3ZQN
crystal structure of the small terminase oligomerization core domain from a spp1-like bacteriophage (crystal form 2)
Total interactions analyzed 45
Total true interactions 22
Strongest Interaction Chains E-F
Int. Res. 113
Norm. En. per Res. -3.5713
Hub Node A(4)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
A-B -88.5065 -23.6565 -281.962 -394.125 115 14 16 12994 3 53 60
A-C -2.3752 2.0412 -14.8183 -15.1523 9 0 0 442 0 4 4
A-I 0.0 2.0102 -11.8609 -9.8507 13 0 0 431 0 4 4
A-J -112.9239 -26.4996 -226.255 -365.6785 118 19 16 13079 3 53 59
B-C -86.3145 -27.6451 -263.639 -377.5986 112 19 16 12859 2 53 59
B-D -3.2329 1.7621 -12.7045 -14.1752 10 0 0 407 0 4 4
B-J -2.2044 2.257 -12.7283 -12.6757 11 0 0 430 0 4 4
C-D -84.6954 -26.3646 -279.564 -390.624 113 13 16 12863 2 52 58
C-E 0.0 1.703 -10.6835 -8.9805 12 0 0 390 0 4 4
D-E -77.8055 -30.8331 -280.686 -389.3246 111 14 16 12896 3 54 58
D-F -2.4369 1.6426 -10.7665 -11.5608 10 0 0 374 0 4 4
D-G 0.0 0.0 -0.0069 -0.0069 2 0 0 5 0 1 1
E-F -89.1711 -34.9846 -279.399 -403.5548 113 16 16 12714 3 52 59
E-G 0.0 2.532 -21.1401 -18.608 11 2 0 609 0 4 4
F-G -84.0229 -17.5062 -271.202 -372.7311 113 19 16 13054 3 53 59
F-H -2.4787 2.0626 -14.4052 -14.8213 9 0 0 434 0 4 4
F-I 0.0 0.0 -0.079 -0.079 2 0 0 29 0 0 1
G-H -75.2287 -21.5298 -281.594 -378.3525 113 14 16 12966 3 53 59
G-I -2.7689 1.5189 -19.1687 -20.4187 12 1 0 599 0 4 4
H-I -76.7124 -22.996 -296.684 -396.3924 115 17 16 13184 3 54 57
H-J -2.2171 2.1752 -14.6391 -14.681 12 0 0 458 0 4 4
I-J -82.0023 -24.6837 -281.006 -387.692 112 13 16 12918 2 53 60