3ZVO
crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3
Total interactions analyzed 276
Total true interactions 26
Strongest Interaction Chains J-N
Int. Res. 56
Norm. En. per Res. -4.3894
Hub Node C(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C 0.0 0.0 -0.0598 -0.0598 5 0 0 30 0 2 3
B-E 0.0 0.0 -0.475 -0.475 7 0 0 113 0 0 2
B-H -5.2687 -27.0503 -66.6468 -98.9658 33 14 0 2888 0 17 19
C-D 0.0 0.0 -1.4955 -1.4955 5 2 0 174 0 0 4
C-E 0.0 -12.8145 -4.922 -17.7365 15 0 0 494 0 4 5
C-J 0.0 14.1188 -58.495 -44.3762 54 1 2 2903 0 12 25
C-N -7.3934 5.6622 -186.407 -188.1382 81 11 3 8730 0 18 37
D-E 0.0 5.9212 -38.4538 -32.5326 50 4 0 2799 1 7 12
E-H -11.9475 -38.4713 -112.238 -162.6568 60 20 2 5995 2 38 41
F-O 0.0 0.0 -0.4255 -0.4255 4 0 0 76 0 6 2
F-R -31.0999 -30.2725 -225.1 -286.4724 84 33 8 9793 3 15 22
G-I 0.0 2.5654 -7.1618 -4.5964 37 8 5 1974 0 5 7
G-K 0.0 0.0 -48.3907 -48.3907 25 3 3 2097 0 1 7
G-U 0.0 0.0 -0.1428 -0.1428 2 0 0 30 0 1 0
H-L 0.0 0.0 -1.841 -1.841 6 0 0 188 0 0 1
H-Q -3.467 5.2371 -20.4389 -18.6688 15 1 0 1237 0 2 7
I-J 0.0 -0.9022 -10.4338 -11.336 19 11 0 1049 0 6 14
I-N 0.0 0.0 -11.6733 -11.6733 7 0 0 383 0 0 0
J-N -18.4187 -23.1946 -204.195 -245.8083 56 40 7 8909 5 15 35
K-R -10.3146 -12.3746 -53.3752 -76.0644 31 3 2 2740 0 14 18
L-Q 0.0 0.0 -31.409 -31.409 20 1 4 1756 0 0 7
L-Y -17.6914 -15.6753 -40.2406 -73.6072 46 28 0 2680 1 23 23
M-S -3.6884 5.4356 -50.622 -48.8748 37 1 3 2964 0 10 16
M-U 0.0 0.9992 -3.2964 -2.2972 12 0 0 433 0 3 11
N-S 0.0 0.0 -0.1783 -0.1783 4 0 0 49 0 1 2
O-Q 0.0 -2.6578 -1.6563 -4.314 14 0 0 255 0 12 8