0  7 24
   35!A  39    LYS K     h <     T      0    0  -63.6  999.9  999.9  999.9 999.9  28.3   31 -2.5    0  0.0    0  0.0    0  0.0  7 20
   36!A  41    ARG R     t >     T      0    0  999.9  -26.8  179.0  999.9 999.9 999.9    0  0.0   40 -1.2    0  0.0    0  0.0 10 20
   37 A  42    ALA A   T T 4     T +    0    0  -73.5  -16.6 -179.8   40.4 999.9  46.5   34 -1.4    0  0.0    0  0.0    0  0.0  6 14
   38 A  43    GLU E   T T 4     TS-    0    0  -94.0  -71.2  179.5   -4.8 142.7  24.9    0  0.0    0  0.0    0  0.0    0  0.0  5 14
   39 A  44    ASP D   T T 4     TS-    0    0 -115.7   27.1  178.3 -145.0  93.2  89.0    0  0.0    0  0.0    0  0.0    0  0.0  6 15
   40 A  45    GLY G     t <     T -    0    0   48.7 -148.4 -179.6   -1.5  61.0  88.4   36 -1.2   42 -1.1    0  0.0    0  0.0  6 18
   41 A  46    GLU E   S S        S+    0    0  -78.6  100.1  179.8  131.0  92.2 130.4    0  0.0    0  0.0    0  0.0    0  0.0  6 18
   42 A  47    ASN N     t     > T -    0    0 -142.0  179.4 -178.4  -71.5  69.1 146.8   40 -1.1   45 -2.1    0  0.0    0  0.0  8 18
   43 A  48    TYR Y   T h >   > TS+    0    0  -40.2  -55.3 -177.8   59.9 118.7  34.4    0  0.0   46 -2.1    0  0.0   47 -0.6  6 14
   44 A  49    ASP D   H H >   3 TS+    0    0  -54.9  -19.1  179.7   71.0  91.8  46.5    0  0.0   48 -1.4    0  0.0    0  0.0  6 22
   45 A  50    ILE I   H H >   < TS+    0    0  -67.5  -30.9 -179.5   65.5  87.1  33.6   42 -2.1   49 -2.5    0  0.0    0  0.0 10 24
   46 A  51    LYS K   H H >   < TS+    0    0  -56.7  -49.4  179.2   46.2 102.1  22.0   43 -2.1   50 -1.9    0  0.0    0  0.0  8 21
   47 A  52    LYS K   H H X     TS+    0    0  -59.6  -46.0 -179.1   48.1 114.2  22.5   43 -0.6   51 -1.8    0  0.0    0  0.0  8 20
   48 A  53    GLN Q   H H X     TS+    0    0  -65.1  -34.1  179.4   55.2 108.1  32.4   44 -1.4   52 -2.5    0  0.0    0  0.0 10 29
   49 A  54    ALA A   H H X     TS+    0    0  -66.4  -38.1  179.5   52.5 105.6  28.7   45 -2.5   53 -2.7    0  0.0    0  0.0  9 28
   50 A  55    GLU E   H H X     TS+    0    0  -62.4  -45.3  179.9   46.5 111.1  21.8   46 -1.9   54 -1.2    0  0.0    0  0.0  8 21
   51 A  56    ILE I   H H <     TS+    0    0  -63.1  -44.0  179.3   51.6 112.1  23.6   47 -1.8    0  0.0    0  0.0    0  0.0  9 25
   52 A  57    LEU L   H H X   > TS+    0    0  -59.6  -47.8 -178.4   55.7 104.4  21.7   48 -2.5   56 -2.7    0  0.0   55 -1.8 12 27
   53 A  58    GLN Q   H H <   3 TS+    0    0  -57.2  -31.6 -179.7   75.0  90.1  34.6   49 -2.7    0  0.0    0  0.0    0  0.0  8 26
   54 A  59    GLU E   T h <   3 TS+    0    0  -51.4  -30.8  178.9   17.2 117.5  37.0   50 -1.2    0  0.0    0  0.0    0  0.0  6 25
   55 A  60    SER S   T T 4   < T      0    0 -107.2  -48.3 -177.8  999.9 999.9  38.3   52 -1.8    0  0.0    0  0.0    0  0.0 10 30
   56!A  61    ARG R     t <     T      0    0  -57.2  999.9  999.9  999.9 999.9  34.6   52 -2.7    0  0.0    0  0.0    0  0.0  9 29
   57!A  64    ILE I     h >     T      0    0  999.9  -49.9  179.9  999.9 999.9 999.9    0  0.0   61 -2.6    0  0.0    0  0.0  9 28
   58 A  65    PRO P   H H >     T +    0    0  -55.2  -44.7 -179.7   45.5 999.9  22.8    0  0.0   62 -2.1    0  0.0    0  0.0  5 21
   59 A  66    ASP D   H H >     TS+    0    0  -64.5  -41.9  179.9   52.6 111.4  27.2    0  0.0   63 -2.7    0  0.0    0  0.0  6 25
   60 A  67  A CYS C   H H >     TS+    0    0  -61.7  -42.5  179.6   48.9 109.7  24.7    0  0.0   64 -2.5    0  0.0    0  0.0 10 30
   61 A  68    GLN Q   H H X     TS+    0    0  -63.9  -41.8  179.5   49.6 111.5  25.1   57 -2.6   65 -2.6    0  0.0    0  0.0  9 30
   62 A  69    ARG R   H H X     TS+    0    0  -62.7  -47.2  179.8   46.5 112.5  21.7   58 -2.1   66 -2.1    0  0.0    0  0.0  8 25
   63 A  70    ARG R   H H X     TS+    0    0  -62.2  -43.6 -179.9   49.6 113.3  23.4   59 -2.7   67 -2.5    0  0.0    0  0.0  9 30
   64 A  71    LEU L   H H X     TS+    0    0  -62.1  -45.8  179.7   49.3 110.2  22.5   60 -2.5   68 -2.5    0  0.0    0  0.0 11 37
   65 A  72    GLU E   H H X     TS+    0    0  -60.7  -40.7 -180.0   48.6 112.7  27.1   61 -2.6   69 -2.7    0  0.0    0  0.0  8 34
   66 A  73    ALA A   H H X     TS+    0    0  -65.9  -45.3 -179.8   45.0 113.6  22.8   62 -2.1   70 -2.3    0  0.0    0  0.0  8 29
   67 A  74    ALA A   H H X     TS+    0    0  -67.2  -34.1  179.6   52.1 113.8  32.2   63 -2.5   71 -2.4    0  0.0    0  0.0 11 40
   68 A  75    TYR Y   H H X     TS+    0    0  -66.2  -51.4 -179.5   43.5 112.1  16.1   64 -2.5   72 -2.6    0  0.0    0  0.0 11 44
   69 A  76    LEU L   H H X     TS+    0    0  -62.6  -37.9 -179.9   52.9 113.7  29.2   65 -2.7   73 -2.3    0  0.0    0  0.0  8 33
   70 A  77    ASP D   H H X     TS+    0    0  -64.0  -49.3  179.6   43.0 112.0  19.2   66 -2.3   74 -2.4    0  0.0    0  0.0  8 35
   71 A  78    LEU L   H H X     TS+    0    0  -64.3  -38.6  179.5   53.6 113.1  27.1   67 -2.4   75 -2.4    0  0.0    0  0.0 13 47
   72 A  79    GLN Q   H H X     TS+    0    0  -61.9  -41.3  179.9   48.2 109.8  24.7   68 -2.6   76 -2.0    0  0.0    0  0.0 10 42
   73 A  80    ARG R   H H X     TS+    0    0  -65.5  -44.3  179.9   51.8 109.8  23.6   69 -2.3   77 -2.1    0  0.0    0  0.0  8 29
   74 A  81    ILE I   H H X     TS+    0    0  -60.4  -45.1  179.1   47.1 111.0  23.0   70 -2.4   78 -0.5    0  0.0    0  0.0  9 38
   75 A  82    LEU L   H H <   > TS+    0    0  -63.9  -38.7  180.0   49.5 113.3  26.5   71 -2.4   78 -0.7    0  0.0    0  0.0 12 39
   76 A  83    GLU E   H H <   3 TS+    0    0  -69.6  -29.9 -178.6   46.4 112.9  34.5   72 -2.0    0  0.0    0  0.0    0  0.0  7 29
   77 A  84    ASN N   H H <   3 TS+    0    0  -93.5    2.2 -179.6   49.9 113.2  65.8   73 -2.1    0  0.0    0  0.0    0  0.0  6 21
   78 A  85    GLU E     h <   X T +    0    0 -134.3   48.5 -178.7  147.5  60.7 108.1   75 -0.7   81 -2.2   74 -0.5    0  0.0  8 28
   79 A  86    LYS K   G G     > T +    0    0  -59.2  -20.3  179.9   75.2  63.1  46.1    0  0.0   82 -1.5    0  0.0    0  0.0  7 22
   80 A  87    ASP D   G G     3 TS+    0    0  -69.0  -10.7 -179.7   51.1  95.4  51.5    0  0.0    0  0.0    0  0.0    0  0.0  5 19
   81 A  88    LEU L   G G     X TS+    0    0 -106.4    5.0 -178.3  115.2  71.5  70.2   78 -2.2   84 -2.8    0  0.0    0  0.0  8 27
   82 A  89    GLU E   T g     < TS+    0    0  -50.5  -19.8 -179.7   56.6  74.0  48.9   79 -1.5    0  0.0    0  0.0    0  0.0  9 26
   83 A  90    GLU E   T T     3 TS+    0    0  -90.6   -9.9  179.7  108.0  82.0  54.5    0  0.0    0  0.0    0  0.0    0  0.0  7 21
   84 A  91    ALA A   S h >   < TS-    0    0  -68.9  141.4  179.7 -128.6  74.9 114.2   81 -2.8   88 -2.2    0  0.0    0  0.0  7 25
   85 A  92    GLU E   H H >     TS+    0    0  -56.4  -43.0 -180.0   52.7 110.0  26.6    0  0.0   89 -2.4    0  0.0    0  0.0  6 24
   86 A  93    GLU E   H H >     TS+    0    0  -63.2  -34.6  179.5   51.9 107.7  31.4    0  0.0   90 -2.5    0  0.0    0  0.0  9 35
   87 A  94    TYR Y   H H >     TS+    0    0  -67.5  -46.6  179.6   44.9 111.9  21.1    0  0.0   91 -2.1    0  0.0    0  0.0 14 38
   88 A  95    LYS K   H H X     TS+    0    0  -65.4  -35.1  178.6   51.3 113.7  29.5   84 -2.2   92 -1.6    0  0.0    0  0.0 10 33
   89 A  96    GLU E   H H X     TS+    0    0  -65.5  -44.7 -179.1   51.9 108.4  22.4   85 -2.4   93 -2.0    0  0.0    0  0.0  8 33
   90 A  97    ALA A   H H X     TS+    0    0  -59.3  -42.8  179.6   52.7 106.7  26.5   86 -2.5   94 -2.5    0  0.0    0  0.0 12 46
   91 A  98    ARG R   H H X     TS+    0    0  -61.1  -39.1 -179.8   53.1 107.2  27.4   87 -2.1   95 -2.3    0  0.0    0  0.0 10 42
   92 A  99    LEU L   H H X     TS+    0    0  -63.2  -43.2  179.4   47.5 110.0  23.3   88 -1.6   96 -1.2    0  0.0    0  0.0  8 32
   93 A 100    VAL V   H H X     TS+    0    0  -63.7  -46.5 -179.7   50.4 111.2  21.8   89 -2.0   97 -1.2    0  0.0    0  0.0 11 38
   94 A 101    LEU L   H H X   > TS+    0    0  -57.4  -45.9 -177.4   47.6 111.8  22.0   90 -2.5   98 -1.7    0  0.0   97 -0.7 12 40
   95 A 102  A ASP D   H H X   3 TS+    0    0  -71.6  -20.4  178.0   58.7 105.4  42.7   91 -2.3   99 -2.0    0  0.0    0  0.0  8 27
   96 A 103    SER S   H H <   3 TS+    0    0  -77.5  -22.8  178.8   52.6 104.7  41.7   92 -1.2    0  0.0    0  0.0    0  0.0  7 29
   97 A 104    VAL V   H H <   < TS+    0    0  -75.1  -43.2 -179.7   48.8 109.0  26.6   93 -1.2    0  0.0   94 -0.7    0  0.0  8 36
   98 A 105    LYS K   H H <     T      0    0  -62.4  -46.7  179.8  999.9 999.9  22.9   94 -1.7    0  0.0    0  0.0    0  0.0  5 24
   99 A 106    LEU L     h <     T      0    0  -63.3  999.9  999.9  999.9 999.9  14.4   95 -2.0    0  0.0    0  0.0    0  0.0  4 15
 
 1h7cA.pdb                                                   
 1H7C  CHAPERONE  MOL_ID: 1;  MOL_ID: 1;  
 
    author                                                                                                       author   
 Kabs/Sand   HHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHH  TTT S THHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHH GGGTTSHHHHHHHHHHHHHH   Kabs/Sand
 chirality   ++++++++++++++++++   +++++++++++   +---+-++++++++++++   ++++++++++++++++++++++++++-+++++++++++++    chirality
     bends    SSSSSSSSSSSSSSSSS    SSSSSSSSSS    SS S SSSSSSSSSSSS    SSSSSSSSSSSSSSSSSSS  SSSSSSSSSSSSSSSSSS    bends    
     turns  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  turns    
   5-turns                                                                                                       5-turns  
   3-turns                                           >>3<<     >33<                   >33X>3X<3<         >33<    3-turns  
  bridge-2                                                                                                       bridge-2 
  bridge-1                                                                                                       bridge-1 
    sheets                                                                                                       sheets   
   4-turns  >>>>XXXXXXXXXXXXX<<<<>>>>XXXXXX<<<<>444<  >>>>XXXX>>>XXXXXXXXXXXXXX<<<<     >>>>XXXXXXXX<<<<  4-turns  
   summary  hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhtTTTtSthHHHHHHHHHHhTthHHHHHHHHHHHHHHHHHHHHhGGGgThHHHHHHHHHHHHHHh  summary  
  sequence  PRVRQIKIKTGVVRRLVKERVYEKEAKQQEEKIEKRAEDGENYDIKKQAEILQESRIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKL  sequence 
                    10        20        30        40        50        60        70        80        90
 
 
 
 
 Messages
 chain break between   21(A  24 ) and   22(A  26 )                               
 chain break between   35(A  39 ) and   36(A  41 )                               
 chain break between   56(A  61 ) and   57(A  64 )