7MDH

structural basis for light acitvation of a chloroplast enzyme. the structure of sorghum nadp-malate dehydrogenase in its oxidized form

• Total interactions analyzed: 6
• Total true interactions: 4
• Strongest Interaction:
  • Chains: A-B
  • Int. Res.: 195
  • Norm. En. per Res.: -4.9402
• Hub Node: B(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-79.0393	-199.3356	-684.959	-963.3339	195	23	14	24795	13	62	39
B-C	-10.124	-1.6972	-96.4554	-108.2766	62	7	0	3553	6	17	27
B-D	0.0	8.8256	7.0153	15.8409	12	7	0	455	0	2	1
C-D	-71.2888	-198.5155	-678.699	-948.5033	200	34	14	25175	14	64	38

Interface residues

• A-B: ALA205A, ALA205B, ALA210A, ALA210B, ALA213A, ALA213B, ALA271A, ALA271B, ALA281A, ALA281B, ALA282A, ALA282B, ALA285A, ALA285B, ALA289A, ALA289B, ALA54A, ALA54B, ALA55A, ALA55B, ALA67A, ALA67B, ALA91A, ALA91B, ALA96A, ALA96B, ARG108A, ARG108B, ARG199A, ARG199B, ARG204A, ARG204B, ARG268A, ARG268B, ARG278A, ARG278B, ASN203A, ASN203B, ASN60A, ASN60B, ASP101A, ASP101B, ASP201A, ASP201B, ASP218A, ASP218B, ASP290A, ASP290B, CYS207A, CYS207B, CYS29A, CYS29B, GLN208A, GLN208B, GLN274A, GLN274B, GLN74A, GLN74B, GLN90A, GLN90B, GLU100A, GLU100B, GLU109A, GLU109B, GLU202A, GLU202B, GLU70A, GLU70B, GLU93A, GLU93B, GLU98A, GLU98B, GLY214A, GLY214B, GLY269A, GLY269B, GLY26A, GLY26B, GLY270A, GLY270B, GLY277A, GLY277B, GLY56A, GLY56B, GLY69A, GLY69B, GLY94A, GLY94B, HIS61A, HIS61B, ILE112A, ILE112B, ILE273A, ILE273B, ILE58A, ILE58B, LEU103A, LEU103B, LEU106A, LEU106B, LEU107A, LEU107B, LEU200A, LEU200B, LEU209A, LEU209B, LEU211A, LEU211B, LEU272A, LEU272B, LEU34B, LEU62A, LEU62B, LEU63A, LEU63B, LEU92A, LEU92B, LEU99A, LEU99B, LYS206A, LYS206B, LYS212A, LYS212B, LYS219A, LYS219B, LYS267A, LYS267B, LYS275A, LYS275B, LYS293A, LYS293B, LYS65A, LYS65B, MET57A, MET57B, MET97A, MET97B, PHE216A, PHE216B, PHE25A, PHE25B, PHE28A, PHE28B, PHE64A, PHE64B, PHE89A, PHE89B, PRO105A, PRO105B, SER102A, SER102B, SER221A, SER279A, SER279B, SER280A, SER280B, SER283A, SER283B, SER287A, SER287B, SER59A, SER59B, SER68A, SER68B, SER88A, SER88B, THR284A, THR284B, THR30A, THR30B, THR31B, TRP276A, TRP276B, TRP43A, TRP43B, TYR104A, TYR104B, TYR217A, TYR217B, TYR32B, VAL110A, VAL110B, VAL215A, VAL215B, VAL220A, VAL220B, VAL223A, VAL223B, VAL265B, VAL27A, VAL27B, VAL286A, VAL286B, VAL95A, VAL95B
• B-C: ALA141B, ALA142B, ALA152B, ALA157C, ALA160C, ALA367B, ALA375B, ALA91C, ARG87B, ARG87C, ASN147B, ASN374B, ASP115B, ASP115C, ASP145B, ASP153B, ASP153C, ASP23C, CYS29C, GLN149B, GLN154C, GLN90C, GLU118C, GLU121C, GLU139B, GLU86B, GLU86C, GLU93C, GLY113C, GLY135B, GLY137B, GLY373B, GLY84B, GLY94C, HIS368B, ILE112C, ILE114B, ILE114C, ILE146B, ILE150B, LEU143B, LEU369B, LEU83C, LYS132B, LYS156B, LYS156C, MET138B, MET97C, PHE120C, PHE25C, PHE89B, PHE89C, PRO116B, PRO116C, SER85B, SER85C, SER88B, SER88C, TYR117B, TYR117C, VAL119C, VAL161C
• B-D: ALA271D, ALA375B, ASN374B, GLN149B, GLN274D, GLY371B, GLY373B, HIS368B, ILE273D, LEU369B, LYS156B, LYS275D
• C-D: ALA205C, ALA205D, ALA210C, ALA210D, ALA213C, ALA213D, ALA271C, ALA271D, ALA281C, ALA281D, ALA282C, ALA282D, ALA285C, ALA285D, ALA289C, ALA289D, ALA54C, ALA54D, ALA55C, ALA55D, ALA67C, ALA67D, ALA91C, ALA91D, ALA96C, ALA96D, ARG108C, ARG108D, ARG199C, ARG199D, ARG204C, ARG204D, ARG268C, ARG268D, ARG278C, ARG278D, ASN203C, ASN203D, ASN60C, ASN60D, ASP101C, ASP101D, ASP201C, ASP201D, ASP218C, ASP218D, ASP290C, ASP290D, CYS207C, CYS207D, CYS29C, CYS29D, GLN208C, GLN208D, GLN274C, GLN274D, GLN74C, GLN74D, GLN90C, GLN90D, GLU100C, GLU100D, GLU109C, GLU109D, GLU202C, GLU202D, GLU70C, GLU70D, GLU93C, GLU93D, GLU98C, GLU98D, GLY214C, GLY214D, GLY269C, GLY269D, GLY26C, GLY26D, GLY270C, GLY270D, GLY277C, GLY277D, GLY53C, GLY53D, GLY56C, GLY56D, GLY69C, GLY69D, GLY94C, GLY94D, HIS61C, HIS61D, ILE112C, ILE112D, ILE273C, ILE273D, ILE58C, ILE58D, ILE78C, LEU103C, LEU103D, LEU106C, LEU106D, LEU107C, LEU107D, LEU200C, LEU200D, LEU209C, LEU209D, LEU211C, LEU211D, LEU272C, LEU272D, LEU62C, LEU62D, LEU63C, LEU63D, LEU92C, LEU92D, LEU99C, LEU99D, LYS206C, LYS206D, LYS212C, LYS212D, LYS219C, LYS219D, LYS267C, LYS267D, LYS275C, LYS275D, LYS293C, LYS293D, LYS65C, LYS65D, MET57C, MET57D, MET97C, MET97D, PHE216C, PHE216D, PHE25C, PHE25D, PHE28C, PHE28D, PHE64C, PHE64D, PHE89C, PHE89D, PRO105C, PRO105D, SER102C, SER102D, SER221C, SER221D, SER279C, SER279D, SER280C, SER280D, SER283C, SER283D, SER287C, SER287D, SER59C, SER59D, SER68C, SER68D, SER88C, SER88D, THR264D, THR284C, THR284D, THR30C, THR30D, THR31C, THR31D, TRP276C, TRP276D, TRP43C, TRP43D, TYR104C, TYR104D, TYR217C, TYR217D, TYR32D, VAL110C, VAL110D, VAL215C, VAL215D, VAL220C, VAL220D, VAL223C, VAL223D, VAL265D, VAL27C, VAL27D, VAL286C, VAL286D, VAL95C, VAL95D