Secondary structure calculation program - copyright by David Keith Smith, 1989
 1cojA.pdb                                                   
 1COJ  OXIDOREDUCTASE  MOL_ID: 1;  MOL_ID: 1;  
 Sequence length -  211
             A       A K K                                                                        hydrogen bonding             Ooi's
 strk chain/ l amino u & S structure   bridge        dihedral angles                     donor    acceptor   donor    acceptor  N  N
 num  seq.no t acids t S + patterns   partners    phi    psi  omega  alpha kappa   tco to/energy fr/energy to/energy fr/energy  8 14
    1 A   2    VAL V                    0    0  999.9  163.9  178.5  999.9 999.9 999.9    0  0.0    3 -1.1    0  0.0    0  0.0  5 21
    2 A   3    HIS H               -    0    0  -88.0   97.1  179.7 -175.3 999.9 140.8    0  0.0    0  0.0    0  0.0    0  0.0  5 22
    3 A   4    LYS K               -    0    0  -94.2  160.2  179.8 -146.9  12.0 124.0    1 -1.1    0  0.0    0  0.0    0  0.0  7 26
    4 A   5    LEU L               -    0    0 -120.6  161.4  177.1 -156.3   3.3 143.0    0  0.0    0  0.0    0  0.0    0  0.0  7 29
    5 A   6    GLU E               -    0    0 -137.0  144.2 -179.7  -98.3  32.3 170.3    0  0.0    0  0.0    0  0.0    0  0.0  5 33
    6 A   7    PRO P               -    0    0  -61.5  152.0  179.0 -128.3  26.7 103.1    0  0.0    8 -0.9    0  0.0    0  0.0  7 37
    7 A   8    LYS K     g     > T +    0    0 -104.4   85.1 -179.1  179.6  27.3 140.0    0  0.0   10 -2.1    0  0.0    0  0.0  7 32
    8 A   9    ASP D   G G     > TS+    0    0  -55.3  -31.3 -179.5   70.6  74.4  36.6    6 -0.9   11 -2.0    0  0.0    0  0.0  5 32
    9 A  10    HIS H   G G     3 TS+    0    0  -64.8   -9.0 -179.7   65.4  89.3  54.4    0  0.0    0  0.0    0  0.0    0  0.0  4 23
   10 A  11    LEU L   G G     < TS+    0    0  -88.9  -10.7 -178.4  119.5  70.6  57.9    7 -2.1    0  0.0    0  0.0    0  0.0  8 34
   11 A  12    LYS K     g     < T -    0    0  -64.1  117.2 -180.0 -141.1  57.7 116.0    8 -2.0    0  0.0    0  0.0    0  0.0 10 42
   12 A  13    PRO P               -    0    0  -75.7  155.3  179.5 -171.1  19.9 112.6    0  0.0    0  0.0    0  0.0    0  0.0 11 44
   13 A  14    GLN Q               +    0    0 -152.1  143.4  179.0   11.4  57.6 174.4    0  0.0    0  0.0    0  0.0    0  0.0  9 35
   14 A  15    ASN N   S S        S+    0    0   60.4   38.5  178.9  177.6  77.3  34.1    0  0.0    0  0.0    0  0.0    0  0.0  8 30
   15 A  16    LEU L               -    0    0  -68.9  155.7 -179.8 -106.9  36.9 107.9   18 -0.6   17 -0.9    0  0.0    0  0.0 13 40
   16 A  17    GLU E   S S        S-    0    0  -88.1  104.1  179.6   -1.9 102.7 138.2    0  0.0    0  0.0    0  0.0    0  0.0 10 33
   17 A  18    GLY G   S S        S+    0    0  100.2  -10.0  178.8   83.8 119.0  70.8   15 -0.9    0  0.0    0  0.0    0  0.0  8 36
   18 A  19    ILE I   S S        S-    0    0 -129.5  105.7 -177.4 -143.4  74.0 159.8    0  0.0   15 -0.6    0  0.0    0  0.0 13 49
   19 A  20    SER S     h >     T -    0    0  -67.7  163.9  178.3 -120.1  20.4  97.8    0  0.0   23 -2.0    0  0.0    0  0.0 11 37
   20 A  21    ASN N   H H >     TS+    0    0  -70.7  -29.9  179.1   61.9 116.0  35.6    0  0.0   24 -2.7    0  0.0    0  0.0  9 35
   21 A  22    GLU E   H H 4     TS+    0    0  -63.2  -35.8  179.2   43.5 107.4  32.2    0  0.0    0  0.0    0  0.0    0  0.0  7 27
   22 A  23    GLN Q   H H >     TS+    0    0  -75.3  -42.7 -179.6   50.0 114.1  26.9    0  0.0   26 -1.1    0  0.0    0  0.0 13 40
   23 A  24    ILE I   H H X     TS+    0    0  -64.0  -40.2 -177.6   68.8  99.0  28.3   19 -2.0   27 -2.8    0  0.0    0  0.0 13 48
   24 A  25    GLU E   H H X     TS+    0    0  -48.8  -63.5 -179.8   33.6 105.7  23.7   20 -2.7   28 -2.8    0  0.0    0  0.0  9 31
   25 A  26    PRO P   H H >    >TS+    0    0  -65.8  -32.0 -179.3   57.3 117.2  29.6    0  0.0   30 -2.1    0  0.0   29 -1.7  9 30
   26 A  27    HIS H   H H <    >TS+    0    0  -62.9  -45.4 -179.3   28.1 119.8  21.1   22 -1.1   31 -2.5    0  0.0    0  0.0 11 46
   27 A  28    PHE F   H H <    >TS+    0    0  -81.2  -52.4 -177.8   39.6 128.1  19.5   23 -2.8   32 -1.4    0  0.0    0  0.0 10 48
   28 A  29    GLU E   H H <    5TS+    0    0  -71.3  -34.5 -179.0   21.7 130.3  36.5   24 -2.8    0  0.0    0  0.0    0  0.0  9 33
   29 A  30    ALA A   T h X    5TS+    0    0 -100.1  -58.0 -178.7   31.7 129.7  27.7   25 -1.7   33 -1.1    0  0.0    0  0.0  9 33
   30 A  31    HIS H   H H >       >   3 TS+    0    0  -68.7  -33.2  179.0   54.4 110.8  31.9   40 -2.3   51 -0.6    0  0.0   47 -0.6 10 30
   45 A  46    LEU L   H H <   3 TS+    0    0  -69.6  -30.4  179.6   57.4 103.7  35.6   41 -2.6    0  0.0    0  0.0    0  0.0 11 35
   46 A  47    ALA A   H H <   3 TS+    0    0  -73.1  -21.1  179.6   86.6  87.0  46.3   42 -1.5   48 -1.2    0  0.0    0  0.0  8 25
   47 A  48    ASP D     h X   < T -    0    0  -85.6   99.5 -179.1 -165.8  63.7 135.2   43 -0.6   51 -2.7   44 -0.6    0  0.0  9 25
   48 A  49    GLN Q   T T 4     TS+    0    0  -58.5  -19.2  179.5   53.6  86.5  49.8   46 -1.2    0  0.0    0  0.0    0  0.0  8 22
   49 A  50    ASN N   T T 4   > TS+    0    0  -84.1  -41.1  179.1   38.9 113.8  29.4    0  0.0   52 -0.5    0  0.0    0  0.0  5 20
   50 A  51    PHE F   T T 4   3 TS+    0    0  -70.9  -58.6  178.7   38.1 125.0  13.7    0  0.0   52 -1.5    0  0.0    0  0.0  9 25
   51 A  52    ALA A   T T <   3 TS-    0    0  -91.9   70.4 -179.4 -170.3  88.6 126.5   47 -2.7   53 -0.7   44 -0.6    0  0.0 12 30
   52 A  53    ASP D     g     X T -    0    0  -68.3  112.6 -179.7 -161.1  13.1 123.1   50 -1.5   55 -1.2   49 -0.5    0  0.0 11 25
   53 A  54    ARG R   G G     > TS+    0    0  -64.9  -30.4 -179.9   62.2  87.6  36.3   51 -0.7   56 -1.5    0  0.0    0  0.0  7 22
   54 A  55    SER S   G G     3 TS+    0    0  -70.2  -17.6  179.5   53.3 101.8  46.0    0  0.0    0  0.0    0  0.0    0  0.0  4 17
   55 A  56    LYS K   G G     < TS+    0    0  -97.6    6.1  179.7  143.4  76.4  73.2   52 -1.2    0  0.0    0  0.0    0  0.0  7 21
   56 A  57    ALA A     g     < T +    0    0  -50.4  124.7 -178.2  163.6  21.4 105.4   53 -1.5    0  0.0    0  0.0    0  0.0 11 22
   57 A  58    ASN N               -    0    0 -150.2  138.5 -178.2 -138.9  41.8 170.8    0  0.0    0  0.0    0  0.0    0  0.0  7 18
   58 A  59    GLN Q   S S        S+    0    0  -74.6  -16.1  179.2   55.9 102.2  52.9    0  0.0    0  0.0    0  0.0    0  0.0  6 17
   59 A  60    ASN N   S S        S-    0    0  -81.5  -38.3  177.9  -32.2 131.6  33.4    0  0.0    0  0.0    0  0.0    0  0.0  4 13
   60 A  61    TYR Y   S S        S+    0    0  178.7  135.3  176.7  145.7  70.2 138.3    0  0.0    0  0.0    0  0.0    0  0.0  8 19
   61 A  62    SER S     h >     T -    0    0 -171.0  143.9 -179.9 -117.0  51.4 151.7    0  0.0   65 -2.2    0  0.0    0  0.0 10 24
   62 A  63    GLU E   H H >     TS+    0    0  -54.0  -42.6  179.7   53.8 117.1  22.8    0  0.0   66 -2.1    0  0.0    0  0.0 10 30
   63 A  64    TYR Y   H H >     TS+    0    0  -57.6  -48.1 -179.7   48.5 108.6  23.3    0  0.0   67 -2.0    0  0.0    0  0.0 13 31
   64 A  65    ARG R   H H >     TS+    0    0  -58.1  -53.9 -177.5   48.5 110.6  18.3    0  0.0   68 -2.3    0  0.0    0  0.0 11 30
   65 A  66    GLU E   H H X     TS+    0    0  -57.8  -39.7  178.8   51.2 111.3  29.4   61 -2.2   69 -2.3    0  0.0    0  0.0  9 32
   66 A  67    LEU L   H H X     TS+    0    0  -64.8  -41.8  179.8   47.4 111.3  25.8   62 -2.1   70 -1.4    0  0.0    0  0.0 12 39
   67 A  68    LYS K   H H X     TS+    0    0  -68.7  -34.7  179.2   54.0 110.0  31.8   63 -2.0   71 -1.2    0  0.0    0  0.0  8 37
   68 A  69    VAL V   H H X   > TS+    0    0  -63.4  -53.8 -179.0   39.2 114.2  12.0   64 -2.3   72 -1.1    0  0.0   71 -0.7  8 34
   69 A  70    GLU E   H H X   3 TS+    0    0  -72.2  -17.3  178.0   71.2 103.4  44.7   65 -2.3   73 -2.7    0  0.0    0  0.0  9 35
   70 A  71    GLU E   H H X   3 TS+    0    0  -63.0  -40.6 -180.0   45.8 101.0  23.0   66 -1.4   74 -2.6    0  0.0    0  0.0 10 40
   71 A  72    THR T   H H X   < TS+    0    0  -69.0  -36.9  179.8   52.5 111.7  28.1   67 -1.2   75 -2.0   68 -0.7    0  0.0 10 37
   72 A  73    PHE F   H H X     TS+    0    0  -62.7  -51.1 -178.6   36.4 117.2  17.0   68 -1.1   76 -1.6    0  0.0    0  0.0 11 40
   73 A  74    ASN N   H H X     TS+    0    0  -72.8  -40.2  179.8   51.1 116.2  26.1   69 -2.7   77 -2.3    0  0.0    0  0.0 13 43
   74 A  75    TYR Y   H H X     TS+    0    0  -65.0  -42.7  178.6   45.3 113.7  23.4   70 -2.6   78 -2.7    0  0.0    0  0.0 11 42
   75 A  76    MET M   H H X     TS+    0    0  -67.0  -34.5  177.8   58.1 108.8  29.7   71 -2.0   79 -2.8    0  0.0    0  0.0 10 53
   76 A  77    GLY G   H H X     TS+    0    0  -59.4  -43.2  178.6   42.5 111.2  22.2   72 -1.6   80 -1.4    0  0.0    0  0.0 11 57
   77 A  78    VAL V   H H X     TS+    0    0  -65.1  -60.1 -177.9   43.1 118.1   9.1   73 -2.3   81 -2.3    0  0.0    0  0.0 12 52
   78 A  79    VAL V   H H X     TS+    0    0  -54.0  -51.4 -179.3   48.8 114.2  26.2   74 -2.7   82 -2.1    0  0.0    0  0.0  8 51
   79 A  80    LEU L   H H X     TS+    0    0  -60.8  -39.6  178.8   49.6 112.1  27.8   75 -2.8   83 -1.8    0  0.0    0  0.0 10 59
   80 A  81    HIS H   H H X     TS+    0    0  -67.7  -38.2  179.1   51.5 109.2  25.7   76 -1.4   84 -2.9    0  0.0    0  0.0 10 61
   81 A  82    GLU E   H H X     TS+    0    0  -65.8  -36.1  178.7   47.1 111.7  28.3   77 -2.3   85 -1.8    0  0.0    0  0.0 10 51
   82 A  83    LEU L   H H X     TS+    0    0  -71.6  -33.1  179.8   48.8 114.9  33.0   78 -2.1   86 -0.5    0  0.0    0  0.0 10 52
   83 A  84    TYR Y   H H <   > TS+    0    0  -70.5  -59.5  180.0   36.9 116.8  12.2   79 -1.8   86 -1.0    0  0.0    0  0.0 12 65
   84 A  85    PHE F   H H <   > TS+    0    0  -61.9  -41.1 -179.2   62.5 111.5  25.1   80 -2.9   87 -1.9    0  0.0    0  0.0 10 65
   85 A  86    GLY G   H H <   3 TS+    0    0  -60.7  -18.4 -179.6   50.6 101.8  48.6   81 -1.8    0  0.0    0  0.0    0  0.0 10 46
   86 A  87    MET M   T h <   < TS+    0    0 -106.4   15.4  179.7   95.4  90.5  76.7   83 -1.0  188 -2.7   82 -0.5    0  0.0 11 53
   87 A  88    LEU L   B B   A < T +  187    0 -112.1  127.7  178.3  164.7  41.4 156.7   84 -1.9    0  0.0    0  0.0    0  0.0 13 54
   88 A  89    THR T     t     > T -    0    0 -136.8  141.7 -179.8  -86.7  50.4 173.0  186 -2.6   91 -2.5    0  0.0    0  0.0 12 38
   89 A  90    PRO P   T T     3 TS-    0    0  -52.8  116.3  179.9   -4.9 113.1 104.9    0  0.0    0  0.0    0  0.0    0  0.0 10 33
   90 A  91    GLY G   T T     3 TS-    0    0   79.8   -3.5  179.8  -92.4 118.1  66.9    0  0.0    0  0.0    0  0.0    0  0.0  9 28
   91 A  92    GLY G     t     < T -    0    0   86.9  172.8 -179.6 -122.6  40.2  97.7   88 -2.5    0  0.0    0  0.0    0  0.0 11 34
   92 A  93    LYS K   B B   b     -  188    0 -160.0  140.5  179.1  -14.1  54.6 164.6  187 -2.1  189 -2.8    0  0.0    0  0.0 10 29
   93 A  94    GLY G   S S        S-    0    0   66.9 -160.5 -179.9  -95.8  72.6 100.4    0  0.0    0  0.0    0  0.0    0  0.0  7 25
   94 A  95    GLU E               -    0    0 -152.3  157.7  179.4  -78.6  42.3 164.7    0  0.0    0  0.0    0  0.0    0  0.0  6 32
   95 A  96    PRO P               -    0    0  -64.0  136.6 -179.4 -111.0  57.2 115.0    0  0.0    0  0.0    0  0.0    0  0.0 10 36
   96 A  97    SER S     h >     T -    0    0  -63.6  161.2  179.5 -113.1  19.8 100.3    0  0.0  100 -2.7    0  0.0    0  0.0  7 30
   97 A  98    GLU E   H H >     TS+    0    0  -62.6  -39.9  179.2   53.5 119.6  24.7    0  0.0  101 -2.4    0  0.0    0  0.0  6 23
   98 A  99    ALA A   H H >     TS+    0    0  -60.7  -43.7  179.5   46.7 110.4  24.1    0  0.0  102 -1.9    0  0.0    0  0.0  6 31
   99 A 100    LEU L   H H >     TS+    0    0  -64.8  -45.3  179.9   50.8 111.6  20.7    0  0.0  103 -2.4    0  0.0    0  0.0 10 45
  100 A 101    LYS K   H H X     TS+    0    0  -60.2  -39.6 -179.3   50.5 109.9  27.7   96 -2.7  104 -2.0    0  0.0    0  0.0 11 38
  101 A 102    LYS K   H H X     TS+    0    0  -66.7  -42.4  179.7   47.6 110.7  25.7   97 -2.4  105 -2.3    0  0.0    0  0.0  8 27
  102 A 103    LYS K   H H X     TS+    0    0  -64.7  -43.9  179.1   49.6 112.4  23.8   98 -1.9  106 -2.8    0  0.0    0  0.0 10 39
  103 A 104    ILE I   H H X    >TS+    0    0  -61.1  -38.8 -179.4   54.5 109.5  27.4   99 -2.4  107 -2.5    0  0.0  108 -1.8 13 41
  104 A 105    GLU E   H H <    5TS+    0    0  -62.5  -48.1 -179.3   36.9 114.7  19.6  100 -2.0    0  0.0    0  0.0    0  0.0 10 28
  105 A 106    GLU E   H H <    5TS+    0    0  -76.9  -31.2 -180.0   36.1 126.8  33.2  101 -2.3    0  0.0    0  0.0    0  0.0  8 22
  106 A 107    ASP D   H H <    5TS+    0    0  -87.8  -42.7 -178.0   17.4 135.3  28.8  102 -2.8    0  0.0    0  0.0    0  0.0  9 31
  107 A 108    ILE I   T h <    5TS-    0    0 -101.4  -34.2 -179.6 -108.3 103.8  41.7  103 -2.5    0  0.0    0  0.0    0  0.0 11 34
  108 A 109    GLY G   S t           T -    0    0  145.4  165.4  179.9  -76.8  69.1 135.8    0  0.0  113 -2.7    0  0.0    0  0.0 10 27
  110 A 111    LEU L   H H >     TS+    0    0  -59.0  -40.3  179.6   52.6 127.9  27.2    0  0.0  114 -2.6    0  0.0    0  0.0  9 32
  111 A 112    ASP D   H H >     TS+    0    0  -62.0  -45.1  179.9   44.6 111.5  21.8    0  0.0  115 -1.9    0  0.0    0  0.0  7 23
  112 A 113    ALA A   H H >     TS+    0    0  -66.5  -40.6 -179.5   51.5 113.8  25.6    0  0.0  116 -2.3    0  0.0    0  0.0  9 25
  113 A 114    CYS C   H H X     TS+    0    0  -64.5  -44.8  179.4   48.5 108.9  24.7  109 -2.7  117 -2.7    0  0.0    0  0.0 11 41
  114 A 115    THR T   H H X     TS+    0    0  -62.2  -41.8  179.8   48.2 113.4  22.5  110 -2.6  118 -2.5    0  0.0    0  0.0  8 43
  115 A 116    ASN N   H H X     TS+    0    0  -64.9  -39.0 -180.0   50.5 111.8  27.1  111 -1.9  119 -2.1    0  0.0    0  0.0  8 32
  116 A 117    GLU E   H H X     TS+    0    0  -66.3  -43.2  179.7   47.5 111.4  24.8  112 -2.3  120 -2.3    0  0.0    0  0.0  9 37
  117 A 118    LEU L   H H X     TS+    0    0  -65.6  -43.7  179.7   48.7 112.0  24.3  113 -2.7  121 -2.4    0  0.0    0  0.0 12 50
  118 A 119    LYS K   H H X     TS+    0    0  -63.3  -39.4  179.6   51.3 111.7  25.1  114 -2.5  122 -1.7    0  0.0    0  0.0  9 42
  119 A 120    ALA A   H H X     TS+    0    0  -62.9  -47.4  179.4   46.3 111.0  21.3  115 -2.1  123 -2.0    0  0.0    0  0.0  8 39
  120 A 121    ALA A   H H X     TS+    0    0  -63.1  -38.6  179.4   53.9 110.7  27.6  116 -2.3  124 -1.8    0  0.0    0  0.0 12 42
  121 A 122    ALA A   H H <     TS+    0    0  -65.3  -32.3  179.0   43.1 113.1  34.6  117 -2.4    0  0.0    0  0.0    0  0.0 13 47
  122 A 123    MET M   H H <     TS+    0    0  -82.5  -28.3 -178.3   48.6 115.9  39.6  118 -1.7    0  0.0    0  0.0    0  0.0  9 38
  123 A 124    ALA A   H H <     TS+    0    0  -86.2  -20.4 -178.7   74.5 101.1  47.6  119 -2.0    0  0.0    0  0.0    0  0.0  7 31
  124 A 125    PHE F     h <     T -    0    0 -107.9  144.4 -176.2 -151.4  61.3 142.0  120 -1.8    0  0.0    0  0.0    0  0.0 12 35
  125 A 126    ARG R   S S        S+    0    0  -83.4   -7.6 -179.2   19.1  91.4  59.6    0  0.0    0  0.0    0  0.0    0  0.0  9 38
  126 A 127    GLY G   S e        S-    0    0 -126.7  -58.9 -178.6  -15.0 117.9  45.7  144 -2.2  163 -2.6    0  0.0  164 -0.8 12 47
  127 A 128    TRP W   E E  AAB    -  144  162 -151.1  161.9  176.3 -145.2  38.7 168.2  144 -2.1  144 -2.8    0  0.0    0  0.0 16 57
  128 A 129    ALA A   E E  AAB    -  143  161 -131.6  121.5 -177.8 -171.2  27.8 176.3  161 -1.9  161 -2.8    0  0.0    0  0.0 16 58
  129 A 130    ILE I   E E  AAB    -  142  160 -124.4  136.2  175.0 -162.0  21.1 163.3  142 -2.5  142 -3.2    0  0.0  131 -0.6 14 66
  130 A 131    LEU L   E E  AAB    +  141  159 -108.2  120.6 -179.8  142.0  40.4 168.2  159 -2.6  158 -2.9    0  0.0  159 -2.1 13 67
  131 A 132    GLY G   E E  AAB    -  140  157 -150.9  177.8  179.0  -90.2  53.5 155.5  140 -2.4  140 -2.6  129 -0.6  133 -0.6 13 56
  132 A 133    LEU L   E E  AAB    -  139  156  -99.4  121.5  178.8 -142.8  30.9 150.6  156 -2.5  156 -2.4    0  0.0  134 -0.8 13 52
  133 A 134    ASP D     e >   > T -    0    0  -82.3  110.5 -178.3 -157.4   8.2 138.6  138 -2.7  137 -2.8  131 -0.6  136 -1.0 12 43
  134 A 135    ILE I   T T 4   3 TS+    0    0  -64.8  -17.8 -179.3   60.8  87.4  46.3  132 -0.8    0  0.0    0  0.0    0  0.0 12 38
  135 A 136    PHE F   T T 4   3 TS+    0    0  -82.0  -24.2  179.9   17.6 122.6  38.8    0  0.0    0  0.0    0  0.0    0  0.0  9 27
  136 A 137    SER S   T T 4   < TS-    0    0 -120.3  -15.4 -179.1 -127.2  94.4  57.6  133 -1.0    0  0.0    0  0.0    0  0.0  5 32
  137 A 138    GLY G     t <     T +    0    0   73.3   19.1 -179.4  125.9  68.9  47.3  133 -2.8    0  0.0    0  0.0    0  0.0  9 41
  138 A 139    ARG R     e         -    0    0 -112.8  149.7  177.5 -113.6  66.9 143.3    0  0.0  133 -2.7    0  0.0    0  0.0  8 45
  139 A 140    LEU L   E E  AA     -  132    0  -77.0  136.8 -180.0 -179.9  43.5 128.8    0  0.0    0  0.0    0  0.0    0  0.0 12 52
  140 A 141    VAL V   E E  AA     -  131    0 -139.6  153.7  178.3 -125.0  30.9 165.3  131 -2.6  131 -2.4    0  0.0  142 -0.6 10 52
  141 A 142    VAL V   E E  AA     -  130    0 -100.8  122.0 -178.8 -169.4  28.6 155.3    0  0.0  143 -0.5    0  0.0    0  0.0 11 52
  142 A 143    ASN N   E E  AA     -  129    0 -116.8  116.1  178.7 -160.9   3.6 164.4  129 -3.2  129 -2.5  140 -0.6    0  0.0 12 51
  143 A 144    GLY G   E E  AA     -  128    0  -97.5  140.9 -179.9 -162.3   6.2 144.1  141 -0.5    0  0.0    0  0.0    0  0.0 14 46
  144 A 145    LEU L   E E  AA     -  127    0 -122.4  144.3  178.0 -156.5  20.5 159.8  127 -2.8  126 -2.2    0  0.0  127 -2.1 15 44
  145 A 146    ASP D   S S        S-    0    0  -92.1   -8.5  179.3   -3.4  85.7  56.5  149 -1.8    0  0.0    0  0.0    0  0.0 11 33
  146 A 147    ALA A   B B   C > TS-  149    0 -165.5  174.6 -179.6  -80.0  92.4 159.0  149 -0.8  149 -1.2    0  0.0    0  0.0 10 43
  147 A 148    HIS H   T T     3 TS+    0    0  -56.0  -34.2 -177.2   25.1 131.2  31.8    0  0.0    0  0.0    0  0.0    0  0.0 14 51
  148 A 149    ASN N   T T     3 TS+    0    0 -122.7   29.5 -179.9   97.0 100.8  91.3    0  0.0    0  0.0    0  0.0    0  0.0 10 41
  149 A 150    VAL V   B B   C < TS-  146    0 -129.3  115.8  179.7   -3.2  94.7 161.7  146 -1.2  145 -1.8    0  0.0  146 -0.8  7 32
  150 A 151    TYR Y   S S        S+    0    0   87.8    8.4  179.5  154.3  83.0  64.5    0  0.0    0  0.0    0  0.0    0  0.0  9 33
  151 A 152    ASN N               -    0    0  -65.6  137.0  176.7 -126.4  44.0 114.5    0  0.0    0  0.0    0  0.0    0  0.0  9 42
  152 A 153    LEU L     t     > T -    0    0  -87.4  129.6  178.2 -118.0  24.9 137.5    0  0.0  155 -1.1    0  0.0    0  0.0  6 36
  153 A 154    THR T   T T     3 TS+    0    0  -62.8  142.1  178.1   15.2  95.3 112.9    0  0.0    0  0.0    0  0.0    0  0.0  4 31
  154 A 155    GLY G   T T     3 TS+    0    0   79.8  -14.5 -178.6  147.6  85.0  77.7    0  0.0    0  0.0    0  0.0    0  0.0  7 34
  155 A 156    LEU L     t     < T -    0    0  -60.5  129.1  177.6 -146.8  40.5 107.5  152 -1.1    0  0.0    0  0.0    0  0.0  9 45
  156 A 157    ILE I   E E  AB     -  132    0  -98.8  109.4 -179.2 -134.1  23.1 152.9  132 -2.4  132 -2.5    0  0.0    0  0.0  9 48
  157 A 158    PRO P   E E  AB     +  131    0  -68.2  133.0  178.7  163.5  36.0 116.0    0  0.0    0  0.0    0  0.0    0  0.0 10 58
  158 A 159    LEU L   E E  A*    S+    0    0 -112.2  -53.0  178.9   22.3  73.5  41.5  130 -2.9    0  0.0    0  0.0    0  0.0 11 64
  159 A 160    ILE I   E E  AB     -  130    0 -122.1  128.1 -178.8 -172.6  68.8 169.9  130 -2.1  130 -2.6    0  0.0    0  0.0 10 67
  160 A 161    VAL V   E E  AB     -  129    0 -125.8  121.1  179.7 -169.9   3.0 167.5    0  0.0  162 -0.5    0  0.0    0  0.0 12 69
  161 A 162    ILE I   E E  AB     -  128    0 -114.1  122.4  178.9 -142.3  16.1 161.0  128 -2.8  128 -1.9    0  0.0  163 -0.5 10 67
  162 A 163    ASP D   E E  AB     +  127    0  -81.4  122.5  178.9  174.6  21.7 135.4  160 -0.5    0  0.0    0  0.0    0  0.0 10 69
  163 A 164    THR T     e         +    0    0 -111.6    8.3  177.2  125.1  35.5  74.5  126 -2.6    0  0.0  161 -0.5    0  0.0 14 58
  164 A 165    TYR Y   S g     > TS-    0    0  -63.0  146.8 -178.8 -116.2  73.6 115.6  126 -0.8  167 -1.9    0  0.0    0  0.0  9 52
  165 A 166    GLU E   G G >   > TS+    0    0  -57.8  -32.5  179.9   63.5 112.4  35.8    0  0.0  169 -2.4    0  0.0  168 -1.1  7 41
  166 A 167    HIS H   G G 4   3 TS+    0    0  -66.4  -17.9 -179.0   68.0  91.9  43.7    0  0.0    0  0.0    0  0.0    0  0.0  7 43
  167 A 168    ALA A   G G 4   < TS+    0    0  -73.0  -25.9 -177.8    6.3 122.5  38.6  164 -1.9    0  0.0    0  0.0    0  0.0 11 58
  168 A 169    TYR Y   T h >   <>TS+    0    0 -136.1   -6.4 -177.7   98.4  97.9  61.8  165 -1.1  172 -3.1    0  0.0  173 -0.6 14 45
  169 A 170    TYR Y   H H X    5TS+    0    0  -59.6  -31.7  179.8   56.7  81.8  37.6  165 -2.4  173 -0.9    0  0.0    0  0.0 11 33
  170 A 171    VAL V   H H 4    5TS+    0    0  -66.1  -44.0 -178.7   26.8 121.4  20.2    0  0.0    0  0.0    0  0.0    0  0.0  9 29
  171 A 172    ASP D   H H 4    5TS+    0    0  -86.2  -42.8 -175.8   15.0 140.8  28.3    0  0.0    0  0.0    0  0.0    0  0.0  8 33
  172 A 173    TYR Y   H H <   >5TS-    0    0 -117.0    0.1 -178.2 -158.3  78.0  64.4  168 -3.1  175 -2.4    0  0.0    0  0.0 10 29
  173 A 174    LYS K   T h <   3   < T +    0    0  -77.0   92.9 -179.8  165.1  37.1 123.4  172 -2.4  179 -0.6    0  0.0    0  0.0  8 29
  176 A 177    ARG R   H H >   > T +    0    0  -75.1  -40.1 -179.8   67.5  62.9  29.3  174 -1.4  180 -2.1    0  0.0  179 -0.6 11 38
  177 A 178    PRO P   H H >   3 TS+    0    0  -50.3  -49.7  179.9   48.1  99.8  26.9    0  0.0  181 -2.1    0  0.0    0  0.0  7 38
  178 A 179    PRO P   H H >   3 TS+    0    0  -63.4  -27.9  178.9   54.3 110.5  32.8    0  0.0  182 -2.0    0  0.0    0  0.0  8 33
  179 A 180    TYR Y   H H X   < TS+    0    0  -69.4  -42.0  179.7   51.0 106.1  24.7  176 -0.6  183 -2.4  175 -0.6    0  0.0 12 45
  180 A 181    ILE I   H H X     TS+    0    0  -62.3  -41.2  178.7   49.7 110.3  24.2  176 -2.1  184 -1.9    0  0.0    0  0.0 10 52
  181 A 182    ASP D   H H X     TS+    0    0  -62.8  -43.5  179.8   50.8 110.1  22.3  177 -2.1  185 -1.3    0  0.0    0  0.0  8 42
  182 A 183    ALA A   H H X     TS+    0    0  -61.7  -39.4  179.1   56.1 106.0  26.5  178 -2.0  186 -0.8    0  0.0    0  0.0 11 48
  183 A 184    PHE F   H H <   > TS+    0    0  -58.4  -47.5  179.5   50.6 105.9  21.3  179 -2.4  186 -1.2    0  0.0    0  0.0 12 61
  184 A 185    PHE F   H H <   > TS+    0    0  -61.9  -28.1  179.7   60.1 103.6  37.4  180 -1.9  187 -0.9    0  0.0    0  0.0  7 54
  185 A 186    LYS K   H H <   3 TS+    0    0  -73.4  -19.3 -178.1   44.7 108.0  46.1  181 -1.3    0  0.0    0  0.0    0  0.0 10 40
  186 A 187    ASN N   T h <   < TS+    0    0 -112.5   19.5 -179.2  137.1  77.4  78.1  183 -1.2   88 -2.6  182 -0.8    0  0.0 14 43
  187 A 188    ILE I   B B   A < T -   87    0  -72.7  127.2  178.0 -144.0  47.5 117.7  184 -0.9   92 -2.1    0  0.0  189 -1.1 12 50
  188 A 189    ASN N   B h > b > T -   92    0  -90.1   95.5 -179.3 -173.3  16.3 141.9   86 -2.7  192 -1.6    0  0.0  191 -0.6 12 42
  189 A 190    TRP W   H H >   3 TS+    0    0  -65.2  -19.2  178.1   67.6  78.4  46.9   92 -2.8  193 -2.8  187 -1.1    0  0.0 12 39
  190 A 191    ASP D   H H >   3 TS+    0    0  -65.1  -42.0  179.4   44.1 105.3  21.4    0  0.0  194 -1.7    0  0.0    0  0.0 10 35
  191 A 192    VAL V   H H >   < TS+    0    0  -65.7  -50.4  179.9   46.3 115.5  18.5  188 -0.6  195 -2.2    0  0.0    0  0.0  9 39
  192 A 193    VAL V   H H X     TS+    0    0  -60.9  -43.7  180.0   52.5 111.0  25.1  188 -1.6  196 -2.4    0  0.0    0  0.0 12 48
  193 A 194    ASN N   H H X     TS+    0    0  -61.3  -38.8  179.1   48.9 110.0  28.4  189 -2.8  197 -2.1    0  0.0    0  0.0 11 40
  194 A 195    GLU E   H H X     TS+    0    0  -67.0  -42.7  178.8   52.3 109.0  24.6  190 -1.7  198 -2.3    0  0.0    0  0.0  8 33
  195 A 196    ARG R   H H X     TS+    0    0  -58.3  -42.8 -179.9   50.3 110.0  23.1  191 -2.2  199 -2.7    0  0.0    0  0.0 10 45
  196 A 197    PHE F   H H X     TS+    0    0  -62.6  -45.1  179.7   51.9 107.6  25.5  192 -2.4  200 -2.8    0  0.0    0  0.0 10 44
  197 A 198    GLU E   H H X     TS+    0    0  -57.4  -47.5 -179.9   43.6 114.1  20.7  193 -2.1  201 -2.2    0  0.0    0  0.0  8 35
  198 A 199    LYS K   H H X     TS+    0    0  -65.4  -41.9  179.8   53.6 112.1  26.0  194 -2.3  202 -2.7    0  0.0    0  0.0  8 30
  199 A 200    ALA A   H H X     TS+    0    0  -59.9  -45.3  179.7   45.8 111.0  23.0  195 -2.7  203 -2.3    0  0.0    0  0.0 10 38
  200 A 201    MET M   H H X     TS+    0    0  -66.7  -40.1  178.1   50.5 111.9  28.3  196 -2.8  204 -1.6    0  0.0    0  0.0  8 41
  201 A 202    LYS K   H H X     TS+    0    0  -63.8  -40.9  178.4   48.9 112.1  21.7  197 -2.2  205 -0.9    0  0.0    0  0.0  8 26
  202 A 203    ALA A   H H X   > TS+    0    0  -64.1  -41.4  179.9   55.6 106.9  26.6  198 -2.7  206 -1.3    0  0.0  205 -0.7  8 29
  203 A 204    TYR Y   H H X   3 TS+    0    0  -61.5  -32.8 -179.8   62.2  98.3  33.3  199 -2.3  207 -1.5    0  0.0    0  0.0 10 30
  204 A 205    GLU E   H H <   3 TS+    0    0  -62.3  -34.2  179.3   42.2 108.5  29.8  200 -1.6    0  0.0    0  0.0    0  0.0  7 22
  205 A 206    ALA A   H H <   < TS+    0    0  -82.0  -22.8 -178.6   47.5 118.7  43.0  201 -0.9    0  0.0  202 -0.7    0  0.0  6 22
  206 A 207    LEU L   H H <   > TS+    0    0  -96.2   -9.7 -178.7  124.1  78.6  60.7  202 -1.3  209 -0.9    0  0.0    0  0.0  8 24
  207 A 208    LYS K   T h <   3 TS+    0    0  -58.2  142.2 -178.7   18.8  78.6 105.4  203 -1.5    0  0.0    0  0.0    0  0.0  9 22
  208 A 209    ASP D   T T     3 TS+    0    0   65.5   36.5  179.9  153.3  77.0  32.3    0  0.0    0  0.0    0  0.0    0  0.0  6 17
  209 A 210    PHE F   S t     < TS+    0    0  -60.6  -44.7  177.3   44.3  70.1  25.3  206 -0.9  211 -0.6    0  0.0    0  0.0  6 18
  210 A 211    ILE I                    0    0 -101.9  124.0 -179.2  999.9 999.9 157.1    0  0.0    0  0.0    0  0.0    0  0.0  4 15
  211 A 212    LYS K                    0    0 -113.1  999.9  999.9  999.9 999.9 161.8  209 -0.6    0  0.0    0  0.0    0  0.0  3  9
 
 1cojA.pdb                                                   
 1COJ  OXIDOREDUCTASE  MOL_ID: 1;  MOL_ID: 1;  
 
    author                                                                                                        author   
 Kabs/Sand         GGG   S SSS HHHHHHHHHTHHHHHHHHHHHHHHHHH TTTT GGG  SSS HHHHHHHHHHHHHHHHHHHHHHHHTB TT BS   HHHH  Kabs/Sand
 chirality   -----++++--++--+--+++++++++++++++++++++++++++-+++--++++-+-+-++++++++++++++++++++++++++---------++++  chirality
     bends         SSS   S SSS SSSSSSSSSSSSSSSSSSSSSSSSSSS SSSS SSS  SSS SSSSSSSSSSSSSSSSSSSSSSSSS  SS  S   SSSS  bends    
     turns        TTTTT       TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT    TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT    TTTTT  turns    
   5-turns                          >>>55<<<                                                                      5-turns  
   3-turns        >>3<<                   >33<         >33< >33X>3<<           >33<           >>3<<>33<           3-turns  
  bridge-2                                                                                                        bridge-2 
  bridge-1                                                                                        A    b          bridge-1 
    sheets                                                                                                        sheets   
   4-turns                    >>4>XX><<>>XXXXXXXXXXX<<>>>XXXXXXXXXXXXXXXXXX<<<<         >>>>X  4-turns  
   summary        gGGGg  S SSShHHHHHHHHHhHHHHHHHHHHHHHHHHHhTTTTgGGGg SSShHHHHHHHHHHHHHHHHHHHHHHHHhBtTTtBS  hHHHH  summary  
  sequence  VHKLEPKDHLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYSEYRELKVEETFNYMGVVLHELYFGMLTPGGKGEPSEALK  sequence 
                    10        20        30        40        50        60        70        80        90       100
 
    author                                                                                                        author   
 Kabs/Sand  HHHHHHTS HHHHHHHHHHHHHH SSEEEEEE TTT  EEEEEESBTTBS  TT EEEEEEE SGGGTHHHHTT HHHHHHHHHHTBBHHHHHHHHHHHH  Kabs/Sand
 chirality  ++++++---++++++++++++++-+----+---++-+---------++-+--++--++---++-+++++++--+++++++++++++--++++++++++++  chirality
     bends  SSSSSSSS SSSSSSSSSSSSSS SS       SSS        SSSSSS  SS   S     SSSSSSSSSSS  SSSSSSSSSS  SSSSSSSSSSSS  bends    
     turns  TTTTTTTTTTTTTTTTTTTTTTTT        TTTTT        TTTT  TTTT        TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  turns    
   5-turns    >5555<                                                           >5555<                             5-turns  
   3-turns                                  >33<         >33<  >33<        >>3<<   >33<>33<   >>3<<>33<           3-turns  
  bridge-2                            BBBBBB                                                                      bridge-2 
  bridge-1                            AAAAAA      AAAAAA C  C      BB*BBBB                        Ab              bridge-1 
    sheets                            AAAAAA      AAAAAA           AAAAAAA                                        sheets   
   4-turns  XXX<<<< >>>>XXXXXXXX<<<<        >444<                           >44>X44<< >>>>XXXX<<<< >>>>XXXXXXXXX  4-turns  
   summary  HHHHHHhthHHHHHHHHHHHHHHhSeEEEEEEeTTTteEEEEEESBTTBS tTTtEEEEEEEegGGGhHHHHhThHHHHHHHHHHhBhHHHHHHHHHHHH  summary  
  sequence  KKIEEDIGGLDACTNELKAAAMAFRGWAILGLDIFSGRLVVNGLDAHNVYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEKAM  sequence 
                   110       120       130       140       150       160       170       180       190       200
 
    author               author   
 Kabs/Sand  HHHHHHTTS    Kabs/Sand
 chirality  +++++++++    chirality
     bends  SSSSSSSSS    bends    
     turns  TTTTTTTTT    turns    
   5-turns               5-turns  
   3-turns   >33<>33<    3-turns  
  bridge-2               bridge-2 
  bridge-1               bridge-1 
    sheets               sheets   
   4-turns  XXX<<<<      4-turns  
   summary  HHHHHHhTt    summary  
  sequence  KAYEALKDFIK  sequence 
                   210