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STIFDB - Entry Name : AT3G62980 | Stress Signals involved in |
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STIFDB Provides Data in 2 levels:
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Gene Description : AT3G62980
| Locus Identifier | Gene Model Name | Gene Model Description | Gene Model Type | | AT3G62980 | AT3G62980.1 | Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. | |
Gene Ontology Data from
TAIR
: AT3G62980
| GO Category |
GO Annotation Type |
GO ID |
GO Evidence Type |
References |
| Biological Process | response to molecule of bacterial origin | GO:0002237 |
IEP | Publication:501718864|PMID:16627744 |
| Biological Process | ubiquitin-dependent protein catabolic process | GO:0006511 |
TAS | Publication:501683127|PMID:11019805 |
| Biological Process | lateral root formation | GO:0010311 |
IMP | Publication:2777|PMID:9436980 |
| Cellular Compartment | ubiquitin ligase complex | GO:0000151 |
IDA | Publication:1367|PMID:10398681 |
| Biological Process | response to auxin stimulus | GO:0009733 |
IMP | Publication:2777|PMID:9436980 |
| Molecular Function | protein binding | GO:0005515 |
IPI | Publication:1367|PMID:10398681 |
| Molecular Function | auxin binding | GO:0010011 |
IGI | Publication:501719531|PMID:15917797 |
| Molecular Function | protein binding | GO:0005515 |
IPI | Publication:501719532|PMID:15917798 |
| Molecular Function | ubiquitin-protein ligase activity | GO:0004842 |
IC | Publication:1367|PMID:10398681 |
| Molecular Function | ubiquitin-protein ligase activity | GO:0004842 |
ISS | Communication:501714663 |
| Cellular Compartment | SCF ubiquitin ligase complex | GO:0019005 |
IDA | Publication:1367|PMID:10398681 |
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Biological Process |
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Molecular Function |
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Cellular Compartment |
Click here for
Guide to GO Evidence Codes
Orthologs
| Gene Id | Sorghum bicolor | Zea mays | Glycine Max
| | AT3G62980 | Sb09g003870 | GRMZM2G135978 | GLYMA19G39420 |
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