Secondary structure calculation program - copyright by David Keith Smith, 1989
1a76-.pdb
1A76 5'-3' EXO/ENDO NUCLEASE MOL_ID: 1; MOL_ID: 1;
Sequence length - 315
A A K K hydrogen bonding Ooi's
strk chain/ l amino u & S structure bridge dihedral angles donor acceptor donor acceptor N N
num seq.no t acids t S + patterns partners phi psi omega alpha kappa tco to/energy fr/energy to/energy fr/energy 8 14
1 2 GLY G 0 0 999.9 -157.3 179.8 999.9 999.9 999.9 0 0.0 0 0.0 0 0.0 0 0.0 7 45
2 3 VAL V - 0 0 -77.9 130.1 -178.8 -124.3 999.9 127.7 0 0.0 4 -2.5 0 0.0 0 0.0 10 46
3 4 GLN Q + 0 0 -73.5 62.3 180.0 137.5 61.2 109.7 0 0.0 0 0.0 0 0.0 0 0.0 7 41
4 5 PHE F g > > T + 0 0 -76.0 -30.7 -178.7 104.6 37.4 37.3 2 -2.5 7 -3.5 0 0.0 8 -0.8 8 51
5 6 GLY G G G 4 > TS+ 0 0 -12.1 -80.3 -178.8 37.5 80.9 49.9 0 0.0 8 -1.1 0 0.0 0 0.0 6 39
6 7 ASP D G G 4 3 TS+ 0 0 -61.9 -9.2 -176.6 51.3 120.2 56.9 0 0.0 0 0.0 0 0.0 0 0.0 5 27
7 8 PHE F G G 4 < TS+ 0 0 -112.4 -6.6 179.8 63.8 96.6 56.6 4 -3.5 0 0.0 0 0.0 0 0.0 6 37
8 9 ILE I S g < < TS- 0 0 -121.6 150.7 179.3 -102.3 83.1 152.4 5 -1.1 0 0.0 4 -0.8 0 0.0 8 46
9 10 PRO P + 0 0 -66.2 142.9 178.8 155.1 50.4 113.2 0 0.0 0 0.0 0 0.0 0 0.0 8 33
10 11 LYS K - 0 0 -160.2 161.5 -179.7 -145.2 25.3 165.6 0 0.0 0 0.0 0 0.0 0 0.0 9 37
11 12 ASN N E E AA - 196 0 -141.6 144.5 177.8 -116.4 20.1 175.8 196 -2.5 196 -3.3 0 0.0 0 0.0 7 32
12 13 ILE I E E AA - 195 0 -71.4 138.7 178.1 -166.0 35.3 121.0 0 0.0 0 0.0 0 0.0 0 0.0 8 28
13 14 ILE I e - 0 0 -129.0 140.4 179.5 -122.9 16.4 171.7 194 -2.2 0 0.0 0 0.0 0 0.0 10 32
14 15 SER S - 0 0 -78.8 159.6 178.3 -118.2 22.4 114.8 0 0.0 0 0.0 0 0.0 0 0.0 8 27
15 16 PHE F S g > TS+ 0 0 -62.4 -31.1 -179.6 60.3 115.0 32.3 0 0.0 18 -1.0 0 0.0 0 0.0 8 38
16 17 GLU E G G > TS+ 0 0 -63.6 -44.4 -178.9 51.3 99.6 24.5 0 0.0 19 -1.7 0 0.0 0 0.0 6 24
17 18 ASP D G G 3 TS+ 0 0 -73.7 -0.4 179.1 59.2 105.4 60.5 0 0.0 0 0.0 0 0.0 0 0.0 6 27
18 19 LEU L G G X TS+ 0 0 -101.3 -7.4 -179.2 124.3 80.2 63.4 15 -1.0 21 -1.6 0 0.0 0 0.0 10 40
19 20 LYS K T g < TS+ 0 0 -58.7 135.0 178.9 15.9 72.7 106.2 16 -1.7 0 0.0 0 0.0 0 0.0 9 30
20 21 GLY G T T 3 TS+ 0 0 83.1 1.6 -179.1 131.9 94.1 62.5 70 -0.6 0 0.0 71 -0.6 0 0.0 8 32
21 22 LYS K e < T - 0 0 -90.3 151.4 177.0 -137.1 51.5 124.2 18 -1.6 73 -2.0 0 0.0 0 0.0 10 42
22 23 LYS K E E Ab - 73 0 -100.7 141.7 179.5 -173.3 27.7 147.3 0 0.0 166 -2.5 0 0.0 167 -0.8 12 55
23 24 VAL V E E Abc - 74 167 -139.5 148.9 176.6 -138.2 26.0 172.5 73 -2.3 75 -1.9 0 0.0 25 -0.6 14 70
24 25 ALA A E E Abc - 75 168 -102.9 119.0 -179.6 -145.1 28.6 157.3 167 -2.6 169 -2.7 0 0.0 0 0.0 17 74
25 26 ILE I E E Abc - 76 169 -90.2 128.1 176.8 -128.7 12.8 138.6 75 -3.0 77 -2.5 23 -0.6 27 -1.4 13 75
26 27 ASP D E E >Ab T - 77 0 -72.2 97.5 -177.7 -162.5 30.0 127.7 169 -2.7 30 -2.3 0 0.0 0 0.0 15 70
27 28 GLY G H H > TS+ 0 0 -51.2 -55.1 -179.0 43.1 79.6 28.2 77 -2.4 31 -2.6 25 -1.4 0 0.0 11 70
28 29 MET M H H > TS+ 0 0 -65.2 -36.9 179.4 52.6 113.9 27.8 0 0.0 32 -2.3 0 0.0 0 0.0 9 60
29 30 ASN N H H > TS+ 0 0 -62.6 -41.7 -179.7 47.3 111.7 22.8 0 0.0 33 -1.9 0 0.0 0 0.0 10 62
30 31 ALA A H H X TS+ 0 0 -63.8 -46.6 179.8 50.7 111.0 24.3 26 -2.3 34 -2.3 0 0.0 0 0.0 12 63
31 32 LEU L H H X TS+ 0 0 -59.6 -45.5 179.1 47.4 110.6 27.1 27 -2.6 35 -2.0 0 0.0 0 0.0 12 61
32 33 TYR Y H H X TS+ 0 0 -63.3 -40.5 179.1 53.7 111.4 24.8 28 -2.3 36 -1.9 0 0.0 0 0.0 10 49
33 34 GLN Q H H X TS+ 0 0 -59.9 -44.5 179.4 47.9 108.4 26.0 29 -1.9 37 -2.1 0 0.0 0 0.0 10 47
34 35 PHE F H H X TS+ 0 0 -63.3 -41.2 -178.9 55.0 109.3 27.5 30 -2.3 38 -2.7 0 0.0 0 0.0 14 49
35 36 LEU L H H < TS+ 0 0 -62.6 -37.9 -179.3 38.6 114.3 31.6 31 -2.0 0 0.0 0 0.0 0 0.0 13 43
36 37 THR T H H < TS+ 0 0 -87.4 -24.4 -179.3 31.7 127.3 38.6 32 -1.9 0 0.0 0 0.0 0 0.0 8 36
37 38 SER S H H < TS+ 0 0 -105.9 -19.9 179.2 72.8 103.0 48.3 33 -2.1 39 -1.1 0 0.0 0 0.0 7 38
38 39 ILE I S h < TS+ 0 0 -98.2 91.1 -178.5 126.4 73.7 139.9 34 -2.7 46 -0.9 0 0.0 0 0.0 12 39
39 40 ARG R B B A - 45 0 -138.9 176.1 -180.0 -84.4 59.1 145.7 37 -1.1 0 0.0 0 0.0 0 0.0 12 31
40 41 LEU L t > T - 0 0 -73.9 178.3 -180.0 -87.3 55.9 95.6 44 -4.2 43 -2.0 0 0.0 0 0.0 8 24
41 42 ARG R T T 3 TS+ 0 0 -55.1 -38.1 -178.7 50.1 130.0 30.6 0 0.0 0 0.0 0 0.0 0 0.0 5 13
42 43 ASP D T T 3 TS- 0 0 -87.8 13.5 179.5 -101.2 123.7 77.0 0 0.0 0 0.0 0 0.0 0 0.0 5 13
43 44 GLY G S t < TS+ 0 0 77.7 12.6 179.2 140.0 78.6 49.9 40 -2.0 0 0.0 0 0.0 0 0.0 6 17
44 45 SER S - 0 0 -88.4 143.4 -179.7 -100.2 59.9 132.6 0 0.0 40 -4.2 0 0.0 0 0.0 7 21
45 46 PRO P B B A - 39 0 -60.5 156.3 177.7 -96.9 41.5 100.3 0 0.0 0 0.0 0 0.0 0 0.0 12 35
46 47 LEU L + 0 0 -72.2 135.8 179.1 177.5 53.1 125.0 38 -0.9 54 -2.4 0 0.0 55 -1.1 10 41
47 48 ARG R B B B - 53 0 -141.8 155.0 177.6 -126.5 25.6 168.4 0 0.0 0 0.0 0 0.0 0 0.0 11 37
48 49 ASN N t > T - 0 0 -87.4 -178.1 -177.9 -83.0 49.7 105.1 52 -2.3 51 -2.2 0 0.0 0 0.0 12 29
49 50 ARG R T T 3 TS+ 0 0 -65.4 -7.6 179.1 57.9 129.0 56.7 0 0.0 0 0.0 0 0.0 0 0.0 7 20
50 51 LYS K T T 3 TS- 0 0 -101.9 3.6 179.2 -108.8 119.5 71.8 0 0.0 0 0.0 0 0.0 0 0.0 5 18
51 52 GLY G S t < TS+ 0 0 81.4 9.3 179.7 142.5 71.6 55.4 48 -2.2 0 0.0 0 0.0 0 0.0 6 20
52 53 GLU E - 0 0 -85.3 140.4 -178.6 -106.4 58.2 129.9 0 0.0 48 -2.3 0 0.0 0 0.0 7 36
53 54 ILE I B B B + 47 0 -71.8 124.1 -178.5 172.0 38.5 120.4 0 0.0 0 0.0 0 0.0 0 0.0 10 47
54 55 THR T h > T + 0 0 -112.0 2.9 179.0 109.8 45.9 71.6 46 -2.4 58 -2.1 0 0.0 0 0.0 11 55
55 56 SER S H H > TS+ 0 0 -45.0 -47.8 -179.0 47.1 81.0 30.2 46 -1.1 59 -1.6 0 0.0 0 0.0 13 56
56 57 ALA A H H > TS+ 0 0 -66.9 -41.8 -179.9 52.3 108.8 28.6 0 0.0 60 -2.5 0 0.0 0 0.0 14 57
57 58 TYR Y H H > TS+ 0 0 -62.7 -37.8 179.4 54.7 107.6 27.7 0 0.0 61 -2.3 0 0.0 0 0.0 11 66
58 59 ASN N H H X TS+ 0 0 -62.1 -46.4 179.9 42.4 111.7 22.4 54 -2.1 62 -1.9 0 0.0 0 0.0 11 60
59 60 GLY G H H X >TS+ 0 0 -69.0 -40.9 -179.8 53.2 112.6 24.0 55 -1.6 63 -1.9 0 0.0 64 -0.7 13 59
60 61 VAL V H H X 5TS+ 0 0 -57.6 -49.3 -178.7 37.8 117.1 19.6 56 -2.5 64 -1.2 0 0.0 0 0.0 12 69
61 62 PHE F H H X 5TS+ 0 0 -66.4 -66.4 -178.4 31.3 126.6 6.6 57 -2.3 65 -1.9 0 0.0 0 0.0 11 72
62 63 TYR Y H H X 5TS+ 0 0 -64.9 -40.3 179.7 50.6 120.1 32.2 58 -1.9 66 -2.3 0 0.0 0 0.0 9 58
63 64 LYS K H H X 5TS+ 0 0 -66.2 -43.8 179.6 49.3 111.1 23.2 59 -1.9 67 -1.9 0 0.0 0 0.0 10 58
64 65 THR T H H X >TS+ 0 0 -66.3 -46.5 -179.4 50.1 111.3 23.4 63 -1.9 72 -2.3 0 0.0 70 -1.1 11 56
68 69 LEU L H H < >5TS+ 0 0 -66.0 -28.1 179.0 63.1 100.6 38.8 64 -2.1 71 -1.6 0 0.0 0 0.0 12 55
69 70 GLU E H H < 35TS+ 0 0 -67.6 -21.4 179.7 48.6 105.6 42.1 65 -2.1 0 0.0 0 0.0 0 0.0 8 38
70 71 ASN N T h < <5TS- 0 0 -106.3 27.7 -179.9 -105.1 123.7 91.0 67 -1.1 20 -0.6 66 -0.5 0 0.0 11 32
71 72 ASP D T T <5TS+ 0 0 54.4 29.6 176.8 141.7 75.1 40.2 68 -1.6 73 -0.7 0 0.0 20 -0.6 9 39
72 73 ILE I t > TS- 0 0 -90.8 -171.7 -179.7 -65.3 70.5 95.6 0 0.0 113 -1.3 0 0.0 112 -1.2 6 13
110 111 LYS K H H > 3 TS+ 0 0 -45.1 -39.2 179.7 47.9 138.1 37.2 0 0.0 114 -1.4 0 0.0 0 0.0 6 12
111 112 GLU E H H > 3 TS+ 0 0 -74.2 -28.4 -179.6 63.0 104.3 37.5 0 0.0 115 -1.6 0 0.0 0 0.0 7 13
112 113 ASP D H H 4 < TS+ 0 0 -65.2 -33.2 179.7 35.6 111.2 34.7 109 -1.2 0 0.0 0 0.0 0 0.0 9 17
113 114 PHE F H H X TS+ 0 0 -92.5 -23.5 177.6 56.9 113.1 46.0 109 -1.3 117 -1.0 0 0.0 0 0.0 9 15
114 115 GLU E H H < TS+ 0 0 -72.5 -24.9 179.2 47.7 110.3 38.7 110 -1.4 0 0.0 0 0.0 0 0.0 8 14
115 116 GLU E T h < TS+ 0 0 -87.0 -12.6 178.9 79.9 92.3 55.4 111 -1.6 0 0.0 0 0.0 0 0.0 8 15
116 117 ALA A T T 4 TS+ 0 0 -56.3 -51.4 178.9 36.2 102.5 13.7 0 0.0 0 0.0 0 0.0 0 0.0 7 16
117 118 ALA A S t X TS+ 0 0 -71.1 -18.8 -179.1 86.3 104.8 44.6 113 -1.0 119 -1.6 0 0.0 121 -0.7 8 17
118 119 LYS K T T 4 TS+ 0 0 -84.2 62.1 177.9 40.5 87.4 114.3 0 0.0 0 0.0 0 0.0 0 0.0 8 17
119 120 TYR Y T g > > TS+ 0 0 -159.4 -77.5 179.9 60.6 95.0 87.3 117 -1.6 122 -4.6 0 0.0 123 -0.5 8 17
120 121 ALA A G G 4 > TS+ 0 0 -32.9 -46.2 -179.9 63.0 101.4 36.2 0 0.0 123 -2.2 0 0.0 0 0.0 8 22
121 122 LYS K G G < > TS+ 0 0 -53.9 -30.4 -180.0 74.8 84.7 37.6 117 -0.7 124 -0.8 0 0.0 0 0.0 9 19
122 123 ARG R G G 4 < TS+ 0 0 -51.8 -34.4 179.3 72.4 80.0 30.7 119 -4.6 124 -1.1 0 0.0 0 0.0 6 17
123 124 VAL V G G < < TS- 0 0 -71.6 33.1 -179.8 -136.7 106.1 88.9 120 -2.2 0 0.0 119 -0.5 0 0.0 9 27
124 125 SER S g < T - 0 0 35.9 -168.3 178.4 -52.4 45.8 73.3 122 -1.1 0 0.0 121 -0.8 0 0.0 7 28
125 126 TYR Y S S S+ 0 0 -65.8 -23.3 179.1 85.6 126.5 41.5 0 0.0 127 -1.6 0 0.0 0 0.0 7 39
126 127 LEU L S S S+ 0 0 -81.2 88.9 -179.0 179.2 70.8 130.6 0 0.0 0 0.0 0 0.0 0 0.0 10 45
127 128 THR T h > T - 0 0 -91.5 159.5 179.3 -111.6 43.1 120.5 125 -1.6 131 -2.5 0 0.0 0 0.0 10 36
128 129 PRO P H H > TS+ 0 0 -55.6 -39.3 179.5 52.4 120.6 26.9 0 0.0 132 -2.6 0 0.0 0 0.0 8 33
129 130 LYS K H H > TS+ 0 0 -63.8 -40.5 179.5 47.9 109.5 28.5 0 0.0 133 -2.2 0 0.0 0 0.0 6 30
130 131 MET M H H > TS+ 0 0 -66.9 -39.5 178.3 49.7 112.5 27.4 0 0.0 134 -1.6 0 0.0 0 0.0 9 49
131 132 VAL V H H X TS+ 0 0 -64.7 -42.3 179.7 49.1 110.9 27.0 127 -2.5 135 -1.7 0 0.0 0 0.0 9 49
132 133 GLU E H H X TS+ 0 0 -65.0 -38.2 178.9 53.4 109.1 25.8 128 -2.6 136 -2.0 0 0.0 0 0.0 8 37
133 134 ASN N H H X TS+ 0 0 -63.9 -34.0 179.0 53.4 106.1 34.4 129 -2.2 137 -2.2 0 0.0 0 0.0 9 43
134 135 CYS C H H X TS+ 0 0 -69.2 -38.8 179.1 49.2 108.2 27.5 130 -1.6 138 -2.0 0 0.0 0 0.0 11 59
135 136 LYS K H H X TS+ 0 0 -66.4 -40.5 179.8 50.9 110.7 26.2 131 -1.7 139 -2.0 0 0.0 0 0.0 9 51
136 137 TYR Y H H X TS+ 0 0 -62.3 -44.3 -179.9 51.3 108.9 23.2 132 -2.0 140 -2.3 0 0.0 0 0.0 8 44
137 138 LEU L H H X TS+ 0 0 -60.6 -40.9 -179.6 51.3 108.6 25.9 133 -2.2 141 -2.1 0 0.0 0 0.0 13 57
138 139 LEU L H H X >TS+ 0 0 -64.7 -38.6 179.5 51.5 108.6 26.6 134 -2.0 143 -2.5 0 0.0 142 -0.5 13 62
139 140 SER S H H < >5TS+ 0 0 -63.6 -42.1 179.5 49.2 109.7 24.9 135 -2.0 142 -1.0 0 0.0 0 0.0 9 47
140 141 LEU L H H < 35TS+ 0 0 -64.2 -34.7 -179.4 52.4 110.2 29.6 136 -2.3 281 -2.8 0 0.0 0 0.0 12 44
141 142 MET M H H < 35TS- 0 0 -78.4 -7.9 179.8 -121.5 112.9 56.1 137 -2.1 0 0.0 0 0.0 0 0.0 14 56
142 143 GLY G T h < <5T + 0 0 75.6 15.8 -178.8 141.5 66.3 48.7 139 -1.0 278 -2.4 138 -0.5 0 0.0 11 48
143 144 ILE I t T - 0 0 -68.7 123.2 -179.9 -154.4 57.2 119.1 0 0.0 155 -1.7 0 0.0 0 0.0 11 63
152 153 GLY G H H > TS+ 0 0 -66.2 -34.8 179.9 58.5 94.6 31.8 0 0.0 156 -2.7 0 0.0 0 0.0 16 66
153 154 GLU E H H > TS+ 0 0 -64.0 -31.5 178.8 49.8 106.7 33.3 0 0.0 157 -1.7 0 0.0 0 0.0 13 67
154 155 ALA A H H > TS+ 0 0 -72.8 -41.1 179.5 48.0 110.8 27.7 0 0.0 158 -2.1 0 0.0 0 0.0 14 68
155 156 GLN Q H H X TS+ 0 0 -65.2 -42.2 -179.6 49.1 112.6 24.4 151 -1.7 159 -2.0 0 0.0 0 0.0 15 67
156 157 ALA A H H X TS+ 0 0 -64.9 -39.9 179.9 51.5 109.9 27.5 152 -2.7 160 -1.8 0 0.0 0 0.0 15 70
157 158 SER S H H X TS+ 0 0 -63.0 -45.5 179.3 51.5 108.5 20.6 153 -1.7 161 -3.2 0 0.0 0 0.0 17 65
158 159 TYR Y H H X TS+ 0 0 -57.5 -42.7 -180.0 51.0 108.7 26.8 154 -2.1 162 -2.4 0 0.0 0 0.0 12 57
159 160 MET M H H < >TS+ 0 0 -64.4 -35.3 180.0 45.8 113.2 30.0 155 -2.0 164 -1.9 0 0.0 165 -1.1 11 54
160 161 ALA A H H < >5TS+ 0 0 -73.8 -42.6 179.8 52.9 110.2 24.0 156 -1.8 163 -1.1 0 0.0 0 0.0 17 53
161 162 LYS K H H < 35TS+ 0 0 -58.8 -41.3 179.8 52.9 107.5 24.2 157 -3.2 0 0.0 0 0.0 0 0.0 10 41
162 163 LYS K T h < 35TS- 0 0 -69.0 -15.7 -179.5 -116.2 115.9 51.0 158 -2.4 0 0.0 0 0.0 0 0.0 7 30
163 164 GLY G T T <5TS+ 0 0 90.8 7.7 179.2 121.2 83.0 55.6 160 -1.1 0 0.0 0 0.0 0 0.0 7 29
164 165 ASP D S t TS+ 0 0 -95.5 -11.8 -178.9 100.6 75.9 55.2 0 0.0 176 -2.4 0 0.0 0 0.0 13 62
174 175 ASP D G G > > T + 0 0 -47.0 -29.8 179.4 73.8 63.3 46.8 0 0.0 177 -1.1 0 0.0 178 -0.6 9 67
175 176 ALA A G G 4 >>TS+ 0 0 -58.1 -27.8 -179.9 64.5 88.1 36.8 0 0.0 180 -2.2 0 0.0 178 -0.8 14 71
176 177 LEU L G G 4 X5TS+ 0 0 -62.6 -37.1 -179.8 60.1 93.7 29.2 173 -2.4 179 -1.8 0 0.0 0 0.0 12 70
177 178 LEU L G G 4 <5TS+ 0 0 -64.2 -23.9 178.9 54.0 101.1 42.3 174 -1.1 0 0.0 0 0.0 0 0.0 11 62
178 179 TYR Y G G < <5TS- 0 0 -93.0 10.0 179.3 -97.5 128.4 73.2 175 -0.8 0 0.0 174 -0.6 0 0.0 12 64
179 180 GLY G T g <5T + 0 0 87.2 11.1 178.4 167.6 62.3 50.6 176 -1.8 0 0.0 0 0.0 0 0.0 12 54
180 181 ALA A t A F T - 0 182 -103.5 116.9 -178.8 -150.9 9.8 156.8 0 0.0 202 -2.1 0 0.0 0 0.0 10 49
199 200 LEU L H H > TS+ 0 0 -52.3 -45.6 179.1 55.0 96.2 28.8 181 -2.2 203 -2.6 197 -0.6 0 0.0 11 48
200 201 ASN N H H > TS+ 0 0 -56.8 -41.8 179.5 48.5 109.3 25.8 0 0.0 204 -2.3 0 0.0 0 0.0 7 35
201 202 GLU E H H > TS+ 0 0 -65.1 -43.1 179.4 51.9 109.5 24.6 0 0.0 205 -2.6 0 0.0 0 0.0 9 31
202 203 VAL V H H X TS+ 0 0 -56.8 -52.4 -178.6 44.0 113.6 17.4 198 -2.1 206 -2.3 0 0.0 0 0.0 12 43
203 204 LEU L H H X >TS+ 0 0 -62.4 -44.0 -179.8 45.6 115.9 26.4 199 -2.6 208 -2.1 0 0.0 207 -1.1 12 36
204 205 GLU E H H < 5TS+ 0 0 -67.4 -44.1 179.8 47.3 115.1 23.7 200 -2.3 0 0.0 0 0.0 0 0.0 8 24
205 206 ASP D H H < 5TS+ 0 0 -64.8 -41.6 -179.8 37.0 120.3 27.6 201 -2.6 0 0.0 0 0.0 0 0.0 7 24
206 207 LEU L H H < 5TS- 0 0 -87.4 -11.0 179.3 -127.0 106.6 55.7 202 -2.3 0 0.0 0 0.0 0 0.0 7 36
207 208 ARG R T h < 5T + 0 0 66.5 45.4 -180.0 119.8 66.3 22.9 203 -1.1 0 0.0 0 0.0 0 0.0 6 29
208 209 ILE I t T - 0 0 -92.5 170.1 178.4 -106.8 35.4 117.2 0 0.0 213 -2.2 0 0.0 0 0.0 7 39
210 211 LEU L H H > TS+ 0 0 -63.5 -40.4 179.1 55.3 124.7 24.3 0 0.0 214 -2.3 0 0.0 0 0.0 9 46
211 212 ASP D H H > TS+ 0 0 -58.6 -40.1 178.0 49.3 107.6 26.3 0 0.0 215 -1.5 0 0.0 0 0.0 6 46
212 213 ASP D H H > TS+ 0 0 -64.3 -43.6 179.3 52.3 108.8 28.3 0 0.0 216 -2.3 0 0.0 0 0.0 9 53
213 214 LEU L H H X TS+ 0 0 -60.0 -41.0 178.7 52.5 107.4 25.8 209 -2.2 217 -2.5 0 0.0 0 0.0 11 64
214 215 ILE I H H X TS+ 0 0 -63.0 -37.5 179.2 52.3 107.5 29.3 210 -2.3 218 -2.6 0 0.0 0 0.0 11 64
215 216 ASP D H H X TS+ 0 0 -64.8 -45.9 178.7 49.7 108.3 18.8 211 -1.5 219 -2.7 0 0.0 0 0.0 13 67
216 217 ILE I H H X TS+ 0 0 -56.6 -44.5 179.0 50.5 111.8 21.3 212 -2.3 220 -2.4 0 0.0 0 0.0 12 66
217 218 ALA A H H X TS+ 0 0 -59.5 -45.0 -179.8 50.3 108.7 24.8 213 -2.5 221 -2.5 0 0.0 0 0.0 11 65
218 219 ILE I H H < TS+ 0 0 -61.7 -43.4 178.3 50.8 110.0 22.3 214 -2.6 0 0.0 0 0.0 0 0.0 12 61
219 220 PHE F H H < TS+ 0 0 -58.0 -46.6 -178.0 43.6 114.1 24.2 215 -2.7 229 -3.1 0 0.0 0 0.0 13 53
220 221 MET M H H < TS- 0 0 -70.1 -31.8 179.4 -99.4 127.5 32.5 216 -2.4 0 0.0 0 0.0 0 0.0 16 48
221 222 GLY G h < T - 0 0 115.0 121.7 178.8 -149.4 35.0 75.8 217 -2.5 0 0.0 0 0.0 0 0.0 13 44
222 223 THR T t > T - 0 0 -105.8 -175.9 178.6 -92.3 42.6 115.2 0 0.0 225 -0.9 0 0.0 0 0.0 12 50
223 224 ASP D T T 3 TS+ 0 0 -67.8 -20.3 -178.9 55.6 130.0 41.3 0 0.0 0 0.0 0 0.0 0 0.0 6 43
224 225 TYR Y T T 3 TS+ 0 0 -88.4 -11.9 177.9 24.5 120.3 56.3 0 0.0 0 0.0 0 0.0 0 0.0 6 48
225 226 ASN N S t X TS- 0 0 -151.6 68.5 -179.6 -159.6 82.7 116.0 222 -0.9 228 -2.1 0 0.0 0 0.0 9 41
226 227 PRO P T T 3 TS+ 0 0 -51.8 137.4 -179.9 26.5 78.7 100.6 0 0.0 0 0.0 0 0.0 0 0.0 7 30
227 228 GLY G T T > 3 TS- 0 0 90.3 -11.0 179.0 -146.4 96.7 71.1 0 0.0 231 -0.6 0 0.0 0 0.0 9 28
228 229 GLY G T T 4 < T - 0 0 50.9 -139.9 -178.3 -23.4 47.1 94.6 225 -2.1 230 -0.5 0 0.0 0 0.0 12 41
229 230 VAL V T T 4 > TS- 0 0 -117.2 125.0 177.2 -45.0 106.2 159.1 219 -3.1 232 -3.3 0 0.0 0 0.0 11 41
230 231 LYS K T T 4 3 TS- 0 0 28.8 42.8 179.2 -63.9 104.8 49.8 228 -0.5 0 0.0 0 0.0 0 0.0 5 29
231 232 GLY G T T < 3 TS+ 0 0 67.8 7.3 -179.8 162.3 87.0 56.3 227 -0.6 0 0.0 0 0.0 0 0.0 7 27
232 233 ILE I t < T - 0 0 -63.7 128.4 179.0 -156.5 21.8 113.8 229 -3.3 0 0.0 0 0.0 0 0.0 10 32
233 234 GLY G h > T - 0 0 -93.7 -170.9 -178.7 -82.5 34.8 102.1 0 0.0 237 -2.2 0 0.0 0 0.0 8 34
234 235 PHE F H H > TS+ 0 0 -60.4 -47.3 -179.2 51.1 124.5 23.0 0 0.0 238 -2.9 0 0.0 0 0.0 12 40
235 236 LYS K H H > TS+ 0 0 -57.4 -49.7 -179.3 41.9 114.4 24.5 0 0.0 239 -1.7 0 0.0 0 0.0 6 35
236 237 ARG R H H > TS+ 0 0 -67.9 -38.0 -179.8 49.3 116.2 28.6 0 0.0 240 -1.9 0 0.0 0 0.0 8 35
237 238 ALA A H H X TS+ 0 0 -67.7 -42.0 179.2 49.0 110.9 25.2 233 -2.2 241 -2.2 0 0.0 0 0.0 14 47
238 239 TYR Y H H X TS+ 0 0 -65.2 -34.0 179.5 55.6 109.0 31.4 234 -2.9 242 -2.7 0 0.0 0 0.0 9 46
239 240 GLU E H H X TS+ 0 0 -65.1 -42.8 -179.9 45.0 109.2 25.1 235 -1.7 243 -1.1 0 0.0 0 0.0 8 33
240 241 LEU L H H < >TS+ 0 0 -70.2 -35.8 178.8 52.4 112.8 31.4 236 -1.9 245 -1.8 0 0.0 246 -1.0 10 38
241 242 VAL V H H < >5TS+ 0 0 -65.5 -49.3 -179.5 47.6 109.0 17.6 237 -2.2 244 -1.3 0 0.0 0 0.0 13 36
242 243 ARG R H H < 35TS+ 0 0 -64.1 -24.3 179.9 57.7 108.5 38.6 238 -2.7 0 0.0 0 0.0 0 0.0 8 30
243 244 SER S T h < 35TS- 0 0 -79.9 -15.8 179.3 -122.8 110.8 49.3 239 -1.1 0 0.0 0 0.0 0 0.0 7 23
244 245 GLY G T T <5TS+ 0 0 82.4 22.3 179.8 95.3 88.8 43.6 241 -1.3 0 0.0 0 0.0 0 0.0 7 23
245 246 VAL V h > TS+ 0 0 -56.9 -48.8 -179.1 52.2 81.4 24.6 240 -1.0 250 -2.5 0 0.0 0 0.0 11 42
247 248 LYS K H H > TS+ 0 0 -58.2 -44.3 178.9 47.6 109.5 27.5 0 0.0 251 -2.1 0 0.0 0 0.0 9 39
248 249 ASP D H H > TS+ 0 0 -63.2 -42.6 -179.7 50.9 113.2 21.9 0 0.0 252 -1.6 0 0.0 0 0.0 7 28
249 250 VAL V H H X TS+ 0 0 -60.9 -43.3 -179.3 47.8 110.4 27.4 245 -2.0 253 -3.0 0 0.0 0 0.0 8 35
250 251 LEU L H H X TS+ 0 0 -68.6 -37.7 178.5 56.3 106.3 31.3 246 -2.5 254 -3.0 0 0.0 0 0.0 12 46
251 252 LYS K H H < TS+ 0 0 -61.1 -38.8 178.8 39.5 115.8 25.5 247 -2.1 0 0.0 0 0.0 0 0.0 11 31
252 253 LYS K H H < TS+ 0 0 -74.5 -47.7 -177.1 36.8 124.3 22.7 248 -1.6 0 0.0 0 0.0 0 0.0 7 23
253 254 GLU E H H < TS+ 0 0 -81.8 -23.3 -177.4 54.5 113.5 44.0 249 -3.0 255 -0.6 0 0.0 0 0.0 7 34
254 255 VAL V S h < > TS- 0 0 -122.4 107.2 178.4 -147.6 70.2 154.0 250 -3.0 257 -1.3 0 0.0 0 0.0 9 36
255 256 GLU E T T 3 TS+ 0 0 -64.0 143.4 -179.9 20.0 91.9 114.3 253 -0.6 0 0.0 0 0.0 0 0.0 6 30
256 257 TYR Y T h > 3 TS+ 0 0 65.0 26.9 177.9 148.5 78.6 38.0 0 0.0 260 -2.4 0 0.0 0 0.0 7 35
257 258 TYR Y H H > < TS+ 0 0 -56.5 -43.5 -179.6 49.0 73.2 24.9 254 -1.3 261 -2.0 0 0.0 0 0.0 9 43
258 259 ASP D H H > TS+ 0 0 -67.0 -33.4 179.9 52.4 109.4 34.7 0 0.0 262 -1.8 0 0.0 0 0.0 7 37
259 260 GLU E H H > TS+ 0 0 -69.4 -42.6 -179.6 49.7 108.2 25.3 0 0.0 263 -1.3 0 0.0 0 0.0 7 37
260 261 ILE I H H X TS+ 0 0 -62.5 -44.5 178.9 52.4 109.5 23.1 256 -2.4 264 -1.2 0 0.0 0 0.0 9 53
261 262 LYS K H H X > TS+ 0 0 -56.7 -46.0 -179.4 53.7 106.2 24.4 257 -2.0 265 -2.5 0 0.0 264 -0.5 9 51
262 263 ARG R H H X 3 TS+ 0 0 -61.9 -28.8 178.4 62.4 99.9 37.3 258 -1.8 266 -2.7 0 0.0 0 0.0 10 44
263 264 ILE I H H < 3 TS+ 0 0 -62.8 -41.0 -179.4 35.2 113.1 25.6 259 -1.3 0 0.0 0 0.0 0 0.0 11 49
264 265 PHE F H H < < TS+ 0 0 -81.9 -36.2 -178.5 39.0 125.8 32.4 260 -1.2 0 0.0 261 -0.5 0 0.0 11 55
265 266 LYS K H H < TS+ 0 0 -84.6 -30.3 -177.7 29.4 128.0 37.7 261 -2.5 0 0.0 0 0.0 0 0.0 8 43
266 267 GLU E S h < TS+ 0 0 -128.6 57.9 -179.9 163.2 77.7 116.1 262 -2.7 0 0.0 0 0.0 0 0.0 8 41
267 268 PRO P - 0 0 -77.9 159.9 177.6 -104.5 46.0 113.1 0 0.0 0 0.0 0 0.0 0 0.0 12 45
268 269 LYS K + 0 0 -80.5 125.6 -179.3 165.2 54.3 135.4 0 0.0 0 0.0 0 0.0 0 0.0 13 43
269 270 VAL V - 0 0 -133.2 179.4 -179.4 -140.0 23.7 138.1 0 0.0 0 0.0 0 0.0 0 0.0 12 45
270 271 THR T - 0 0 -147.4 152.0 179.2 -160.7 17.4 173.2 0 0.0 0 0.0 0 0.0 0 0.0 8 40
271 272 ASP D + 0 0 -107.3 -5.0 -179.4 108.5 66.1 65.0 0 0.0 273 -1.6 0 0.0 0 0.0 4 33
272 273 ASN N + 0 0 -79.1 84.3 178.8 88.4 56.0 123.0 0 0.0 0 0.0 0 0.0 0 0.0 4 27
273 274 TYR Y - 0 0 -163.4 171.4 179.2 -135.6 58.7 163.9 271 -1.6 0 0.0 0 0.0 0 0.0 7 38
274 275 SER S - 0 0 -141.4 143.7 -179.9 -156.4 9.1 175.3 0 0.0 0 0.0 0 0.0 0 0.0 6 35
275 276 LEU L + 0 0 -96.1 -0.4 -179.3 124.7 58.5 65.9 0 0.0 0 0.0 0 0.0 0 0.0 7 46
276 277 SER S - 0 0 -64.7 138.6 178.0 -142.6 52.9 109.0 0 0.0 0 0.0 0 0.0 0 0.0 6 37
277 278 LEU L - 0 0 -100.7 150.3 179.7 -157.2 12.5 138.7 0 0.0 0 0.0 0 0.0 0 0.0 9 41
278 279 LYS K - 0 0 -124.4 158.6 179.8 -87.5 31.7 150.8 142 -2.4 0 0.0 0 0.0 0 0.0 8 38
279 280 LEU L - 0 0 -66.0 141.1 -179.8 -108.1 52.2 112.6 0 0.0 0 0.0 0 0.0 0 0.0 9 34
280 281 PRO P - 0 0 -74.0 143.3 178.3 -125.0 15.7 115.9 0 0.0 282 -1.5 0 0.0 0 0.0 10 45
281 282 ASP D h > T - 0 0 -86.2 89.5 -178.4 -172.0 29.8 136.0 140 -2.8 285 -2.1 0 0.0 0 0.0 9 36
282 283 LYS K H H > TS+ 0 0 -51.2 -45.0 -178.6 49.0 79.3 30.7 280 -1.5 286 -1.9 0 0.0 0 0.0 12 40
283 284 GLU E H H > TS+ 0 0 -65.3 -45.5 180.0 48.9 110.6 26.2 0 0.0 287 -2.3 0 0.0 0 0.0 6 34
284 285 GLY G H H > TS+ 0 0 -64.5 -36.6 179.3 51.8 110.3 31.1 0 0.0 288 -2.5 0 0.0 0 0.0 8 37
285 286 ILE I H H X TS+ 0 0 -66.3 -43.6 178.9 49.3 109.8 22.3 281 -2.1 289 -3.2 0 0.0 0 0.0 13 49
286 287 ILE I H H X >TS+ 0 0 -60.1 -45.9 -179.7 47.1 113.1 22.3 282 -1.9 291 -2.0 0 0.0 290 -1.8 12 38
287 288 LYS K H H < >TS+ 0 0 -63.2 -46.0 -179.0 41.2 117.8 22.1 283 -2.3 292 -3.1 0 0.0 0 0.0 9 33
288 289 PHE F H H < 5TS+ 0 0 -66.9 -53.7 -178.4 29.8 127.9 13.0 284 -2.5 0 0.0 0 0.0 0 0.0 10 45
289 290 LEU L H H < 5TS+ 0 0 -72.5 -54.8 -178.7 23.1 134.4 17.8 285 -3.2 295 -2.5 0 0.0 0 0.0 12 50
290 291 VAL V T h X 5TS+ 0 0 -79.6 -60.0 -178.6 36.4 129.8 14.0 286 -1.8 294 -1.2 0 0.0 0 0.0 13 38
291 292 ASP D T T 4 T - 0 0 -70.6 124.0 -178.2 -145.4 35.2 124.6 0 0.0 300 -2.4 0 0.0 0 0.0 7 29
297 298 TYR Y H H > TS+ 0 0 -55.4 -55.2 -179.2 50.7 94.5 20.3 0 0.0 301 -3.4 0 0.0 0 0.0 8 27
298 299 ASP D H H > TS+ 0 0 -49.7 -53.0 -179.2 46.0 112.9 23.2 0 0.0 302 -2.6 0 0.0 0 0.0 6 22
299 300 ARG R H H > TS+ 0 0 -60.0 -45.7 -179.9 45.9 115.4 23.7 0 0.0 303 -2.0 0 0.0 0 0.0 8 30
300 301 VAL V H H X TS+ 0 0 -64.4 -47.7 179.8 51.4 111.8 16.8 296 -2.4 304 -3.0 0 0.0 0 0.0 12 42
301 302 LYS K H H X TS+ 0 0 -52.8 -50.5 -179.6 48.9 110.7 20.3 297 -3.4 305 -1.9 0 0.0 0 0.0 10 33
302 303 LYS K H H X TS+ 0 0 -57.9 -41.4 -178.9 45.4 114.8 26.8 298 -2.6 306 -1.6 0 0.0 0 0.0 8 29
303 304 HIS H H H X TS+ 0 0 -74.9 -36.6 179.3 51.6 109.0 29.1 299 -2.0 307 -3.0 0 0.0 0 0.0 10 46
304 305 VAL V H H X TS+ 0 0 -68.5 -29.8 178.5 51.3 111.1 33.1 300 -3.0 308 -2.2 0 0.0 0 0.0 11 50
305 306 ASP D H H X TS+ 0 0 -70.7 -39.6 179.0 44.6 112.9 25.8 301 -1.9 309 -1.8 0 0.0 0 0.0 9 36
306 307 LYS K H H X TS+ 0 0 -70.4 -39.4 179.9 52.0 112.6 26.3 302 -1.6 310 -2.1 0 0.0 0 0.0 8 39
307 308 LEU L H H X TS+ 0 0 -62.5 -44.4 179.5 51.6 108.3 22.1 303 -3.0 311 -2.3 0 0.0 0 0.0 12 49
308 309 TYR Y H H X TS+ 0 0 -57.1 -49.2 -178.8 45.8 111.7 20.9 304 -2.2 312 -3.0 0 0.0 0 0.0 11 41
309 310 ASN N H H X TS+ 0 0 -65.7 -35.6 178.6 54.2 110.2 31.0 305 -1.8 313 -2.9 0 0.0 0 0.0 8 29
310 311 LEU L H H X TS+ 0 0 -63.3 -49.9 179.9 39.3 115.0 16.9 306 -2.1 314 -3.7 0 0.0 0 0.0 10 38
311 312 ILE I H H X TS+ 0 0 -66.7 -40.8 179.2 52.9 115.6 22.9 307 -2.3 315 -3.7 0 0.0 0 0.0 11 41
312 313 ALA A H H < TS+ 0 0 -58.2 -46.3 -179.9 36.8 118.3 20.9 308 -3.0 0 0.0 0 0.0 0 0.0 8 27
313 314 ASN N H H < TS+ 0 0 -74.0 -40.6 178.7 51.0 116.9 28.1 309 -2.9 0 0.0 0 0.0 0 0.0 6 25
314 315 LYS K H H < T 0 0 -58.6 -53.0 179.7 999.9 999.9 12.4 310 -3.7 0 0.0 0 0.0 0 0.0 5 31
315 316 THR T h < T 0 0 -77.4 999.9 999.9 999.9 999.9 57.7 311 -3.7 0 0.0 0 0.0 0 0.0 5 25
1a76-.pdb
1A76 5'-3' EXO/ENDO NUCLEASE MOL_ID: 1; MOL_ID: 1;
author author
Kabs/Sand GGGS EE SGGGTT EEEEEHHHHHHHHHHHSB TTS B B TTS B HHHHHHHHHHHHHHHTT EEEEEE SS SS SS SSS SS Kabs/Sand
chirality -+++++-+-----++++++------++++++++++++--+-+--+--+-+-+++++++++++++++++-+---------+-+++--++++--+--++-+ chirality
bends SSSS SSSSSS SSSSSSSSSSSS SSS SSS SSSSSSSSSSSSSSSSS SS SS SS SSS SS bends
turns TTTTT TTTTTTT TTTTTTTTTTTTT TTTT TTTT TTTTTTTTTTTTTTTTTTT turns
5-turns >5555< >5555< 5-turns
3-turns >>3<< >>3X<3< >33< >33< >>3<< 3-turns
bridge-2 ccc ddd bridge-2
bridge-1 AA bbbbb A A B B bbbbb bridge-1
sheets AA AAAAA AAAAAA sheets
4-turns >444< >>>>XXXXX<<<< >>>>XXXXXXXXX<<<< 4-turns
summary gGGGg EEe gGGGgTeEEEEEHHHHHHHHHHHhBtTTt B BtTTt BhHHHHHHHHHHHHHHHhTtEEEEEE SS SS SS SSS SS summary
sequence GVQFGDFIPKNIISFEDLKGKKVAIDGMNALYQFLTSIRLRDGSPLRNRKGEITSAYNGVFYKTIHLLENDITPIWVFDGEPPKLKEKTRKVRREMKEKA sequence
10 20 30 40 50 60 70 80 90 100
author author
Kabs/Sand S SHHHHHTTSTTGGGG SS HHHHHHHHHHHHHHT EEE SS HHHHHHHHHHTTSSSEEE SSSGGGGGT SEEEESSSS SS EEEEHH Kabs/Sand
chirality +--+-+++-+++++++++++++--++-+++++++++++++-+-------+-++++++++++-++----+-+-+++++-+-+---++++-++-------++ chirality
bends S SSSSSSSSSSSSSSS SS SSSSSSSSSSSSSS SS SSSSSSSSSSSSSSS SSS SSSS S SSSS SS SS bends
turns TTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTT TTTTTTTTTTTTTT TTTTTTTT TTT turns
5-turns >5555< >5555< >5555< 5-turns
3-turns >33< >>><<< >33< >33< >>>X<<< 3-turns
bridge-2 ee FFFF FFFF bridge-2
bridge-1 ddd ccc ee AA bridge-1
sheets AAA AAA AAAA AAAA sheets
4-turns >>>4X<<4X4>4<4< >>>>XXXXXXXX<<<< >>>>XXXX<<<< >444< >>> 4-turns
summary S hHHHHHhTtTgGGGGgSShHHHHHHHHHHHHHHhteEEEeSShHHHHHHHHHHhTtSSEEEeSSgGGGGGgteEEEESSSS SS eEEEEHH summary
sequence ELKMKEAIKKEDFEEAAKYAKRVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRNLTTTKEMPELIELN sequence
110 120 130 140 150 160 170 180 190 200
author author
Kabs/Sand HHHHHHT HHHHHHHHHHH TTSTTTTTT HHHHHHHHHTT HHHHHHHHSTTHHHHHHHHHS HHHHHHHHTTTT HHHH Kabs/Sand
chirality +++++-+--++++++++++---++-+----+--+++++++++-++++++++++-++++++++++++-+--++--+------+++++++++++-+--++++ chirality
bends SSSSSS SSSSSSSSSSS SSSSS SSS SSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSS SSSS bends
turns TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTT TTTTT turns
5-turns >5555< >5555< >>555<< 5-turns
3-turns >33X33<>33< >33< >33< >33< 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns >XX<<<< >>>>XXXXX<<<< >444< >>>>XXX<<<< >>>>XX<<<< >>>>XXX<<<< >>>>XX<<>>>X 4-turns
summary HHHHHHhthHHHHHHHHHHHhtTTtTTTTTTthHHHHHHHHHhThHHHHHHHHhThHHHHHHHHHh hHHHHHHHHhTTTt hHHHH summary
sequence EVLEDLRISLDDLIDIAIFMGTDYNPGGVKGIGFKRAYELVRSGVAKDVLKKEVEYYDEIKRIFKEPKVTDNYSLSLKLPDKEGIIKFLVDENDFNYDRV sequence
210 220 230 240 250 260 270 280 290 300
author author
Kabs/Sand HHHHHHHHHHHHHH Kabs/Sand
chirality +++++++++++++ chirality
bends SSSSSSSSSSSSS bends
turns TTTTTTTTTTTTTTT turns
5-turns 5-turns
3-turns 3-turns
bridge-2 bridge-2
bridge-1 bridge-1
sheets sheets
4-turns XXXXXXXXXXX<<<< 4-turns
summary HHHHHHHHHHHHHHh summary
sequence KKHVDKLYNLIANKT sequence
310