3ZQO
crystal structure of the small terminase oligomerization core domain from a spp1-like bacteriophage (crystal form 3)
Total interactions analyzed 153
Total true interactions 38
Strongest Interaction Chains E-F
Int. Res. 99
Norm. En. per Res. -3.8304
Hub Node E(5)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -81.971 -21.1276 -253.466 -356.5646 98 17 11 11504 3 48 49
A-H 0.0 0.0 -0.0012 -0.0012 6 0 0 4 0 2 3
A-I -88.8343 -14.4156 -274.507 -377.7569 101 19 11 11856 4 48 52
B-C -80.775 -11.649 -276.115 -368.539 98 14 11 12033 2 47 48
B-I 0.0 0.0 -0.0076 -0.0076 6 0 0 10 0 2 3
C-D -79.8714 -35.0764 -260.242 -375.1898 100 17 11 11544 3 49 50
C-E 0.0 0.0 -0.0007 -0.0007 2 0 0 2 0 2 3
D-E -55.7924 -32.7675 -246.364 -334.924 98 16 12 11072 2 45 47
D-F 0.0 0.0 -0.0008 -0.0008 2 0 0 2 0 2 3
D-M 0.0 0.0 -0.1996 -0.1996 6 0 0 57 0 0 2
D-N 0.0 -3.2306 -14.0579 -17.2885 22 0 2 1030 0 9 7
D-O 0.0 0.0 -0.3302 -0.3302 12 0 0 130 0 3 4
E-F -74.6591 -46.2517 -258.299 -379.2098 99 20 12 11565 4 48 47
E-G 0.0 0.0 -0.0371 -0.0371 2 0 0 19 0 2 3
E-M 0.0 -4.2576 -13.1288 -17.3864 26 1 2 847 0 9 7
E-N -13.2193 2.0234 -46.9866 -58.1824 25 3 3 2217 0 8 10
E-O 0.0 0.0 -0.1554 -0.1554 4 0 0 42 0 3 3
F-G -83.1668 -15.2637 -263.982 -362.4125 99 13 10 11282 2 50 47
F-H 0.0 0.0 -0.0007 -0.0007 3 0 0 2 0 2 3
F-M 0.0 0.0 -0.2615 -0.2615 10 0 0 108 0 2 4
F-N 0.0 0.0 -0.3815 -0.3815 2 0 0 56 0 1 4
G-H -73.8879 -18.4073 -252.745 -345.0402 99 15 11 11522 3 50 50
G-I 0.0 0.0 -0.0037 -0.0037 2 0 0 7 0 2 3
H-I -77.7395 1.8682 -274.802 -350.6733 100 25 11 11948 3 50 49
J-K -74.408 -24.7079 -267.847 -366.9629 99 15 11 12049 4 46 47
J-L 0.0 0.0 -0.0006 -0.0006 2 0 0 2 0 2 3
J-R -73.1128 -13.4535 -269.526 -356.0923 101 17 11 11712 2 50 49
K-L -73.5474 -32.0646 -253.942 -359.554 97 13 11 11218 4 46 47
K-M 0.0 0.0 -0.01 -0.01 4 0 0 10 0 2 3
K-R 0.0 0.0 -0.002 -0.002 3 0 0 3 0 2 3
L-M -51.9329 -28.8754 -271.872 -352.6803 100 21 11 11817 4 48 48
M-N -65.9724 -39.0513 -246.865 -351.8887 99 24 11 11540 4 47 49
N-O -65.9636 -49.0852 -261.624 -376.6728 100 23 11 11983 3 48 50
O-P -63.0389 -1.2885 -252.112 -316.4394 100 18 11 11631 3 49 50
O-Q 0.0 0.0 -0.0003 -0.0003 2 0 0 1 0 2 3
P-Q -52.7195 -21.5503 -274.139 -348.4088 100 23 12 11965 2 50 49
P-R 0.0 0.0 -0.0155 -0.0155 2 0 0 12 0 2 3
Q-R -67.147 -12.815 -263.982 -343.9439 97 17 11 11800 2 46 48