Secondary structure calculation program - copyright by David Keith Smith, 1989
1auyA.pdb
1AUY PLANT VIRUS MOL_ID: 1; MOL_ID: 1;
Sequence length - 163
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 A 27 SER S 0 0 999.9 -51.9 -179.9 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 2 10
2 A 28 PRO P - 0 0 -65.0 145.3 -179.8 -98.3 999.9 111.7 0 0.0 0 0.0 0 0.0 0 0.0 5 16
3 A 29 LEU L e - 0 0 -62.8 139.1 179.3 -163.5 46.2 115.3 0 0.0 155 -0.6 0 0.0 0 0.0 6 19
4 A 30 THR T E E AA - 154 0 -124.5 155.4 176.3 -161.7 8.9 147.0 0 0.0 0 0.0 0 0.0 0 0.0 8 28
5 A 31 ILE I E E AA - 153 0 -129.1 162.1 177.8 -139.3 11.9 157.3 153 -2.0 153 -2.9 0 0.0 0 0.0 8 29
6 A 32 LYS K E E AA - 152 0 -124.5 136.8 178.8 -175.7 17.1 163.2 0 0.0 0 0.0 0 0.0 0 0.0 8 37
7 A 33 GLN Q E E AA - 151 0 -133.5 129.9 179.9 -144.2 15.0 174.5 151 -1.9 151 -3.1 0 0.0 0 0.0 8 34
8 A 34 PRO P E E AA - 150 0 -89.5 161.8 -179.8 -175.3 22.3 127.4 0 0.0 0 0.0 0 0.0 0 0.0 8 33
9 A 35 PHE F E E AA - 149 0 -159.1 154.3 175.5 -166.3 24.9 175.0 149 -2.5 149 -2.4 0 0.0 0 0.0 10 39
10 A 36 GLN Q E E AA - 148 0 -140.8 115.1 179.4 -175.6 18.5 161.0 0 0.0 0 0.0 0 0.0 0 0.0 9 42
11 A 37 SER S E E AA - 147 0 -117.3 143.2 178.3 -119.2 29.9 155.2 147 -2.8 147 -2.5 0 0.0 13 -0.6 10 36
12 A 38 GLU E E E AA + 146 0 -76.4 121.9 -177.9 176.1 33.5 135.6 0 0.0 0 0.0 0 0.0 0 0.0 9 38
13 A 39 VAL V E E A* - 0 0 -100.7 -24.8 -177.4 -7.6 59.6 40.1 145 -3.1 0 0.0 11 -0.6 0 0.0 9 49
14 A 40 LEU L E E AA - 145 0 -174.8 131.0 175.9 -146.1 47.6 152.6 145 -1.9 145 -3.2 0 0.0 0 0.0 7 47
15 A 41 PHE F E E AA + 144 0 -97.4 136.6 -176.3 168.9 43.9 151.8 0 0.0 0 0.0 0 0.0 0 0.0 10 45
16 A 42 ALA A E E AA + 143 0 -150.6 171.9 178.6 80.9 32.6 159.5 143 -2.6 143 -1.9 0 0.0 142 -1.5 12 50
17 A 43 GLY G S S S+ 0 0 121.2 -17.2 -178.6 88.4 75.9 83.9 19 -0.6 0 0.0 0 0.0 0 0.0 18 49
18 A 44 THR T S S S+ 0 0 -89.3 -7.3 -179.8 2.8 100.1 57.7 0 0.0 0 0.0 0 0.0 0 0.0 12 38
19 A 45 LYS K S S S- 0 0 -173.2 152.1 179.6 -82.3 86.4 159.5 0 0.0 17 -0.6 0 0.0 0 0.0 11 34
20 A 46 ASP D + 0 0 -59.7 142.3 -179.4 165.8 58.2 106.9 0 0.0 0 0.0 0 0.0 0 0.0 9 35
21 A 47 ALA A E E BB - 131 0 -160.5 156.5 178.1 -155.2 29.1 173.2 131 -2.9 131 -2.5 0 0.0 0 0.0 9 38
22 A 48 GLU E E E BB - 130 0 -128.7 157.1 179.6 -175.2 15.0 155.9 0 0.0 0 0.0 0 0.0 0 0.0 9 36
23 A 49 ALA A E E BB - 129 0 -155.4 144.4 178.1 -171.9 16.8 171.0 129 -2.0 129 -2.6 0 0.0 0 0.0 9 44
24 A 50 SER S E E BB + 128 0 -138.1 78.3 -179.8 178.0 18.6 130.2 0 0.0 0 0.0 0 0.0 0 0.0 10 43
25 A 51 LEU L E E BB - 127 0 -87.6 131.6 175.1 -148.2 24.9 134.0 127 -1.0 127 -3.7 0 0.0 27 -0.8 9 50
26 A 52 THR T E E BB > T - 126 0 -90.1 109.2 -173.6 -145.5 19.6 154.3 0 0.0 29 -2.7 0 0.0 0 0.0 11 55
27 A 53 ILE I G e > TS+ 0 0 -59.1 -11.5 177.9 80.1 89.8 46.9 125 -1.0 30 -1.0 25 -0.8 0 0.0 10 64
28 A 54 ALA A G T 3 TS+ 0 0 -66.3 -12.1 -178.6 43.0 99.0 49.0 125 -0.7 0 0.0 0 0.0 0 0.0 11 60
29 A 55 ASN N G T < TS+ 0 0 -115.2 0.3 179.6 127.0 78.2 64.7 26 -2.7 0 0.0 0 0.0 0 0.0 8 46
30 A 56 ILE I S h > < TS- 0 0 -63.2 139.6 -179.5 -105.9 72.2 108.3 27 -1.0 34 -2.2 0 0.0 0 0.0 11 44
31 A 57 ASP D H H > TS+ 0 0 -27.8 -63.3 -177.9 41.1 115.6 35.0 0 0.0 35 -3.3 0 0.0 0 0.0 7 30
32 A 58 SER S H H > TS+ 0 0 -63.1 -43.3 179.0 54.6 112.2 23.2 0 0.0 36 -3.1 0 0.0 0 0.0 9 38
33 A 59 VAL V H H > TS+ 0 0 -56.9 -33.1 178.9 44.8 114.7 30.3 0 0.0 37 -1.6 0 0.0 0 0.0 12 52
34 A 60 SER S H H X TS+ 0 0 -75.7 -56.6 -178.9 45.7 112.8 12.1 30 -2.2 38 -0.8 0 0.0 0 0.0 10 41
35 A 61 THR T H H < TS+ 0 0 -58.3 -27.0 -179.4 53.4 114.5 33.9 31 -3.3 0 0.0 0 0.0 0 0.0 7 39
36 A 62 LEU L H H < > TS+ 0 0 -74.5 -43.6 -178.9 43.3 109.4 21.3 32 -3.1 39 -0.6 0 0.0 0 0.0 8 44
37 A 63 THR T H H < > TS+ 0 0 -83.2 5.4 -178.5 107.9 82.9 66.6 33 -1.6 40 -2.1 0 0.0 0 0.0 12 45
38 A 64 THR T T h < 3 TS+ 0 0 -50.3 -43.9 -178.8 36.3 85.0 34.7 34 -0.8 0 0.0 0 0.0 0 0.0 7 37
39 A 65 PHE F T e < TS+ 0 0 -101.6 26.2 -179.6 82.6 106.8 87.6 36 -0.6 157 -0.9 0 0.0 0 0.0 9 34
40 A 66 TYR Y E E AC < T - 156 0 -132.1 146.2 178.9 -155.1 58.5 164.4 37 -2.1 0 0.0 0 0.0 0 0.0 11 37
41 A 67 ARG R E E A* S+ 0 0 -86.7 -22.5 -179.6 38.0 88.2 45.4 155 -3.4 0 0.0 154 -0.7 0 0.0 13 36
42 A 68 HIS H E E AC + 154 0 -136.5 132.9 -179.6 166.7 62.0 171.5 154 -1.6 154 -2.1 0 0.0 0 0.0 13 42
43 A 69 ALA A E E ACD + 153 116 -145.8 135.2 179.8 177.0 4.7 176.2 116 -2.0 115 -3.1 0 0.0 116 -1.7 14 49
44 A 70 SER S E E ACD - 152 114 -139.3 146.5 -179.8 -110.5 31.0 167.4 152 -2.2 152 -2.7 0 0.0 0 0.0 11 57
45 A 71 LEU L E E AC + 151 0 -80.3 133.3 178.5 178.9 24.2 128.0 113 -2.8 0 0.0 0 0.0 0 0.0 13 55
46 A 72 GLU E E E A* S+ 0 0 -95.2 -42.6 179.9 0.8 77.2 35.9 150 -3.7 0 0.0 0 0.0 0 0.0 9 41
47 A 73 SER S E E AC + 150 0 -142.3 157.7 -177.4 174.3 68.4 164.8 150 -0.8 150 -2.1 0 0.0 0 0.0 9 42
48 A 74 LEU L E E AC + 149 0 -170.2 131.1 178.3 157.1 5.1 153.4 0 0.0 106 -3.0 0 0.0 0 0.0 12 59
49 A 75 TRP W E E ACE - 148 105 -155.4 161.7 178.9 -122.2 32.5 171.0 148 -2.7 148 -2.5 0 0.0 0 0.0 11 55
50 A 76 VAL V E E ACE - 147 104 -106.1 145.4 -179.3 -167.1 27.1 147.2 104 -2.7 104 -3.0 0 0.0 0 0.0 13 58
51 A 77 THR T E E ACE - 146 103 -137.9 140.0 -177.0 -148.0 12.7 173.6 146 -2.5 146 -2.1 0 0.0 53 -0.6 13 51
52 A 78 ILE I E E AC - 145 0 -112.8 108.7 180.0 -164.0 9.2 153.4 102 -2.8 0 0.0 0 0.0 0 0.0 12 56
53 A 79 HIS H E E AC - 144 0 -92.5 112.2 -180.0 -149.8 13.2 140.3 144 -2.8 144 -2.4 51 -0.6 0 0.0 13 48
54 A 80 PRO P E E AC - 143 0 -77.0 161.4 179.9 -162.7 16.4 112.0 0 0.0 0 0.0 0 0.0 0 0.0 15 46
55 A 81 THR T e > T - 0 0 -132.0 -175.6 178.6 -73.9 38.3 132.2 142 -2.2 58 -0.6 0 0.0 0 0.0 12 40
56 A 82 LEU L T h > 3 TS+ 0 0 -44.8 -50.9 -178.1 50.0 128.0 30.7 0 0.0 60 -0.6 0 0.0 0 0.0 7 30
57 A 83 GLN Q H H > 3 TS+ 0 0 -63.8 -32.6 -178.2 82.1 90.5 36.1 0 0.0 61 -3.1 0 0.0 0 0.0 14 36
58 A 84 ALA A H H 4 < TS+ 0 0 -41.4 -54.0 -179.7 49.5 89.9 28.8 55 -0.6 0 0.0 0 0.0 0 0.0 17 44
59 A 85 PRO P H H 4 TS+ 0 0 -54.3 -51.4 179.9 40.4 116.7 23.9 0 0.0 0 0.0 0 0.0 0 0.0 10 36
60 A 86 THR T H H < TS+ 0 0 -67.0 -37.5 -178.2 40.1 123.7 30.9 56 -0.6 0 0.0 0 0.0 0 0.0 7 31
61 A 87 PHE F S h < TS- 0 0 -120.9 90.6 179.3 -152.9 77.6 140.5 57 -3.1 0 0.0 0 0.0 0 0.0 13 39
62 A 88 PRO P - 0 0 -53.6 146.7 179.1 -161.9 17.8 104.0 0 0.0 0 0.0 0 0.0 0 0.0 13 44
63 A 89 THR T E E BF - 92 0 -137.3 139.4 178.7 -137.4 16.7 174.2 92 -2.8 92 -0.9 0 0.0 65 -0.7 15 54
64 A 90 THR T E E BFG + 91 132 -96.7 116.1 178.0 173.0 30.0 152.6 132 -2.6 132 -2.5 0 0.0 0 0.0 12 57
65 A 91 VAL V E E BFG - 90 131 -128.2 123.0 -179.4 -171.7 9.1 171.4 90 -2.1 90 -2.9 63 -0.7 0 0.0 12 62
66 A 92 GLY G E E BFG - 89 130 -114.1 140.3 179.2 -174.2 2.8 155.2 130 -2.0 130 -2.1 0 0.0 0 0.0 14 63
67 A 93 VAL V E E BFG + 88 129 -128.0 158.6 178.6 176.3 4.8 155.4 88 -2.4 88 -2.2 0 0.0 0 0.0 15 63
68 A 94 CYS C E E B G - 0 128 -165.6 125.7 178.9 -141.4 20.6 148.5 128 -1.2 128 -1.9 0 0.0 0 0.0 13 58
69 A 95 TRP W E E B G + 0 127 -89.9 145.0 -178.0 163.2 31.6 138.4 0 0.0 0 0.0 0 0.0 0 0.0 12 62
70 A 96 VAL V E E B G - 0 126 -159.9 148.8 179.7 -91.7 45.3 173.3 126 -2.2 126 -2.1 0 0.0 0 0.0 12 52
71 A 97 PRO P E E B G> T - 0 125 -61.7 138.6 -179.4 -116.1 45.5 115.5 0 0.0 74 -3.2 0 0.0 0 0.0 13 45
72 A 98 ALA A T e 3 TS+ 0 0 -48.3 -30.0 -179.6 58.7 115.7 40.0 124 -2.8 0 0.0 0 0.0 0 0.0 10 41
73 A 99 GLN Q T T 3 TS+ 0 0 -82.9 0.3 178.1 112.2 76.9 65.5 0 0.0 0 0.0 0 0.0 0 0.0 8 32
74 A 100 SER S t < T - 0 0 -75.8 128.7 -179.8 -148.9 61.2 129.6 71 -3.2 0 0.0 0 0.0 0 0.0 7 34
75 A 101 PRO P + 0 0 -74.1 -7.7 -179.5 120.5 58.8 59.9 0 0.0 0 0.0 0 0.0 0 0.0 4 29
76 A 102 VAL V - 0 0 -58.6 155.2 -178.7 -153.7 49.1 100.2 0 0.0 0 0.0 0 0.0 0 0.0 7 34
77 A 103 THR T g > T - 0 0 -127.5 168.5 -179.4 -98.4 32.0 147.5 0 0.0 80 -3.1 0 0.0 0 0.0 8 36
78 A 104 PRO P G G > TS+ 0 0 -56.8 -33.2 179.1 65.8 121.0 32.7 0 0.0 81 -1.5 0 0.0 0 0.0 14 40
79 A 105 ALA A G G 3 TS+ 0 0 -62.5 -13.5 -178.8 48.8 104.2 47.5 0 0.0 0 0.0 0 0.0 0 0.0 5 33
80 A 106 GLN Q G G > X T + 0 0 -119.4 32.8 -179.8 120.0 69.0 88.6 77 -3.1 83 -1.1 0 0.0 84 -0.7 8 31
81 A 107 ILE I G G 4 X TS+ 0 0 -61.1 -56.9 179.3 48.0 77.2 16.4 78 -1.5 84 -2.0 0 0.0 0 0.0 17 36
82 A 108 THR T G G 4 3 TS+ 0 0 -65.3 1.0 177.6 55.6 111.1 63.0 0 0.0 0 0.0 0 0.0 0 0.0 8 27
83 A 109 LYS K G G 4 < TS+ 0 0 -103.4 -13.9 179.4 78.2 97.7 56.6 80 -1.1 0 0.0 0 0.0 0 0.0 6 23
84 A 110 THR T S g < < TS- 0 0 -96.6 149.2 -178.9 -119.1 86.5 133.2 81 -2.0 0 0.0 80 -0.7 0 0.0 9 31
85 A 111 TYR Y S S S+ 0 0 -52.8 -57.6 178.6 42.4 111.0 28.0 0 0.0 0 0.0 0 0.0 0 0.0 6 32
86 A 112 GLY G S S S+ 0 0 -57.6 -38.0 -177.9 132.9 90.9 26.0 0 0.0 0 0.0 0 0.0 0 0.0 8 41
87 A 113 GLY G + 0 0 -22.1 126.6 178.4 166.7 25.5 70.1 0 0.0 0 0.0 0 0.0 0 0.0 12 40
88 A 114 GLN Q E E BF - 67 0 -149.1 135.7 -179.9 -158.8 18.5 174.1 67 -2.2 67 -2.4 0 0.0 90 -0.5 9 41
89 A 115 ILE I E E BF - 66 0 -119.9 120.1 178.8 -171.3 14.1 166.2 0 0.0 0 0.0 0 0.0 0 0.0 10 46
90 A 116 PHE F E E BF - 65 0 -105.9 163.6 176.8 -138.8 23.8 132.3 65 -2.9 65 -2.1 88 -0.5 0 0.0 8 48
91 A 117 CYS C E E BF > T - 64 0 -119.0 72.7 179.5 -162.4 28.3 135.1 0 0.0 94 -1.7 0 0.0 0 0.0 11 47
92 A 118 ILE I E E BF 3 TS+ 63 0 -55.5 144.3 -178.3 29.5 78.4 106.7 63 -0.9 63 -2.8 0 0.0 0 0.0 15 51
93 A 119 GLY G T T 3 TS+ 0 0 81.9 -4.8 -179.8 112.8 108.9 68.3 97 -1.5 0 0.0 0 0.0 0 0.0 17 43
94 A 120 GLY G S t X TS- 0 0 -106.1 155.2 -179.2 -63.6 88.2 135.7 91 -1.7 97 -2.4 0 0.0 0 0.0 11 34
95 A 121 ALA A T T 3 TS+ 0 0 -37.3 92.1 179.9 2.1 129.5 91.0 0 0.0 0 0.0 0 0.0 0 0.0 6 22
96 A 122 ILE I T T 3 TS+ 0 0 90.1 36.8 178.3 87.5 115.7 48.8 0 0.0 0 0.0 0 0.0 0 0.0 7 26
97 A 123 GLN Q t < T + 0 0 -148.0 24.9 176.0 81.9 62.1 87.1 94 -2.4 93 -1.5 0 0.0 0 0.0 11 39
98 A 124 THR T + 0 0 -132.4 69.3 179.5 100.8 68.8 135.1 0 0.0 0 0.0 0 0.0 0 0.0 13 36
99 A 125 LEU L S S S- 0 0 -153.5 133.8 -176.5 -125.1 72.4 155.7 0 0.0 0 0.0 0 0.0 0 0.0 8 30
100 A 126 SER S S S S+ 0 0 -52.6 -63.3 180.0 68.2 95.9 26.8 0 0.0 102 -3.6 0 0.0 0 0.0 8 33
101 A 127 PRO P + 0 0 -64.5 69.5 176.2 143.1 55.8 108.3 0 0.0 103 -1.0 0 0.0 0 0.0 7 28
102 A 128 LEU L e + 0 0 -104.8 82.9 -176.6 169.3 36.2 156.0 100 -3.6 52 -2.8 0 0.0 0 0.0 9 41
103 A 129 ILE I E E AE - 51 0 -107.2 147.7 175.1 -170.3 33.7 147.3 101 -1.0 0 0.0 0 0.0 0 0.0 8 43
104 A 130 VAL V E E AE - 50 0 -137.8 101.5 -178.9 -146.0 20.8 153.9 50 -3.0 50 -2.7 0 0.0 0 0.0 8 44
105 A 131 LYS K E E AE - 49 0 -66.0 145.6 178.0 -123.8 15.5 111.8 0 0.0 0 0.0 0 0.0 0 0.0 7 43
106 A 132 CYS C e - 0 0 -94.2 127.4 179.9 -129.8 16.3 146.0 48 -3.0 108 -1.9 0 0.0 0 0.0 10 51
107 A 133 PRO P g > T + 0 0 -74.9 83.1 -178.3 176.5 31.2 122.2 0 0.0 110 -1.9 0 0.0 0 0.0 7 41
108 A 134 LEU L G G > TS+ 0 0 -60.7 -29.5 -179.3 64.6 76.0 33.0 106 -1.9 111 -2.3 0 0.0 0 0.0 11 40
109 A 135 GLU E G G 3 TS+ 0 0 -66.6 -14.7 -179.7 58.1 97.5 46.3 0 0.0 0 0.0 0 0.0 0 0.0 5 25
110 A 136 MET M G G < TS+ 0 0 -93.6 1.5 -179.9 20.2 117.9 65.7 107 -1.9 0 0.0 0 0.0 0 0.0 6 31
111 A 137 MET M S g < TS- 0 0 -150.1 -167.8 -177.5 -68.8 93.9 144.4 108 -2.3 0 0.0 0 0.0 0 0.0 11 36
112 A 138 GLN Q - 0 0 -100.5 108.6 -179.2 -173.2 33.2 144.8 123 -2.5 0 0.0 0 0.0 0 0.0 12 38
113 A 139 PRO P e + 0 0 -78.0 -9.0 179.2 107.2 52.2 58.0 0 0.0 45 -2.8 0 0.0 0 0.0 10 47
114 A 140 ARG R E E AD + 44 0 -70.9 122.7 179.1 171.4 38.0 126.4 0 0.0 0 0.0 0 0.0 0 0.0 11 50
115 A 141 VAL V E E A* + 0 0 -110.9 -4.0 177.5 32.1 66.9 63.1 43 -3.1 0 0.0 0 0.0 0 0.0 12 54
116 A 142 LYS K E E AD S+ 43 0 -153.8 124.0 -178.0 131.6 73.6 152.8 43 -1.7 43 -2.0 0 0.0 0 0.0 12 45
117 A 143 ASP D - 0 0 -155.0 -175.6 179.0 -85.4 68.5 152.0 0 0.0 0 0.0 0 0.0 0 0.0 9 34
118 A 144 SER S S S S+ 0 0 -74.4 -15.3 -179.1 45.9 115.4 49.8 0 0.0 0 0.0 0 0.0 0 0.0 6 22
119 A 145 ILE I S S S- 0 0 -128.1 156.8 -179.6 -111.0 90.5 154.8 0 0.0 121 -0.5 0 0.0 0 0.0 5 18
120 A 146 GLN Q - 0 0 -87.4 124.8 179.4 -147.9 33.1 138.2 0 0.0 0 0.0 0 0.0 0 0.0 6 23
121 A 147 TYR Y - 0 0 -96.6 148.5 -178.8 -157.1 11.4 135.9 119 -0.5 0 0.0 0 0.0 0 0.0 8 29
122 A 148 LEU L S S S+ 0 0 -91.3 -21.7 -177.2 50.5 86.1 46.2 0 0.0 0 0.0 0 0.0 0 0.0 7 28
123 A 149 ASP D + 0 0 -111.7 33.9 178.1 139.8 68.6 94.5 0 0.0 112 -2.5 0 0.0 0 0.0 10 36
124 A 150 SER S e - 0 0 -66.6 164.7 -179.9 -72.2 69.0 103.2 0 0.0 72 -2.8 0 0.0 0 0.0 16 48
125 A 151 PRO P E E B G - 0 71 -66.6 141.2 177.8 -173.5 53.0 113.2 0 0.0 27 -1.0 0 0.0 28 -0.7 16 56
126 A 152 LYS K E E BBG - 26 70 -133.1 131.0 -179.7 -144.9 11.9 178.2 70 -2.1 70 -2.2 0 0.0 0 0.0 13 59
127 A 153 LEU L E E BBG - 25 69 -99.8 140.8 178.0 -156.5 5.6 139.7 25 -3.7 25 -1.0 0 0.0 0 0.0 13 68
128 A 154 LEU L E E BBG - 24 68 -116.3 128.1 178.5 -173.7 12.0 165.6 68 -1.9 68 -1.2 0 0.0 0 0.0 16 61
129 A 155 ILE I E E BBG - 23 67 -124.1 143.5 -179.2 -177.2 9.0 164.4 23 -2.6 23 -2.0 0 0.0 0 0.0 13 62
130 A 156 SER S E E BBG - 22 66 -143.1 96.4 179.2 -178.1 5.5 145.4 66 -2.1 66 -2.0 0 0.0 0 0.0 14 53
131 A 157 ILE I E E BBG - 21 65 -96.6 137.2 177.8 -178.4 4.6 143.0 21 -2.5 21 -2.9 0 0.0 0 0.0 14 57
132 A 158 THR T E E B G - 0 64 -137.5 109.4 -176.4 -160.7 18.0 165.1 64 -2.5 64 -2.6 0 0.0 0 0.0 11 44
133 A 159 ALA A - 0 0 -90.6 171.4 177.6 -77.8 29.6 114.3 0 0.0 0 0.0 0 0.0 0 0.0 13 41
134 A 160 GLN Q - 0 0 -64.0 136.8 179.6 -128.4 39.1 113.2 0 0.0 0 0.0 0 0.0 0 0.0 12 32
135 A 161 PRO P S S S+ 0 0 -56.3 -40.0 177.5 57.8 109.6 25.6 0 0.0 137 -1.4 0 0.0 0 0.0 5 22
136 A 162 THR T S S S- 0 0 -92.7 90.3 -176.8 -136.3 105.1 140.8 0 0.0 0 0.0 0 0.0 0 0.0 4 22
137 A 163 ALA A - 0 0 -52.1 150.1 179.4 -112.4 6.4 89.9 135 -1.4 0 0.0 0 0.0 0 0.0 10 29
138 A 164 PRO P - 0 0 -79.0 160.7 179.9 -118.8 23.8 113.8 0 0.0 0 0.0 0 0.0 0 0.0 11 32
139 A 165 PRO P S S S+ 0 0 -63.5 -46.6 -179.4 7.8 96.2 22.3 0 0.0 0 0.0 0 0.0 0 0.0 6 24
140 A 166 ALA A S S S- 0 0 -128.5 178.5 -178.9 -61.6 103.0 136.2 0 0.0 0 0.0 0 0.0 0 0.0 7 30
141 A 167 SER S - 0 0 -67.5 140.2 -179.2 -150.7 32.1 109.6 0 0.0 0 0.0 0 0.0 0 0.0 13 42
142 A 168 THR T S e S+ 0 0 -86.6 -16.6 -179.7 11.2 76.2 55.4 16 -1.5 55 -2.2 0 0.0 0 0.0 19 50
143 A 169 CYS C E E AAC - 16 54 -164.9 144.6 179.1 -135.7 61.4 162.2 16 -1.9 16 -2.6 0 0.0 0 0.0 14 56
144 A 170 ILE I E E AAC - 15 53 -102.5 132.5 179.9 -150.0 21.9 153.0 53 -2.4 53 -2.8 0 0.0 146 -0.6 14 54
145 A 171 ILE I E E AAC + 14 52 -108.7 121.9 180.0 176.8 19.9 156.3 14 -3.2 13 -3.1 0 0.0 14 -1.9 13 62
146 A 172 THR T E E AAC - 12 51 -124.1 157.5 179.3 -142.4 23.6 145.8 51 -2.1 51 -2.5 144 -0.6 0 0.0 13 54
147 A 173 VAL V E E AAC - 11 50 -119.8 122.4 -179.6 -177.7 24.9 170.4 11 -2.5 11 -2.8 0 0.0 0 0.0 12 56
148 A 174 SER S E E AAC + 10 49 -120.4 156.2 178.6 118.3 15.8 148.2 49 -2.5 49 -2.7 0 0.0 0 0.0 12 53
149 A 175 GLY G E E AAC - 9 48 177.8 -167.1 179.8 -85.7 48.8 172.1 9 -2.4 9 -2.5 0 0.0 0 0.0 12 52
150 A 176 THR T E E AAC - 8 47 -135.6 131.7 179.4 -155.5 25.0 173.1 47 -2.1 46 -3.7 0 0.0 47 -0.8 12 44
151 A 177 LEU L E E AAC - 7 45 -106.6 141.8 176.9 -157.2 3.8 146.7 7 -3.1 7 -1.9 0 0.0 153 -0.6 15 50
152 A 178 SER S E E AAC + 6 44 -114.2 114.7 -177.5 176.7 28.9 172.2 44 -2.7 44 -2.2 0 0.0 0 0.0 12 42
153 A 179 MET M E E AAC + 5 43 -124.2 161.7 179.1 159.7 11.1 151.2 5 -2.9 5 -2.0 151 -0.6 0 0.0 13 40
154 A 180 HIS H E E AAC + 4 42 -167.9 168.3 -179.2 56.2 39.1 168.4 42 -2.1 42 -1.6 0 0.0 41 -0.7 12 32
155 A 181 SER S E E A * S- 0 0 64.7 97.7 -179.1 -108.2 79.0 17.5 3 -0.6 41 -3.4 0 0.0 0 0.0 10 28
156 A 182 PRO P E E A C - 0 40 -62.3 130.4 176.7 -137.6 17.9 103.0 0 0.0 158 -0.5 0 0.0 0 0.0 7 27
157 A 183 LEU L e - 0 0 -82.2 125.7 -178.9 -131.9 23.2 139.8 39 -0.9 159 -1.5 0 0.0 0 0.0 8 26
158 A 184 ILE I + 0 0 -85.6 86.8 178.7 123.5 58.4 130.5 156 -0.5 0 0.0 0 0.0 0 0.0 5 16
159 A 185 THR T - 0 0 -116.8 -147.2 -179.9 -55.1 69.4 100.5 157 -1.5 161 -0.5 0 0.0 0 0.0 5 16
160 A 186 ASP D - 0 0 -104.3 120.4 178.2 -173.9 35.2 152.3 0 0.0 0 0.0 0 0.0 0 0.0 5 13
161 A 187 THR T + 0 0 -95.6 15.7 178.3 109.0 58.5 82.8 159 -0.5 0 0.0 0 0.0 0 0.0 4 13
162 A 188 SER S 0 0 -55.0 -37.7 179.1 999.9 999.9 24.8 0 0.0 0 0.0 0 0.0 0 0.0 3 9
163 A 189 THR T 0 0 -161.2 999.9 999.9 999.9 999.9 169.3 0 0.0 0 0.0 0 0.0 0 0.0 3 12
1auyA.pdb
1AUY PLANT VIRUS MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand EEEEEEEEEEEEESSS EEEEEEGGGSHHHHHHHTTEEEEEEEEEEEEEEE THHHHS EEEEEEEEETT GGGGGGSSS EEEEETSTT SS Kabs/Sand
chirality ----------+--++++-+---+--+++-+++++++++-+++-++++-------+++++---+--+-+--++-+--++++++-+++----++-++++-+ chirality
bends SSS SSSSSSSSSSSSS S S SSSSSS SS SS SSSSSS SSSSS SS bends
turns TTTTTTTTTTTTTTT TTTTTTT TTTT TTTTTTTT TTTTTTT turns
5-turns 5-turns
3-turns >>3<< >>3<< >33< >33< >>3XX3<< >33X33< 3-turns
bridge-2 DD EEE GGGGGGGG bridge-2
bridge-1 AAAAAAAAA*AAA BBBBBB C*CCCC*CCCCCCCC FFFFF FFFFF bridge-1
sheets AAAAAAAAAAAAA BBBBBB AAAAAAAAAAAAAAA BBBBBBBBB BBBBB sheets
4-turns >>>>X<<<< >>44<< >444< 4-turns
summary eEEEEEEEEEEEEESSS EEEEEEeTThHHHHHHHheEEEEEEEEEEEEEEEehHHHHh EEEEEEEEEeTt gGGGGGGgSS EEEEETtTTt SS summary
sequence SPLTIKQPFQSEVLFAGTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTLQAPTFPTTVGVCWVPAQSPVTPAQITKTYGGQIFCIGGAIQTLS sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand EEE GGGS EEE SS S EEEEEEEE SS SS SEEEEEEEEEEEEEE Kabs/Sand
chirality ++----++++--++++-+---++-----------+---+--+--+--+---+++---+--+ chirality
bends SSSS S SS S SS SS S S bends
turns TTTTT turns
5-turns 5-turns
3-turns >>3<< 3-turns
bridge-2 GGGGGGGG CCCCCCCCCCCC*C bridge-2
bridge-1 EEE D*D BBBBBB AAAAAAAAAAAA bridge-1
sheets AAA AAA BBBBBBBB AAAAAAAAAAAAAA sheets
4-turns 4-turns
summary eEEEegGGGg eEEE SS S eEEEEEEEE SS SS eEEEEEEEEEEEEEEe summary
sequence PLIVKCPLEMMQPRVKDSIQYLDSPKLLISITAQPTAPPASTCIITVSGTLSMHSPLITDTST sequence
110 120 130 140 150 160