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STIFDB - Entry Name : AT1G48410

Stress Signals involved in

 COLD 

STIFDB Provides Data in 2 levels:
1000bp Data
100bp Data

Gene Description : AT1G48410

Locus IdentifierGene Model NameGene Model DescriptionGene Model Type
AT1G48410AGO1Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development.

Gene Ontology Data from TAIR : AT1G48410

GO Category GO Annotation Type GO ID GO Evidence Type References
Molecular FunctionmiRNA bindingGO:0035198 IPIPublication:501717588|PMID:16081530
Biological Processposttranscriptional gene silencingGO:0016441 IEPPublication:1547361|PMID:11910010
Cellular CompartmentnucleusGO:0005634 IDAPublication:501721376|PMID:17442570
Biological Processauxin metabolic processGO:0009850 IGIPublication:501715169|PMID:15829601
Biological Processresponse to far red lightGO:0010218 IGIPublication:501715169|PMID:15829601
Molecular FunctionsiRNA bindingGO:0035197 IPIPublication:501717588|PMID:16081530
Cellular CompartmentcytoplasmGO:0005737 IDAPublication:501721376|PMID:17442570
Biological Processgene silencing by miRNAGO:0035195 IGIPublication:501712501|PMID:15131082
Biological Processgene silencing by miRNAGO:0035195 IMPPublication:501712501|PMID:15131082
Cellular CompartmentcytoplasmGO:0005737 TASPublication:2795|PMID:9427751
Biological Processresponse to auxin stimulusGO:0009733 IGIPublication:501715169|PMID:15829601
Molecular Functionendoribonuclease activityGO:0004521 IDAPublication:501717588|PMID:16081530
Biological Processleaf morphogenesisGO:0009965 IMPPublication:2795|PMID:9427751
Biological Processembryonic development ending in seed dormancyGO:0009793 IGIPublication:1897|PMID:9876176
Molecular Functionprotein bindingGO:0005515 IPIPublication:501723164|PMID:17869109
Biological Processvirus induced gene silencingGO:0009616 IDAPublication:501720606|PMID:17158744
Biological Processadventitious root developmentGO:0048830 IMPPublication:501715169|PMID:15829601
Biological ProcessRNA interferenceGO:0016246 IMPPublication:501722556|PMID:17558406
Biological Processgene silencing by miRNAGO:0035195 IEPPublication:501712501|PMID:15131082
    Biological Process     Molecular Function     Cellular Compartment

Click here for Guide to GO Evidence Codes


Orthologs

Gene IdSorghum bicolorZea maysGlycine Max
AT1G48410Sb06g025560GRMZM2G039455GLYMA16G34300
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012