Secondary structure calculation program - copyright by David Keith Smith, 1989
1cxzB.pdb
1CXZ SIGNALING PROTEIN MOL_ID: 1; MOL_ID: 1;
Sequence length - 86
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 B 13 TRP W 0 0 999.9 -41.8 -178.1 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 4 22
2 B 14 SER S h > T - 0 0 -42.9 122.6 179.6 -151.6 999.9 95.6 0 0.0 6 -1.9 0 0.0 0 0.0 7 28
3 B 15 LEU L H H > TS+ 0 0 -68.6 -26.9 178.4 55.4 99.5 39.0 0 0.0 7 -1.7 0 0.0 0 0.0 8 36
4 B 16 LEU L H H 4 >TS+ 0 0 -70.8 -39.7 178.6 46.9 108.8 27.6 0 0.0 9 -2.7 0 0.0 10 -0.8 8 36
5 B 17 GLU E H H 4 >5TS+ 0 0 -68.6 -35.5 179.4 52.9 110.7 33.5 0 0.0 8 -0.7 0 0.0 0 0.0 9 21
6 B 18 GLN Q H H < 35TS+ 0 0 -67.2 -38.1 -179.5 45.4 111.9 28.8 2 -1.9 0 0.0 0 0.0 0 0.0 8 21
7 B 19 LEU L T h < 35TS- 0 0 -87.8 4.9 179.9 -117.5 112.9 71.0 3 -1.7 0 0.0 0 0.0 0 0.0 7 28
8 B 20 GLY G T T <5TS+ 0 0 65.4 21.7 180.0 117.6 84.8 43.9 5 -0.7 0 0.0 0 0.0 0 0.0 6 19
9 B 21 LEU L t > T - 0 0 -79.7 101.0 -178.3 -174.8 40.8 137.4 0 0.0 16 -0.8 0 0.0 0 0.0 6 22
14 B 26 LEU L T T 3 TS+ 0 0 -76.2 -13.9 179.2 68.6 74.4 51.1 12 -1.1 0 0.0 0 0.0 0 0.0 8 28
15 B 27 ALA A T T 3 TS+ 0 0 -78.7 -16.3 179.1 111.5 75.1 48.3 0 0.0 0 0.0 0 0.0 0 0.0 8 21
16 B 28 ALA A S h > < TS- 0 0 -58.3 144.7 -179.7 -118.6 78.6 104.4 13 -0.8 20 -2.6 0 0.0 0 0.0 7 17
17 B 29 PRO P H H > TS+ 0 0 -53.0 -46.3 -180.0 49.0 110.3 31.3 0 0.0 21 -1.4 0 0.0 0 0.0 6 16
18 B 30 GLY G H H > TS+ 0 0 -61.6 -49.8 179.6 44.7 114.3 18.1 0 0.0 22 -2.2 0 0.0 0 0.0 6 19
19 B 31 VAL V H H > TS+ 0 0 -60.8 -42.1 179.6 55.6 110.4 26.0 0 0.0 23 -2.5 0 0.0 0 0.0 10 28
20 B 32 GLN Q H H X TS+ 0 0 -61.9 -31.5 179.0 45.7 110.4 38.7 16 -2.6 24 -1.3 0 0.0 0 0.0 11 27
21 B 33 GLN Q H H X TS+ 0 0 -78.8 -40.3 179.5 51.9 110.8 30.4 17 -1.4 25 -2.0 0 0.0 0 0.0 8 24
22 B 34 GLN Q H H X TS+ 0 0 -63.2 -38.1 179.8 49.1 111.1 28.2 18 -2.2 26 -2.0 0 0.0 0 0.0 8 32
23 B 35 LEU L H H X TS+ 0 0 -70.4 -38.3 178.6 52.6 107.6 28.5 19 -2.5 27 -2.5 0 0.0 0 0.0 10 38
24 B 36 GLU E H H X TS+ 0 0 -63.8 -37.4 178.7 50.1 110.4 26.6 20 -1.3 28 -2.0 0 0.0 0 0.0 9 31
25 B 37 LEU L H H X TS+ 0 0 -65.1 -43.1 179.0 49.6 110.3 24.1 21 -2.0 29 -2.4 0 0.0 0 0.0 8 27
26 B 38 GLU E H H X TS+ 0 0 -63.9 -38.4 179.0 51.3 109.3 30.0 22 -2.0 30 -2.9 0 0.0 0 0.0 8 38
27 B 39 ARG R H H X TS+ 0 0 -66.4 -38.7 178.8 49.7 110.2 26.1 23 -2.5 31 -2.5 0 0.0 0 0.0 10 34
28 B 40 GLU E H H X TS+ 0 0 -64.1 -44.9 179.5 49.3 111.3 20.9 24 -2.0 32 -2.1 0 0.0 0 0.0 8 26
29 B 41 ARG R H H X TS+ 0 0 -57.2 -54.8 179.6 48.3 111.7 15.1 25 -2.4 33 -2.6 0 0.0 0 0.0 8 30
30 B 42 LEU L H H X TS+ 0 0 -53.7 -43.8 179.4 53.3 109.1 28.4 26 -2.9 34 -2.5 0 0.0 0 0.0 11 32
31 B 43 ARG R H H X TS+ 0 0 -60.5 -40.1 179.3 46.6 111.2 26.8 27 -2.5 35 -1.9 0 0.0 0 0.0 9 29
32 B 44 ARG R H H X TS+ 0 0 -69.2 -37.9 179.2 52.2 110.9 26.8 28 -2.1 36 -2.2 0 0.0 0 0.0 8 23
33 B 45 GLU E H H X TS+ 0 0 -62.8 -44.5 179.7 49.8 109.4 26.8 29 -2.6 37 -2.5 0 0.0 0 0.0 9 30
34 B 46 ILE I H H X TS+ 0 0 -61.4 -45.4 179.1 49.5 110.5 26.6 30 -2.5 38 -2.5 0 0.0 0 0.0 11 31
35 B 47 ARG R H H X TS+ 0 0 -63.0 -40.6 179.7 47.8 112.6 25.8 31 -1.9 39 -1.9 0 0.0 0 0.0 8 25
36 B 48 LYS K H H X TS+ 0 0 -66.7 -43.8 179.7 46.9 113.3 23.0 32 -2.2 40 -2.1 0 0.0 0 0.0 8 27
37 B 49 GLU E H H X TS+ 0 0 -64.6 -39.4 179.1 55.9 109.3 27.8 33 -2.5 41 -2.3 0 0.0 0 0.0 11 29
38 B 50 LEU L H H X TS+ 0 0 -59.0 -44.9 -179.7 43.6 110.7 25.6 34 -2.5 42 -1.9 0 0.0 0 0.0 9 29
39 B 51 LYS K H H X TS+ 0 0 -71.9 -34.8 178.4 53.6 111.2 31.6 35 -1.9 43 -2.2 0 0.0 0 0.0 8 24
40 B 52 LEU L H H X TS+ 0 0 -66.2 -38.1 179.1 50.5 109.6 26.8 36 -2.1 44 -2.5 0 0.0 0 0.0 9 28
41 B 53 LYS K H H X TS+ 0 0 -65.2 -45.5 179.7 48.5 109.7 23.4 37 -2.3 45 -1.9 0 0.0 0 0.0 11 31
42 B 54 GLU E H H X TS+ 0 0 -63.0 -37.1 178.4 47.5 114.0 26.7 38 -1.9 46 -1.5 0 0.0 0 0.0 8 25
43 B 55 GLY G H H X TS+ 0 0 -69.8 -38.4 179.9 54.3 108.7 27.6 39 -2.2 47 -2.0 0 0.0 0 0.0 8 25
44 B 56 ALA A H H X TS+ 0 0 -64.9 -31.9 178.4 53.8 105.3 35.1 40 -2.5 48 -2.4 0 0.0 0 0.0 11 29
45 B 57 GLU E H H X TS+ 0 0 -69.0 -38.1 178.5 51.4 107.1 27.0 41 -1.9 49 -2.3 0 0.0 0 0.0 9 29
46 B 58 ASN N H H X TS+ 0 0 -63.8 -40.5 179.4 47.5 111.4 25.5 42 -1.5 50 -2.3 0 0.0 0 0.0 8 22
47 B 59 LEU L H H X TS+ 0 0 -67.2 -42.7 179.8 54.7 108.2 26.6 43 -2.0 51 -3.1 0 0.0 0 0.0 9 28
48 B 60 ARG R H H X TS+ 0 0 -57.8 -42.4 178.9 44.4 112.2 23.2 44 -2.4 52 -1.7 0 0.0 0 0.0 11 27
49 B 61 ARG R H H X TS+ 0 0 -69.2 -38.8 179.4 50.2 113.4 25.8 45 -2.3 53 -1.5 0 0.0 0 0.0 8 23
50 B 62 ALA A H H X TS+ 0 0 -65.7 -38.1 179.8 49.6 110.7 28.1 46 -2.3 54 -0.9 0 0.0 0 0.0 8 21
51 B 63 THR T H H X >TS+ 0 0 -69.0 -33.2 178.9 58.7 105.2 32.9 47 -3.1 56 -2.0 0 0.0 55 -0.9 11 22
52 B 64 THR T H H < 5TS+ 0 0 -63.4 -38.4 -180.0 45.7 107.9 28.8 48 -1.7 0 0.0 0 0.0 0 0.0 10 18
53 B 65 ASP D H H < 5TS+ 0 0 -78.5 -20.9 179.5 55.8 108.4 47.7 49 -1.5 0 0.0 0 0.0 0 0.0 7 14
54 B 66 LEU L H H < 5TS- 0 0 -83.6 -16.4 -179.8 -123.3 111.4 50.7 50 -0.9 0 0.0 0 0.0 0 0.0 6 14
55 B 67 GLY G T h < 5T + 0 0 76.0 39.1 -179.6 130.9 64.9 29.7 51 -0.9 0 0.0 0 0.0 0 0.0 6 14
56 B 68 ARG R t T + 0 0 -93.6 -4.9 180.0 96.7 66.4 62.1 0 0.0 62 -2.9 0 0.0 0 0.0 9 22
59 B 71 GLY G H H > TS+ 0 0 -50.4 -58.0 179.9 46.6 82.8 21.0 0 0.0 63 -2.3 0 0.0 0 0.0 6 21
60 B 72 PRO P H H > TS+ 0 0 -53.4 -47.5 -179.4 45.0 116.3 24.3 0 0.0 64 -1.9 0 0.0 0 0.0 7 23
61 B 73 VAL V H H > TS+ 0 0 -65.3 -42.0 178.8 52.8 111.2 27.8 0 0.0 65 -2.7 0 0.0 0 0.0 10 29
62 B 74 GLU E H H X TS+ 0 0 -61.1 -38.4 179.5 51.0 109.0 27.4 58 -2.9 66 -2.1 0 0.0 0 0.0 9 27
63 B 75 LEU L H H X TS+ 0 0 -66.6 -40.4 178.8 47.7 110.5 25.4 59 -2.3 67 -2.3 0 0.0 0 0.0 8 22
64 B 76 LEU L H H X TS+ 0 0 -65.3 -43.6 179.1 53.3 110.0 23.2 60 -1.9 68 -2.2 0 0.0 0 0.0 9 29
65 B 77 LEU L H H X TS+ 0 0 -57.5 -42.9 178.5 46.0 111.4 27.8 61 -2.7 69 -2.0 0 0.0 0 0.0 11 32
66 B 78 ARG R H H X TS+ 0 0 -67.8 -41.6 179.5 50.7 111.6 27.0 62 -2.1 70 -2.1 0 0.0 0 0.0 8 27
67 B 79 GLY G H H X TS+ 0 0 -64.7 -31.8 -179.7 51.5 110.7 31.7 63 -2.3 71 -1.7 0 0.0 0 0.0 8 28
68 B 80 SER S H H X TS+ 0 0 -72.4 -41.2 178.8 45.5 110.6 27.7 64 -2.2 72 -2.1 0 0.0 0 0.0 11 31
69 B 81 SER S H H X TS+ 0 0 -70.2 -31.9 -180.0 53.5 112.3 34.5 65 -2.0 73 -1.6 0 0.0 0 0.0 9 29
70 B 82 ARG R H H X TS+ 0 0 -69.8 -36.9 179.1 48.3 109.1 29.4 66 -2.1 74 -1.7 0 0.0 0 0.0 8 24
71 B 83 ARG R H H X TS+ 0 0 -69.8 -42.7 178.9 53.3 108.4 23.5 67 -1.7 75 -2.6 0 0.0 0 0.0 9 31
72 B 84 LEU L H H X TS+ 0 0 -59.0 -35.6 178.8 55.5 106.6 29.5 68 -2.1 76 -1.8 0 0.0 0 0.0 11 32
73 B 85 ASP D H H X TS+ 0 0 -61.4 -50.0 -179.6 45.3 108.3 20.5 69 -1.6 77 -1.8 0 0.0 0 0.0 8 28
74 B 86 LEU L H H X TS+ 0 0 -61.8 -43.9 179.6 53.4 111.3 23.1 70 -1.7 78 -2.3 0 0.0 0 0.0 8 33
75 B 87 LEU L H H X TS+ 0 0 -61.5 -33.9 179.1 49.2 109.8 33.0 71 -2.6 79 -1.9 0 0.0 0 0.0 11 35
76 B 88 HIS H H H X TS+ 0 0 -75.5 -32.6 179.0 51.9 108.5 33.4 72 -1.8 80 -1.7 0 0.0 0 0.0 9 32
77 B 89 GLN Q H H X TS+ 0 0 -67.9 -44.3 -179.9 43.4 114.1 23.4 73 -1.8 81 -2.0 0 0.0 0 0.0 8 29
78 B 90 GLN Q H H X TS+ 0 0 -68.3 -41.4 179.5 50.3 113.4 27.9 74 -2.3 82 -1.4 0 0.0 0 0.0 11 38
79 B 91 LEU L H H X TS+ 0 0 -65.1 -35.4 179.4 50.2 111.5 30.2 75 -1.9 83 -1.1 0 0.0 0 0.0 11 37
80 B 92 GLN Q H H X TS+ 0 0 -68.5 -41.7 179.2 54.9 106.7 27.0 76 -1.7 84 -0.9 0 0.0 0 0.0 8 28
81 B 93 GLU E H H < TS+ 0 0 -62.1 -31.9 -179.9 46.1 110.4 36.9 77 -2.0 0 0.0 0 0.0 0 0.0 10 34
82 B 94 LEU L H H < > TS+ 0 0 -86.4 -20.3 179.0 65.9 100.1 46.6 78 -1.4 85 -0.9 0 0.0 0 0.0 10 40
83 B 95 HIS H H H < > TS+ 0 0 -70.2 -24.3 179.7 62.1 94.6 40.2 79 -1.1 86 -0.9 0 0.0 0 0.0 7 29
84 B 96 ALA A T h < 3 TS+ 0 0 -73.9 -16.8 -178.4 46.3 105.7 47.5 80 -0.9 0 0.0 0 0.0 0 0.0 6 23
85 B 97 HIS H T t < T 0 0 -119.4 34.7 179.5 999.9 999.9 94.5 82 -0.9 0 0.0 0 0.0 0 0.0 7 31
86 B 98 VAL V t < T 0 0 -97.5 999.9 999.9 999.9 999.9 43.0 83 -0.9 0 0.0 0 0.0 0 0.0 8 25
1cxzB.pdb
1CXZ SIGNALING PROTEIN MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand HHHHTT TTS TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHHHHHHHHHHHHTT Kabs/Sand
chirality -++++-++++--++-+++++++++++++++++++++++++++++++++++++-+--+++++++++++++++++++++++++++ chirality
bends SSSSSS SSS SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSSSSS bends
turns TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTT turns
5-turns >5555< >5555< 5-turns
3-turns >33<>33<>33< >>3<< 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns >>44<< >>>>XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX<<<< >>>>XXXXXXXXXXXXXXXXXXX<<<< 4-turns
summary hHHHHhTtTTttTThHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHht hHHHHHHHHHHHHHHHHHHHHHHHHHhtt summary
sequence WSLLEQLGLAGADLAAPGVQQQLELERERLRREIRKELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQELHAHV sequence
10 20 30 40 50 60 70 80