3VHM

crystal structure of npc-biotin-avidin complex

• Total interactions analyzed: 6
• Total true interactions: 6
• Strongest Interaction:
  • Chains: C-D
  • Int. Res.: 161
  • Norm. En. per Res.: -4.8183
• Hub Node: A(3)

All Interactions

Chains	Hydro. Bond Ener. (kJ/mol)	Elec. Ener. (kJ/mol)	VDW. Ener. (kJ/mol)	Tot. Stab. Ener. (kJ/mol)	#int. res.	# Short cont.	#Hydr. int.	#VDW pairs	#salt bridges	#Pot. fav. elec. int	#Pot. unfav. elec. int
A-B	-49.5894	-84.4474	-603.866	-737.9028	160	18	6	22764	8	31	28
A-C	-28.6307	33.034	-129.754	-125.3507	58	4	1	5477	0	4	11
A-D	0.0	0.0	-34.1265	-34.1265	25	2	2	1453	0	3	4
B-C	0.0	0.0	-33.4112	-33.4112	25	2	2	1414	0	3	4
B-D	-39.1876	24.563	-134.151	-148.7756	57	3	1	5612	0	4	11
C-D	-59.5592	-99.5303	-616.659	-775.7485	161	19	6	23177	8	32	26

Interface residues

• A-B: ALA112A, ALA112B, ARG100A, ARG100B, ARG114A, ARG114B, ARG26A, ARG26B, ARG59A, ARG59B, ARG87A, ARG87B, ASN104A, ASN104B, ASN42A, ASN42B, ASN54A, ASN54B, ASN57A, ASN57B, ASN69A, ASN69B, ASN88A, ASP105A, ASP105B, ASP108A, ASP108B, ASP109A, ASP109B, ASP86A, ASP86B, CYS4A, CYS83A, CYS83B, GLN53A, GLN53B, GLN61A, GLN61B, GLN82A, GLN82B, GLU28A, GLU28B, GLU74A, GLU74B, GLU91A, GLU91B, GLY107A, GLY107B, GLY116A, GLY116B, GLY27A, GLY27B, GLY31A, GLY51A, GLY51B, GLY65A, GLY65B, GLY81A, GLY81B, GLY89A, HIS50A, HIS50B, ILE106A, ILE106B, ILE117A, ILE117B, ILE119A, ILE119B, ILE56A, ILE56B, ILE85A, ILE85B, LEU49A, LEU49B, LEU93A, LEU93B, LEU98A, LEU98B, LEU99A, LEU99B, LYS111B, LYS45A, LYS45B, LYS58A, LYS58B, LYS71A, LYS71B, LYS90A, LYS94A, LYS94B, MET96A, MET96B, PHE29A, PHE29B, PHE64A, PHE64B, PHE66A, PHE66B, PHE72A, PHE72B, PHE79A, PHE79B, PHE84A, PHE84B, PRO48A, PRO48B, PRO62A, PRO62B, SER101A, SER101B, SER102A, SER102B, SER25A, SER25B, SER47A, SER47B, SER73A, SER73B, SER75A, SER75B, THR113A, THR113B, THR30A, THR30B, THR32A, THR40A, THR40B, THR52A, THR52B, THR55A, THR55B, THR60A, THR63A, THR63B, THR67A, THR67B, THR76A, THR76B, THR77A, THR77B, THR80A, THR80B, THR95A, THR95B, TRP110A, TRP110B, TRP70A, TRP70B, TRP97A, TRP97B, VAL103A, VAL103B, VAL115A, VAL115B, VAL68A, VAL68B, VAL78A, VAL78B, VAL92A, VAL92B
• A-C: ALA112A, ALA112C, ALA36C, ALA39A, ALA39C, ARG114A, ARG114C, ASN118A, ASN118C, ASN12A, ASN12C, ASP108A, ASP108C, ASP109A, ASP109C, GLY107A, GLY107C, GLY116A, GLY116C, ILE117A, ILE117C, ILE44C, LEU14A, LEU14C, LEU98A, LEU98C, LEU99A, LEU99C, LYS111A, LYS111C, MET96A, MET96C, PHE72A, PHE72C, SER101A, SER101C, THR113A, THR113C, THR35A, THR35C, THR38A, THR38C, THR40A, THR40C, THR77A, THR77C, TRP110A, TRP110C, TRP70A, TRP70C, TRP97A, TRP97C, VAL103A, VAL103C, VAL115A, VAL115C, VAL37A, VAL37C
• A-D: ARG114A, ARG114D, ARG87A, ASN118A, ASN118D, ASP13D, GLY116A, GLY116D, ILE117A, ILE117D, ILE119A, ILE119D, LEU14D, LEU98A, LEU98D, LYS94A, LYS94D, MET96A, MET96D, THR95A, THR95D, TRP97A, TRP97D, VAL115A, VAL115D
• B-C: ARG114B, ARG114C, ARG87C, ASN118B, ASN118C, GLY116B, GLY116C, ILE117B, ILE117C, ILE119B, ILE119C, LEU14B, LEU98B, LEU98C, LYS94B, LYS94C, MET96B, MET96C, THR95B, THR95C, TRP97B, TRP97C, VAL115B, VAL115C, VAL37B
• B-D: ALA112B, ALA112D, ALA36B, ALA39B, ALA39D, ARG114B, ARG114D, ASN118B, ASN118D, ASP108B, ASP108D, ASP109B, ASP109D, GLY107B, GLY107D, GLY116B, GLY116D, ILE117B, ILE117D, ILE44B, ILE44D, LEU14B, LEU14D, LEU98B, LEU98D, LEU99B, LEU99D, LYS111B, LYS111D, MET96B, MET96D, PHE72B, PHE72D, SER101B, SER101D, THR113B, THR113D, THR35B, THR35D, THR38B, THR38D, THR40B, THR40D, THR77B, THR77D, TRP110B, TRP110D, TRP70B, TRP70D, TRP97B, TRP97D, VAL103B, VAL103D, VAL115B, VAL115D, VAL37B, VAL37D
• C-D: ALA112C, ALA112D, ARG100C, ARG100D, ARG114C, ARG114D, ARG26C, ARG26D, ARG59C, ARG59D, ARG87C, ARG87D, ASN104C, ASN104D, ASN42C, ASN42D, ASN54C, ASN54D, ASN57C, ASN57D, ASN69C, ASN69D, ASN88C, ASP105C, ASP105D, ASP108C, ASP108D, ASP109C, ASP109D, ASP86C, ASP86D, CYS4D, CYS83C, CYS83D, GLN53C, GLN53D, GLN61C, GLN61D, GLN82C, GLN82D, GLU28C, GLU28D, GLU46C, GLU46D, GLU74C, GLU74D, GLU91C, GLU91D, GLY107C, GLY107D, GLY116C, GLY116D, GLY27C, GLY27D, GLY31C, GLY31D, GLY51C, GLY51D, GLY65C, GLY65D, GLY81C, GLY81D, HIS50C, HIS50D, ILE106C, ILE106D, ILE117C, ILE117D, ILE119C, ILE119D, ILE56C, ILE56D, ILE85C, ILE85D, LEU49C, LEU49D, LEU6D, LEU93C, LEU93D, LEU98C, LEU98D, LEU99C, LEU99D, LYS45D, LYS58C, LYS58D, LYS71C, LYS71D, LYS90C, LYS90D, LYS94C, LYS94D, MET96C, MET96D, PHE29C, PHE29D, PHE64C, PHE64D, PHE66C, PHE66D, PHE72C, PHE72D, PHE79C, PHE79D, PHE84C, PHE84D, PRO48C, PRO48D, PRO62C, PRO62D, SER101C, SER101D, SER102C, SER102D, SER25C, SER25D, SER47C, SER47D, SER73C, SER73D, SER75C, SER75D, THR113C, THR113D, THR30C, THR30D, THR32C, THR32D, THR40D, THR52C, THR52D, THR55C, THR55D, THR63C, THR63D, THR67C, THR67D, THR76C, THR76D, THR77C, THR77D, THR80C, THR80D, THR95C, THR95D, TRP110C, TRP110D, TRP70C, TRP70D, TRP97C, TRP97D, VAL103C, VAL103D, VAL115C, VAL115D, VAL68C, VAL68D, VAL78C, VAL78D, VAL92C, VAL92D