Secondary structure calculation program - copyright by David Keith Smith, 1989
1ad2-.pdb
1AD2 RIBOSOMAL PROTEIN MOL_ID: 1; MOL_ID: 1;
Sequence length - 224
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 5 LYS K 0 0 999.9 128.0 178.1 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 3 10
2 6 ARG R + 0 0 -167.8 47.6 -176.5 62.2 999.9 97.5 0 0.0 0 0.0 0 0.0 0 0.0 3 16
3 7 TYR Y t > T + 0 0 -167.0 20.5 -179.5 105.6 51.9 68.6 0 0.0 7 -1.5 0 0.0 0 0.0 6 20
4 8 ARG R T T 4 TS+ 0 0 -76.4 -29.9 -178.1 44.5 95.8 28.8 0 0.0 0 0.0 0 0.0 0 0.0 7 18
5 9 ALA A T T > TS+ 0 0 -81.2 -27.3 179.6 57.0 109.5 41.0 0 0.0 9 -0.5 0 0.0 0 0.0 6 20
6 10 LEU L T T 4 > TS+ 0 0 -73.0 -36.7 180.0 53.4 104.2 32.6 0 0.0 9 -0.5 0 0.0 0 0.0 10 27
7 11 LEU L T T < 3 TS+ 0 0 -76.2 -15.3 -178.9 63.0 98.8 54.0 3 -1.5 0 0.0 0 0.0 0 0.0 8 28
8 12 GLU E T T 4 3 TS+ 0 0 -82.8 -23.1 -178.4 58.1 95.6 40.8 0 0.0 0 0.0 0 0.0 0 0.0 7 22
9 13 LYS K S t < < TS+ 0 0 -81.6 -13.3 -177.9 69.3 97.8 54.3 5 -0.5 0 0.0 6 -0.5 0 0.0 6 30
10 14 VAL V - 0 0 -114.8 125.7 176.1 -151.9 65.9 158.7 0 0.0 0 0.0 0 0.0 0 0.0 8 34
11 15 ASP D t > T - 0 0 -91.6 115.2 -179.3 -158.9 10.9 148.5 0 0.0 14 -1.3 0 0.0 0 0.0 6 28
12 16 PRO P T T 3 TS+ 0 0 -69.2 -18.1 179.8 51.7 88.4 48.6 0 0.0 0 0.0 0 0.0 0 0.0 6 29
13 17 ASN N T T 3 TS+ 0 0 -102.3 10.9 179.8 97.3 91.3 74.7 0 0.0 0 0.0 0 0.0 0 0.0 4 20
14 18 LYS K t < T - 0 0 -104.4 134.3 177.1 -145.7 64.5 145.8 11 -1.3 16 -0.8 0 0.0 0 0.0 6 27
15 19 ILE I - 0 0 -96.5 107.2 -179.2 -152.3 28.4 156.5 0 0.0 0 0.0 0 0.0 0 0.0 8 32
16 20 TYR Y B B a - 220 0 -80.8 155.0 176.9 -116.7 12.8 117.5 219 -3.1 221 -2.8 14 -0.8 0 0.0 10 34
17 21 THR T h > T - 0 0 -81.9 160.5 -179.2 -108.3 34.9 122.5 0 0.0 21 -2.2 0 0.0 0 0.0 10 37
18 22 ILE I H H > TS+ 0 0 -59.4 -36.4 179.4 52.3 119.6 29.4 0 0.0 22 -2.2 0 0.0 0 0.0 13 46
19 23 ASP D H H > TS+ 0 0 -68.8 -40.9 176.4 48.4 109.2 26.9 0 0.0 23 -1.5 0 0.0 0 0.0 10 40
20 24 GLU E H H > TS+ 0 0 -63.4 -44.4 -179.8 47.4 113.5 22.6 0 0.0 24 -3.1 0 0.0 0 0.0 8 38
21 25 ALA A H H X TS+ 0 0 -63.6 -38.9 -179.9 57.1 107.2 29.6 17 -2.2 25 -3.4 0 0.0 0 0.0 12 55
22 26 ALA A H H X TS+ 0 0 -60.4 -39.9 178.1 38.9 114.1 30.3 18 -2.2 26 -0.6 0 0.0 0 0.0 12 53
23 27 HIS H H H X > TS+ 0 0 -76.0 -44.7 -178.8 47.7 118.9 22.6 19 -1.5 27 -0.7 0 0.0 26 -0.5 9 38
24 28 LEU L H H < > TS+ 0 0 -64.1 -42.8 -178.3 60.9 102.9 27.1 20 -3.1 27 -1.2 0 0.0 0 0.0 8 49
25 29 VAL V H H X > TS+ 0 0 -58.0 -30.3 179.1 61.3 96.2 37.4 21 -3.4 28 -1.3 0 0.0 29 -1.0 13 58
26 30 LYS K H H < < TS+ 0 0 -67.4 -28.8 178.8 52.2 102.5 31.9 22 -0.6 0 0.0 23 -0.5 0 0.0 11 47
27 31 GLU E T h < < TS+ 0 0 -84.5 -2.5 179.6 53.6 106.1 67.2 24 -1.2 0 0.0 23 -0.7 0 0.0 7 43
28 32 LEU L T T 4 < TS+ 0 0 -101.9 -19.6 -178.9 70.9 94.5 54.1 25 -1.3 0 0.0 0 0.0 0 0.0 10 45
29 33 ALA A t < T + 0 0 -89.6 35.4 177.9 136.7 56.8 99.1 25 -1.0 31 -1.9 0 0.0 0 0.0 10 46
30 34 THR T + 0 0 -84.5 79.3 -179.9 103.8 43.8 130.0 0 0.0 0 0.0 0 0.0 0 0.0 6 33
31 35 ALA A S S S- 0 0 -143.9 -179.1 180.0 -57.8 79.9 145.5 29 -1.9 0 0.0 0 0.0 0 0.0 6 29
32 36 LYS K S S S- 0 0 -65.9 159.3 -179.6 -6.7 97.0 104.7 0 0.0 0 0.0 0 0.0 0 0.0 5 26
33 37 PHE F S S S- 0 0 46.4 -168.9 179.5 -41.6 108.5 78.9 0 0.0 35 -0.8 0 0.0 0 0.0 5 29
34 38 ASP D - 0 0 -96.2 107.8 -178.2 -143.2 63.2 147.1 0 0.0 0 0.0 0 0.0 0 0.0 9 40
35 39 GLU E e - 0 0 -71.1 136.6 177.7 -121.2 13.4 115.3 33 -0.8 174 -3.0 0 0.0 0 0.0 13 43
36 40 THR T E E AA - 173 0 -79.7 134.5 178.9 -143.9 21.4 128.7 0 0.0 0 0.0 0 0.0 0 0.0 13 53
37 41 VAL V E E AA - 172 0 -101.4 133.7 -179.2 -174.5 21.6 153.6 172 -2.5 171 -3.2 0 0.0 172 -0.9 13 63
38 42 GLU E E E AAB - 170 211 -127.7 155.2 176.7 -141.1 21.9 154.5 211 -2.8 211 -2.4 0 0.0 0 0.0 12 63
39 43 VAL V E E AAB - 169 210 -113.6 135.7 -179.9 -170.6 23.1 159.0 169 -2.2 169 -1.7 0 0.0 0 0.0 13 65
40 44 HIS H E E AAB - 168 209 -127.1 144.7 179.8 -174.2 2.9 167.7 209 -2.9 209 -3.1 0 0.0 0 0.0 12 56
41 45 ALA A E E AAB - 167 208 -144.7 146.5 176.3 -139.3 25.0 170.4 167 -2.4 167 -1.8 0 0.0 43 -0.6 12 53
42 46 LYS K E E AAB - 166 207 -100.1 118.4 -177.5 -151.7 34.5 161.6 207 -2.1 206 -2.0 0 0.0 207 -0.9 11 44
43 47 LEU L E E A B - 0 205 -98.9 149.5 179.3 -124.0 19.8 136.7 165 -2.2 45 -1.9 41 -0.6 0 0.0 12 47
44 48 GLY G S e S+ 0 0 -87.7 70.3 -179.9 110.7 72.4 120.5 204 -2.6 0 0.0 0 0.0 0 0.0 12 38
45 49 ILE I S S S- 0 0 -136.8 166.5 176.1 -113.1 75.0 152.1 43 -1.9 0 0.0 0 0.0 0 0.0 10 37
46 50 ASP D t > T - 0 0 -100.1 106.0 -179.6 -159.2 28.0 157.1 0 0.0 49 -1.9 0 0.0 0 0.0 8 31
47 51 PRO P T T 3 TS+ 0 0 -61.9 -17.3 179.1 61.1 87.4 48.5 0 0.0 0 0.0 0 0.0 0 0.0 12 29
48 52 ARG R T T 3 TS+ 0 0 -88.0 -2.9 179.3 87.3 87.8 62.6 0 0.0 50 -0.6 0 0.0 0 0.0 5 21
49 53 ARG R g X T - 0 0 -101.2 117.6 179.2 -156.9 64.2 152.4 46 -1.9 52 -1.8 0 0.0 0 0.0 7 24
50 54 SER S G G > TS+ 0 0 -62.3 -29.9 179.0 58.7 92.9 36.4 48 -0.6 53 -1.1 0 0.0 0 0.0 6 23
51 55 ASP D G G 3 TS+ 0 0 -80.8 3.8 178.6 48.9 107.1 68.8 0 0.0 0 0.0 0 0.0 0 0.0 6 23
52 56 GLN Q G G < TS+ 0 0 -123.7 11.7 178.0 119.1 83.6 79.8 49 -1.8 0 0.0 0 0.0 0 0.0 12 36
53 57 ASN N g < T - 0 0 -80.1 149.8 -177.9 -139.6 55.3 118.7 50 -1.1 0 0.0 0 0.0 0 0.0 12 39
54 58 VAL V e + 0 0 -116.6 123.2 -179.0 152.2 33.0 165.5 0 0.0 161 -1.7 0 0.0 0 0.0 10 48
55 59 ARG R E E BC + 160 0 -148.3 136.0 -179.4 113.1 18.9 170.7 0 0.0 0 0.0 0 0.0 0 0.0 9 41
56 60 GLY G E E BC - 159 0 -179.9 -172.0 -179.7 -96.3 49.6 168.1 159 -2.3 159 -2.8 0 0.0 0 0.0 9 36
57 61 THR T E E BC - 158 0 -131.5 153.8 177.2 -156.1 18.0 157.6 0 0.0 0 0.0 0 0.0 0 0.0 9 43
58 62 VAL V E E BC - 157 0 -130.5 133.0 177.8 -144.7 12.8 177.4 157 -2.1 157 -1.9 0 0.0 60 -1.0 11 45
59 63 SER S E E BC - 156 0 -94.9 96.1 -178.7 -147.6 26.9 147.2 0 0.0 0 0.0 0 0.0 0 0.0 8 41
60 64 LEU L e - 0 0 -67.2 136.0 179.5 -134.9 9.5 117.4 58 -1.0 0 0.0 155 -0.5 0 0.0 13 45
61 65 PRO P S S S+ 0 0 -63.2 -23.6 -178.8 39.6 84.5 38.7 0 0.0 0 0.0 0 0.0 0 0.0 8 37
62 66 HIS H S S S+ 0 0 -132.7 145.4 177.6 15.3 108.3 164.5 0 0.0 0 0.0 0 0.0 0 0.0 7 38
63 67 GLY G S S S+ 0 0 91.2 -18.4 -179.5 83.8 96.9 81.1 0 0.0 0 0.0 0 0.0 0 0.0 8 45
64 68 LEU L + 0 0 -111.6 -174.2 179.0 44.3 58.6 113.4 0 0.0 0 0.0 0 0.0 0 0.0 13 44
65 69 GLY G S t > TS- 0 0 88.8 -146.2 -178.5 -4.5 109.2 123.6 152 -1.3 68 -1.2 0 0.0 0 0.0 10 37
66 70 LYS K T T 3 TS+ 0 0 -51.5 -53.6 -178.9 61.2 124.3 32.8 0 0.0 0 0.0 0 0.0 0 0.0 8 30
67 71 GLN Q T T 3 TS+ 0 0 -52.0 -26.9 -179.7 100.6 80.9 43.3 0 0.0 0 0.0 0 0.0 0 0.0 6 28
68 72 VAL V S t < TS- 0 0 -67.4 123.5 178.9 -143.1 70.3 120.3 65 -1.2 70 -0.8 0 0.0 0 0.0 12 38
69 73 ARG R e - 0 0 -90.3 107.4 -178.5 -156.4 19.6 144.5 0 0.0 107 -2.4 0 0.0 108 -1.3 12 37
70 74 VAL V E E Cd - 108 0 -93.4 129.5 175.6 -159.3 9.8 137.3 68 -0.8 89 -2.3 0 0.0 72 -0.5 13 55
71 75 LEU L E E Cde - 109 89 -103.7 122.5 178.9 -164.6 10.9 159.1 108 -2.7 110 -2.3 0 0.0 0 0.0 14 61
72 76 ALA A E E Cde - 110 90 -110.2 127.9 179.6 -165.8 4.2 161.2 89 -2.7 91 -2.0 70 -0.5 74 -0.5 14 63
73 77 ILE I E E Cde + 111 91 -113.7 123.4 -177.0 137.0 30.5 165.3 110 -2.2 112 -1.4 0 0.0 0 0.0 15 62
74 78 ALA A e - 0 0 -151.4 -174.2 179.3 -124.2 39.2 145.9 91 -2.0 0 0.0 72 -0.5 0 0.0 15 49
75 79 LYS K t > T - 0 0 -143.0 153.8 178.6 -10.3 61.8 168.2 0 0.0 78 -1.6 0 0.0 0 0.0 11 36
76 80 GLY G T h > > TS- 0 0 62.7 -137.9 180.0 -11.0 126.3 105.7 0 0.0 79 -1.4 0 0.0 80 -0.5 6 26
77 81 GLU E H H > 3 TS+ 0 0 -73.1 -6.3 178.9 79.7 123.1 52.9 0 0.0 81 -1.6 0 0.0 0 0.0 6 27
78 82 LYS K H H > < TS+ 0 0 -71.7 -20.8 177.9 61.1 83.9 44.0 75 -1.6 82 -1.9 0 0.0 0 0.0 11 37
79 83 ILE I H H > < TS+ 0 0 -68.8 -42.7 178.6 48.6 105.1 20.7 76 -1.4 83 -2.2 0 0.0 0 0.0 14 41
80 84 LYS K H H X TS+ 0 0 -62.0 -42.4 178.2 51.6 109.6 27.5 76 -0.5 84 -2.7 0 0.0 0 0.0 8 29
81 85 GLU E H H X TS+ 0 0 -61.4 -41.4 179.6 49.7 109.8 26.2 77 -1.6 85 -2.2 0 0.0 0 0.0 10 34
82 86 ALA A H H < >TS+ 0 0 -65.9 -39.9 178.9 48.2 111.7 26.4 78 -1.9 87 -1.9 0 0.0 0 0.0 15 44
83 87 GLU E H H < >5TS+ 0 0 -64.8 -46.5 -179.4 50.5 111.0 20.0 79 -2.2 86 -1.4 0 0.0 0 0.0 9 35
84 88 GLU E H H < 35TS+ 0 0 -59.2 -39.9 179.2 56.1 106.4 28.1 80 -2.7 0 0.0 0 0.0 0 0.0 8 29
85 89 ALA A T h < 35TS- 0 0 -70.6 -10.8 178.2 -110.6 118.5 57.8 81 -2.2 0 0.0 0 0.0 0 0.0 10 37
86 90 GLY G T T <5T + 0 0 89.0 25.0 177.2 172.3 49.6 39.1 83 -1.4 0 0.0 0 0.0 0 0.0 8 39
87 91 ALA A t T - 0 0 -91.1 -161.0 179.6 -63.8 67.9 102.2 0 0.0 95 -2.1 0 0.0 0 0.0 10 38
93 97 GLU E G G > TS+ 0 0 -60.3 -20.7 179.8 78.6 126.2 43.5 0 0.0 96 -1.9 0 0.0 0 0.0 11 37
94 98 GLU E G G 3 TS+ 0 0 -59.8 -21.7 -177.7 65.9 82.9 42.3 0 0.0 0 0.0 0 0.0 0 0.0 7 29
95 99 ILE I G h > X TS+ 0 0 -78.3 -13.7 178.2 76.8 81.0 46.3 92 -2.1 99 -1.5 0 0.0 98 -0.5 9 37
96 100 ILE I H H > < TS+ 0 0 -61.6 -39.0 178.2 55.0 91.1 24.2 93 -1.9 100 -2.4 0 0.0 0 0.0 10 42
97 101 GLN Q H H > 3 TS+ 0 0 -63.5 -32.5 178.7 56.4 103.5 39.0 0 0.0 101 -1.4 0 0.0 0 0.0 7 27
98 102 LYS K H H 4 <>TS+ 0 0 -66.5 -41.7 178.6 44.2 109.3 27.3 95 -0.5 103 -2.2 0 0.0 0 0.0 9 27
99 103 ILE I H H < >5TS+ 0 0 -68.5 -38.6 178.5 55.4 111.1 27.9 95 -1.5 102 -1.5 0 0.0 0 0.0 9 38
100 104 LEU L H H < 35TS+ 0 0 -62.7 -32.8 179.4 55.0 103.8 35.4 96 -2.4 0 0.0 0 0.0 0 0.0 8 26
101 105 ASP D T h < 35TS- 0 0 -84.4 5.8 178.2 -83.0 135.1 73.3 97 -1.4 0 0.0 0 0.0 0 0.0 6 17
102 106 GLY G T T <5TS+ 0 0 111.0 -0.8 178.9 143.7 79.1 61.2 99 -1.5 0 0.0 0 0.0 0 0.0 6 16
103 107 TRP W t > T - 0 0 -89.1 151.8 -180.0 -109.9 40.0 128.0 73 -1.4 115 -1.7 0 0.0 116 -0.7 14 50
113 117 PRO P G T 4 > TS+ 0 0 -49.6 -38.3 -178.5 63.6 111.7 33.6 0 0.0 116 -0.8 0 0.0 0 0.0 8 38
114 118 ASP D G T 4 3 TS+ 0 0 -72.0 -7.2 177.9 44.9 101.7 58.8 0 0.0 0 0.0 0 0.0 0 0.0 7 32
115 119 VAL V G h > < TS+ 0 0 -109.0 -6.2 -177.7 91.8 89.3 59.3 112 -1.7 119 -2.2 0 0.0 0 0.0 13 43
116 120 MET M H H X < TS+ 0 0 -59.7 -33.7 179.0 61.4 74.6 42.7 113 -0.8 120 -3.2 112 -0.7 0 0.0 10 41
117 121 GLY G H H > TS+ 0 0 -59.8 -48.9 179.2 35.8 114.6 13.5 0 0.0 121 -1.7 0 0.0 0 0.0 7 29
118 122 ALA A H H > TS+ 0 0 -71.3 -36.1 -179.7 50.2 120.3 32.6 0 0.0 122 -2.4 0 0.0 0 0.0 9 35
119 123 VAL V H H X TS+ 0 0 -66.7 -55.1 -179.3 40.6 115.0 11.9 115 -2.2 123 -2.8 0 0.0 0 0.0 11 44
120 124 GLY G H H X TS+ 0 0 -64.1 -29.6 -179.2 48.7 119.2 34.6 116 -3.2 124 -0.8 0 0.0 0 0.0 9 37
121 125 SER S H H < TS+ 0 0 -79.3 -39.9 -178.3 30.4 121.5 25.7 117 -1.7 0 0.0 0 0.0 0 0.0 8 26
122 126 LYS K H H < TS+ 0 0 -93.0 -21.8 -177.3 27.1 133.8 41.8 118 -2.4 0 0.0 0 0.0 0 0.0 8 30
123 127 LEU L H H X >TS+ 0 0 -121.9 0.6 -179.4 97.9 86.1 64.6 119 -2.8 127 -2.7 0 0.0 128 -0.7 13 38
124 128 GLY G H H X 5TS+ 0 0 -59.1 -30.7 179.4 53.4 88.3 32.2 120 -0.8 128 -0.8 0 0.0 0 0.0 10 27
125 129 ARG R H H 4 5TS+ 0 0 -68.2 -49.0 -179.4 30.4 118.7 22.1 0 0.0 0 0.0 0 0.0 0 0.0 7 27
126 130 ILE I H H > 5TS+ 0 0 -77.1 -52.4 -178.2 33.4 130.1 23.2 0 0.0 130 -0.8 0 0.0 0 0.0 7 34
127 131 LEU L H H X >TS+ 0 0 -76.6 -36.3 -179.4 72.3 104.7 35.0 123 -2.7 132 -2.8 0 0.0 131 -0.7 10 44
128 132 GLY G H H < >>T - 0 0 -145.2 129.5 179.9 -127.3 33.0 172.9 0 0.0 138 -1.8 0 0.0 140 -1.5 8 41
136 140 PRO P T T 35TS+ 0 0 -44.5 -41.3 -179.8 38.4 109.3 37.1 0 0.0 0 0.0 0 0.0 0 0.0 8 32
137 141 LYS K T T 35TS+ 0 0 -95.4 1.5 175.0 62.8 106.7 63.9 0 0.0 0 0.0 0 0.0 0 0.0 5 34
138 142 ALA A T T <5TS- 0 0 -93.2 -3.5 179.5 -123.8 114.3 68.3 135 -1.8 0 0.0 0 0.0 0 0.0 8 41
139 143 GLY G T T 5TS+ 0 0 70.4 19.9 -178.2 115.5 81.0 51.2 0 0.0 0 0.0 0 0.0 0 0.0 10 46
140 144 THR T t > T + 0 0 -91.7 59.2 -176.8 154.6 62.9 112.4 0 0.0 148 -1.5 0 0.0 147 -0.5 6 37
145 149 ILE I H H > 3 T + 0 0 -62.5 -29.2 178.6 60.2 61.8 37.4 143 -1.3 149 -2.1 0 0.0 0 0.0 14 50
146 150 GLY G H H > 3 TS+ 0 0 -65.4 -40.1 179.7 49.5 105.7 22.4 0 0.0 150 -2.1 0 0.0 0 0.0 10 42
147 151 GLU E H H > < TS+ 0 0 -64.3 -42.7 179.8 53.1 108.1 24.6 144 -0.5 151 -1.8 0 0.0 0 0.0 8 37
148 152 ILE I H H X TS+ 0 0 -57.3 -51.4 -179.4 48.3 109.9 19.4 144 -1.5 152 -1.5 0 0.0 0 0.0 12 53
149 153 ILE I H H X TS+ 0 0 -56.9 -47.1 -179.9 51.8 109.4 25.4 145 -2.1 153 -2.2 0 0.0 0 0.0 14 52
150 154 ARG R H H X TS+ 0 0 -61.5 -34.9 179.3 56.7 105.6 31.3 146 -2.1 154 -1.6 0 0.0 0 0.0 10 43
151 155 GLU E H H < >TS+ 0 0 -62.0 -49.8 180.0 41.4 110.7 20.5 147 -1.8 156 -2.0 0 0.0 0 0.0 10 44
152 156 ILE I H H < >5TS+ 0 0 -64.6 -43.8 -179.9 54.5 112.7 26.8 148 -1.5 155 -1.9 0 0.0 65 -1.3 12 52
153 157 LYS K H H < 35TS+ 0 0 -60.1 -32.1 178.3 55.3 105.0 34.7 149 -2.2 0 0.0 0 0.0 0 0.0 11 44
154 158 ALA A T h < 35TS- 0 0 -77.9 -6.0 -179.4 -115.0 119.8 59.6 150 -1.6 0 0.0 0 0.0 0 0.0 9 31
155 159 GLY G T e <5TS+ 0 0 77.2 29.3 178.8 132.1 70.4 37.2 152 -1.9 60 -0.5 0 0.0 0 0.0 11 40
156 160 ARG R E E BC T - 0 0 -99.2 -177.6 -178.5 -87.0 36.0 119.4 166 -2.9 165 -1.8 0 0.0 0 0.0 8 31
163 167 LYS K T T 3 TS+ 0 0 -66.6 -15.1 179.8 60.1 124.3 49.7 0 0.0 0 0.0 0 0.0 0 0.0 7 26
164 168 THR T T T 3 TS- 0 0 -90.5 -2.3 -178.4 -107.3 118.4 61.0 0 0.0 0 0.0 0 0.0 0 0.0 6 24
165 169 GLY G S e < TS+ 0 0 85.9 13.0 178.8 123.5 82.3 50.1 162 -1.8 43 -2.2 0 0.0 0 0.0 12 36
166 170 ALA A E E AA - 42 0 -102.2 162.5 179.8 -173.2 38.1 133.5 0 0.0 162 -2.9 0 0.0 0 0.0 11 37
167 171 ILE I E E AA + 41 0 -151.0 154.3 177.9 162.2 8.7 164.9 41 -1.8 41 -2.4 0 0.0 0 0.0 12 49
168 172 HIS H E E AA - 40 0 -166.6 171.0 179.9 -170.8 13.4 170.8 0 0.0 0 0.0 0 0.0 0 0.0 11 58
169 173 ALA A E E AA - 39 0 -166.7 152.5 179.2 -101.0 33.7 167.8 39 -1.7 39 -2.2 0 0.0 0 0.0 8 55
170 174 PRO P E E AA + 38 0 -78.5 141.4 -179.9 178.9 31.5 127.7 0 0.0 0 0.0 0 0.0 0 0.0 8 67
171 175 VAL V E E A* - 0 0 -124.5 3.9 -179.1 -46.4 56.5 69.6 37 -3.2 0 0.0 0 0.0 0 0.0 13 64
172 176 GLY G E E AA - 37 0 161.0 -164.3 179.0 -75.3 62.9 172.0 37 -0.9 37 -2.5 0 0.0 0 0.0 11 56
173 177 LYS K E E AA > T - 36 0 -127.4 155.5 -177.0 -108.7 41.9 157.2 0 0.0 176 -2.1 0 0.0 0 0.0 9 53
174 178 ALA A T e 3 TS+ 0 0 -57.2 -24.9 -177.9 61.9 115.0 41.7 35 -3.0 0 0.0 0 0.0 0 0.0 12 48
175 179 CYS C T T 3 TS+ 0 0 -78.9 -13.0 -180.0 113.2 77.5 52.8 0 0.0 0 0.0 0 0.0 0 0.0 7 37
176 180 PHE F S t < TS- 0 0 -58.7 150.3 178.6 -98.8 82.8 103.5 173 -2.1 0 0.0 0 0.0 0 0.0 8 38
177 181 PRO P h > > T - 0 0 -68.6 137.9 -179.6 -115.7 37.9 120.5 0 0.0 181 -1.9 0 0.0 180 -1.2 6 32
178 182 PRO P H H > 3 TS+ 0 0 -50.4 -27.6 180.0 57.0 112.0 44.5 0 0.0 182 -2.4 0 0.0 0 0.0 10 36
179 183 GLU E H H > 3 TS+ 0 0 -74.7 -33.8 178.8 46.7 108.3 30.4 0 0.0 183 -2.3 0 0.0 0 0.0 8 32
180 184 LYS K H H > < TS+ 0 0 -72.2 -41.4 177.8 48.9 113.3 30.2 177 -1.2 184 -2.3 0 0.0 0 0.0 9 36
181 185 LEU L H H X TS+ 0 0 -61.2 -47.2 -179.5 49.6 111.8 18.7 177 -1.9 185 -2.4 0 0.0 0 0.0 12 50
182 186 ALA A H H X TS+ 0 0 -59.8 -41.5 178.7 51.3 109.8 24.7 178 -2.4 186 -2.2 0 0.0 0 0.0 11 47
183 187 ASP D H H X TS+ 0 0 -61.3 -46.3 179.2 47.5 111.2 24.6 179 -2.3 187 -1.9 0 0.0 0 0.0 10 41
184 188 ASN N H H X TS+ 0 0 -62.7 -41.7 178.1 52.1 110.1 27.5 180 -2.3 188 -2.1 0 0.0 0 0.0 13 55
185 189 ILE I H H X TS+ 0 0 -60.4 -47.2 178.1 46.9 111.1 20.3 181 -2.4 189 -2.0 0 0.0 0 0.0 11 64
186 190 ARG R H H X TS+ 0 0 -61.3 -38.8 179.9 55.6 109.5 29.9 182 -2.2 190 -2.5 0 0.0 0 0.0 10 48
187 191 ALA A H H X TS+ 0 0 -62.2 -42.5 178.4 47.9 107.7 26.6 183 -1.9 191 -2.1 0 0.0 0 0.0 12 48
188 192 PHE F H H X TS+ 0 0 -65.3 -41.8 179.7 49.4 112.0 26.4 184 -2.1 192 -2.5 0 0.0 0 0.0 11 57
189 193 ILE I H H X TS+ 0 0 -64.2 -44.9 177.8 49.6 110.8 21.0 185 -2.0 193 -2.5 0 0.0 0 0.0 9 56
190 194 ARG R H H X TS+ 0 0 -59.3 -43.3 179.9 47.2 113.4 23.2 186 -2.5 194 -1.4 0 0.0 0 0.0 8 38
191 195 ALA A H H < TS+ 0 0 -64.8 -43.6 -180.0 51.3 110.9 26.2 187 -2.1 0 0.0 0 0.0 0 0.0 10 43
192 196 LEU L H H < > TS+ 0 0 -62.0 -43.5 -179.8 49.6 109.3 22.8 188 -2.5 195 -1.4 0 0.0 0 0.0 9 54
193 197 GLU E H H < > TS+ 0 0 -66.8 -30.5 178.4 59.0 103.7 37.5 189 -2.5 196 -1.2 0 0.0 0 0.0 8 46
194 198 ALA A T h < 3 TS+ 0 0 -73.6 -8.8 179.0 55.3 104.3 58.9 190 -1.4 0 0.0 0 0.0 0 0.0 6 31
195 199 HIS H T T < TS+ 0 0 -110.4 17.7 178.1 136.6 71.3 85.7 192 -1.4 0 0.0 0 0.0 0 0.0 9 37
196 200 LYS K t < T - 0 0 -65.5 124.6 179.9 -112.9 61.8 122.0 193 -1.2 0 0.0 0 0.0 0 0.0 9 41
197 201 PRO P t > T - 0 0 -66.4 143.5 -179.6 -114.0 20.8 113.2 0 0.0 200 -1.8 0 0.0 0 0.0 9 31
198 202 GLU E T T 3 TS+ 0 0 -34.8 -67.1 -178.1 33.3 111.3 30.0 0 0.0 0 0.0 0 0.0 0 0.0 5 23
199 203 GLY G T T 3 TS+ 0 0 -81.5 3.1 178.7 128.2 80.7 69.8 0 0.0 0 0.0 0 0.0 0 0.0 6 23
200 204 ALA A t < T - 0 0 -59.9 128.3 -179.8 -157.0 47.3 116.3 197 -1.8 0 0.0 0 0.0 0 0.0 10 29
201 205 LYS K + 0 0 -111.6 150.6 179.8 9.7 45.8 151.8 0 0.0 0 0.0 0 0.0 0 0.0 7 22
202 206 GLY G S S S- 0 0 82.2 -170.4 -179.3 -7.8 113.1 108.1 0 0.0 0 0.0 0 0.0 0 0.0 5 18
203 207 THR T - 0 0 -65.2 124.5 -179.1 -165.5 54.8 116.0 0 0.0 0 0.0 0 0.0 0 0.0 7 28
204 208 PHE F S e S+ 0 0 -76.7 -57.2 178.2 42.8 82.1 14.7 0 0.0 44 -2.6 0 0.0 206 -1.1 11 37
205 209 LEU L E E AB + 43 0 -93.8 93.8 -179.1 173.2 67.3 141.8 0 0.0 0 0.0 0 0.0 0 0.0 9 45
206 210 ARG R E E A* - 0 0 -68.1 -44.0 176.9 -11.8 69.9 24.8 42 -2.0 0 0.0 204 -1.1 0 0.0 9 33
207 211 SER S E E AB - 42 0 -158.5 141.9 -177.7 -155.4 64.9 164.7 42 -0.9 42 -2.1 0 0.0 0 0.0 9 39
208 212 VAL V E E ABF - 41 220 -125.6 141.6 -178.7 -172.9 11.7 166.3 220 -0.5 220 -2.4 0 0.0 0 0.0 13 52
209 213 TYR Y E E ABF - 40 219 -133.9 153.6 175.4 -150.9 18.1 162.3 40 -3.1 40 -2.9 0 0.0 0 0.0 11 57
210 214 VAL V E E ABF + 39 218 -118.4 138.9 -178.4 163.6 32.4 161.0 218 -2.1 218 -2.3 0 0.0 0 0.0 14 64
211 215 THR T E E AB - 38 0 -153.4 162.7 176.4 -133.6 29.3 167.4 38 -2.4 38 -2.8 0 0.0 0 0.0 14 59
212 216 THR T t > T - 0 0 -106.8 -176.2 -180.0 -78.7 49.6 118.1 0 0.0 215 -0.7 0 0.0 0 0.0 15 49
213 217 THR T T T 3 TS- 0 0 -47.5 -66.2 178.6 -0.9 121.0 19.1 0 0.0 0 0.0 0 0.0 0 0.0 8 43
214 218 MET M T T 3 TS+ 0 0 -129.0 63.8 179.4 103.4 109.0 118.7 0 0.0 0 0.0 0 0.0 0 0.0 5 39
215 219 GLY G S t < TS- 0 0 -133.4 177.6 179.4 -77.0 74.4 138.9 212 -0.7 0 0.0 0 0.0 0 0.0 9 42
216 220 PRO P - 0 0 -71.1 157.4 179.2 -113.7 50.8 111.7 0 0.0 0 0.0 0 0.0 0 0.0 10 45
217 221 SER S - 0 0 -93.8 154.9 177.7 -147.3 19.0 133.3 0 0.0 0 0.0 0 0.0 0 0.0 8 49
218 222 VAL V E E AF - 210 0 -119.3 123.2 178.0 -135.9 14.7 167.7 210 -2.3 210 -2.1 0 0.0 0 0.0 13 48
219 223 ARG R E E AF - 209 0 -81.0 134.1 -178.4 -165.0 28.4 133.6 0 0.0 16 -3.1 0 0.0 0 0.0 12 46
220 224 ILE I E E AFa - 208 16 -124.6 158.6 178.3 -116.8 28.0 149.7 208 -2.4 208 -0.5 0 0.0 0 0.0 13 45
221 225 ASN N t > T - 0 0 -89.3 111.7 -179.3 -155.6 23.8 145.8 16 -2.8 224 -0.9 0 0.0 0 0.0 10 38
222 226 PRO P T T 3 TS+ 0 0 -62.0 -20.0 -177.6 59.2 89.1 47.7 0 0.0 0 0.0 0 0.0 0 0.0 9 43
223 227 HIS H T T 3 T 0 0 -106.5 38.9 178.9 999.9 999.9 100.6 0 0.0 0 0.0 0 0.0 0 0.0 3 35
224 228 SER S t < T 0 0 -125.6 999.9 999.9 999.9 999.9 110.9 221 -0.9 0 0.0 0 0.0 0 0.0 6 31
1ad2-.pdb
1AD2 RIBOSOMAL PROTEIN MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand TTTTTS TT B HHHHHHHHHTT SSS EEEEEEEESS TT GGG EEEEE SSS STTS EEEE THHHHHHHHTT SEEE GGGHHHHH Kabs/Sand
chirality ++++++++--++----+++++++++++++-------------+--++-+++-++-----++++-++-----+---++++++++-+-+-+--++++++++ chirality
bends SSSSSS SS SSSSSSSSSSS SSS SS SS SSS SSS SSSS SSSSSSSSSS SS SSSSSSSS bends
turns TTTTTTT TTTT TTTTTTTTTTTTT TTTTTTTT TTTT TTTTTTTTTTTTT TTTTTTTTT turns
5-turns >5555< >55 5-turns
3-turns >33< >33< >>><<< >33X>3<< >33< >>3<< >33< >>3X<3<>3 3-turns
bridge-2 BBBBBB eee bridge-2
bridge-1 a AAAAAAA CCCCC dddd eee bridge-1
sheets AAAAAAAA BBBBB CCCC CCC sheets
4-turns >4>4<4< >>>>XXX>>>XX<<<< >>>4<< 4-turns
summary tTTTTTt tTTt BhHHHHHHHHHhTt SSS eEEEEEEEEeStTTgGGGgeEEEEEeSSS tTTteEEEEethHHHHHHHHhTtSEEEgGGhHHHHH summary
sequence KRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKIL sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand TT SEEEE GGGHHHHHHHHHHHHHHHT S TTTT B S HHHHHHHHHTTEEEEE TTSEEEEEEEETTS HHHHHHHHHHHHHHHHTT TT Kabs/Sand
chirality -++++-+-++--+++++++++++++++++-++---++-+++-+++++++++++-+---+---+-+-+--+---++--++++++++++++++++++--++- chirality
bends SS S SSSSSSSSSSSSSSSSSSS S SSSS S SSSSSSSSSS SSS SSS SSSSSSSSSSSSSSSSSS SS bends
turns TTT TTTTTTTTTTTTTTTTTTTTT TTTTTT TTTTTTTTTTTTT TTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTT turns
5-turns 55< >555><555< >5555< >5555< 5-turns
3-turns 3< >>3<< >33< >33< >33< >33< >33< >33<>33< >>3<<>33< 3-turns
bridge-2 b bridge-2
bridge-1 dddd b CCCCC AAAAA*AA bridge-1
sheets CCCC BBBBB AAAAAAAA sheets
4-turns < >44>X>>XX<X<4<< >>>>XXX<<<< >>>>XXXXXXXXXX<<<< 4-turns
summary hTt SEEEEeTThHHHHHHHHHHHHHHHhtS tTTTTtB ShHHHHHHHHHheEEEEEetTTeEEEEEEEEeTthHHHHHHHHHHHHHHHHhTttTTt summary
sequence DGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGA sequence
110 120 130 140 150 160 170 180 190 200
author author
Kabs/Sand S SEEEEEEE TTS EEE TT Kabs/Sand
chirality +--++----+---+-------+ chirality
bends S S SSS S bends
turns TTTT TTTT turns
5-turns 5-turns
3-turns >33< >33< 3-turns
bridge-2 FFF a bridge-2
bridge-1 B*BBBBB FFF bridge-1
sheets AAAAAAA AAA sheets
4-turns 4-turns
summary S eEEEEEEEtTTt EEEtTTt summary
sequence KGTFLRSVYVTTTMGPSVRINPHS sequence
210 220