3ZZQ

engineered 12-subunit bacillus subtilis trp rna-binding attenuation protein (trap)

• Total interactions analyzed: 15
• Total true interactions: 9
• Strongest Interaction:
  • Chains: B-C
  • Int. Res.: 86
  • Norm. En. per Res.: -5.2374
• Hub Node: A(2)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-106.4399	-49.3696	-278.352	-434.1615	86	11	10	10743	2	27	29
A-C	0.0	0.0	-0.3283	-0.3283	2	0	0	38	0	0	0
B-C	-119.2212	-57.3053	-273.887	-450.4134	86	16	10	10461	2	26	30
B-D	0.0	0.0	-0.3262	-0.3262	2	0	0	37	0	0	0
C-D	-106.0647	-41.6637	-276.942	-424.6704	88	12	9	10804	1	27	30
C-E	0.0	0.0	-0.2998	-0.2998	2	0	0	36	0	0	0
D-E	-108.3964	-46.6456	-277.948	-432.99	85	13	10	10662	2	27	29
D-F	0.0	0.0	-0.3233	-0.3233	2	0	0	38	0	0	0
E-F	-103.5317	-57.6746	-299.351	-460.5573	89	17	10	11306	3	26	30

Interface residues

• A-B: ALA14B, ALA46A, ALA46B, ALA54A, ALA61A, ALA61B, ALA66A, ALA66B, ARG26A, ARG58A, ASN20A, ASP29A, ASP39B, ASP8A, ASP8B, GLN47A, GLN47B, GLN64A, GLN64B, GLU36B, GLU42B, GLU50B, GLU60A, GLU69A, GLU69B, GLY23B, GLY27A, GLY41B, GLY59A, GLY68A, GLY68B, HIS33B, HIS34B, HIS51B, ILE12A, ILE12B, ILE22A, ILE44B, ILE45B, ILE55A, ILE55B, ILE63A, ILE63B, LEU24A, LEU38B, LEU62A, LEU62B, LYS13B, LYS31A, LYS37B, LYS40B, LYS56A, LYS71A, LYS71B, MET70A, MET70B, PHE32A, PHE48A, PHE48B, PHE9A, PHE9B, SER35B, SER53A, SER7A, SER7B, THR25A, THR25B, THR28A, THR30A, THR49A, THR49B, THR52A, THR52B, THR65A, THR65B, TYR67A, TYR67B, VAL10A, VAL10B, VAL11A, VAL11B, VAL19A, VAL21A, VAL21B, VAL43B, VAL57A
• A-C: PHE9C, TYR67A
• B-C: ALA14C, ALA46C, ALA54B, ALA61B, ALA61C, ALA66B, ALA66C, ARG26B, ARG58B, ASN20B, ASP29B, ASP39C, ASP8B, ASP8C, GLN47B, GLN47C, GLN64B, GLN64C, GLU36C, GLU42C, GLU50C, GLU60B, GLU69B, GLU69C, GLY23C, GLY27B, GLY41C, GLY59B, GLY68B, GLY68C, HIS33C, HIS34C, HIS51C, ILE12B, ILE12C, ILE22B, ILE44C, ILE45C, ILE55B, ILE55C, ILE63B, ILE63C, LEU24B, LEU38C, LEU62B, LEU62C, LYS13C, LYS31B, LYS37C, LYS40C, LYS56B, LYS71B, MET70B, MET70C, PHE32B, PHE48B, PHE48C, PHE9B, PHE9C, SER35C, SER53B, SER7B, SER7C, THR25B, THR25C, THR28B, THR30B, THR49B, THR49C, THR52B, THR52C, THR65B, THR65C, TYR67B, TYR67C, VAL10B, VAL10C, VAL11C, VAL15B, VAL15C, VAL19B, VAL19C, VAL21B, VAL21C, VAL43C, VAL57B
• B-D: PHE9D, TYR67B
• C-D: ALA14D, ALA46C, ALA46D, ALA54C, ALA61C, ALA61D, ALA66C, ALA66D, ARG26C, ARG58C, ASN20C, ASP29C, ASP39D, ASP8C, ASP8D, GLN47C, GLN47D, GLN64C, GLN64D, GLU36D, GLU42D, GLU50D, GLU60C, GLU69C, GLU69D, GLY23D, GLY27C, GLY41D, GLY59C, GLY68C, GLY68D, HIS33D, HIS34D, HIS51D, ILE12C, ILE12D, ILE22C, ILE44D, ILE45D, ILE55C, ILE55D, ILE63C, ILE63D, LEU24C, LEU38D, LEU62C, LEU62D, LYS13D, LYS31C, LYS37D, LYS40D, LYS56C, LYS71C, LYS71D, MET70C, MET70D, PHE32C, PHE48C, PHE48D, PHE9C, PHE9D, SER35D, SER53C, SER7C, SER7D, THR25C, THR25D, THR28C, THR30C, THR49C, THR49D, THR52C, THR52D, THR65C, THR65D, TYR67C, TYR67D, VAL10C, VAL10D, VAL11C, VAL11D, VAL15C, VAL19C, VAL19D, VAL21C, VAL21D, VAL43D, VAL57C
• C-E: PHE9E, TYR67C
• D-E: ALA14E, ALA46D, ALA46E, ALA54D, ALA61D, ALA61E, ALA66D, ALA66E, ARG26D, ARG58D, ASN20D, ASP29D, ASP39E, ASP8D, ASP8E, GLN47D, GLN47E, GLN64D, GLN64E, GLU36E, GLU42E, GLU50E, GLU60D, GLU69D, GLU69E, GLY23E, GLY27D, GLY41E, GLY59D, GLY68D, GLY68E, HIS33E, HIS34E, HIS51E, ILE12D, ILE12E, ILE22D, ILE44E, ILE45E, ILE55D, ILE55E, ILE63D, ILE63E, LEU24D, LEU38E, LEU62D, LEU62E, LYS13E, LYS31D, LYS37E, LYS40E, LYS56D, LYS71D, LYS71E, MET70D, MET70E, PHE32D, PHE48D, PHE48E, PHE9D, PHE9E, SER35E, SER53D, SER7D, SER7E, THR25D, THR25E, THR28D, THR30D, THR49D, THR49E, THR52D, THR52E, THR65D, THR65E, TYR67D, TYR67E, VAL10D, VAL10E, VAL11D, VAL11E, VAL21D, VAL21E, VAL43E, VAL57D
• D-F: PHE9F, TYR67D
• E-F: ALA14F, ALA46E, ALA46F, ALA54E, ALA61E, ALA61F, ALA66E, ALA66F, ARG26E, ARG58E, ASN20E, ASP29E, ASP39F, ASP8E, ASP8F, GLN47E, GLN47F, GLN64E, GLN64F, GLU36F, GLU42F, GLU50F, GLU60E, GLU69E, GLU69F, GLY23F, GLY27E, GLY41F, GLY59E, GLY68E, GLY68F, HIS33F, HIS34F, HIS51E, HIS51F, ILE12E, ILE12F, ILE22E, ILE44F, ILE45F, ILE55E, ILE55F, ILE63E, ILE63F, LEU24E, LEU38F, LEU62E, LEU62F, LYS13F, LYS31E, LYS37F, LYS40F, LYS56E, LYS71E, LYS71F, MET70E, MET70F, PHE32E, PHE48E, PHE48F, PHE9E, PHE9F, SER35F, SER53E, SER7E, SER7F, THR25E, THR25F, THR28E, THR30E, THR49E, THR49F, THR52E, THR52F, THR65E, THR65F, TYR67E, TYR67F, VAL10E, VAL10F, VAL11E, VAL11F, VAL15E, VAL19E, VAL19F, VAL21E, VAL21F, VAL43F, VAL57E