3U60
structure of t4 bacteriophage clamp loader bound to open clamp, dna and atp analog
Total interactions analyzed 45
Total true interactions 21
Strongest Interaction Chains C-D
Int. Res. 209
Norm. En. per Res. -2.9842
Hub Node B(6)
Click on the Nodes or Edges in the network to see the details
Weak Strong
Width of edge <-> No. of inter. res.
All Interactions
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Chains Hydro. Bond Ener. (kJ/mol) Elec. Ener. (kJ/mol) VDW. Ener. (kJ/mol) Tot. Stab. Ener. (kJ/mol) #int. res. # Short cont. #Hydr. int. #VDW pairs #salt bridges #Pot. fav. elec. int #Pot. unfav. elec. int int. res.
B-C -2.3992 -124.9547 -473.351 -600.7049 231 60 13 21349 10 94 93
B-D 0.0 -8.7657 -8.9638 -17.7295 20 0 0 453 0 3 2
B-E 0.0 0.0 -4.5537 -4.5537 9 1 0 434 0 0 0
B-A -18.1642 19.677 -291.872 -290.3592 138 45 8 13112 2 32 29
B-G 0.0 -2.5859 -32.422 -35.0079 36 0 0 1753 0 12 13
B-F 0.0 0.3848 -55.3263 -54.9415 32 3 1 2250 0 4 6
C-D -16.364 -125.5357 -481.801 -623.7006 209 59 10 20738 11 88 80
C-E 0.0 0.0 -1.105 -1.105 8 0 0 183 0 0 0
C-A 0.0 0.0 -0.0399 -0.0399 3 0 0 13 0 3 4
C-G -18.2273 -0.8467 -111.757 -130.8311 70 16 6 5193 0 9 7
D-E -40.1024 -130.2745 -409.288 -579.6648 217 91 14 22047 12 89 80
D-A 0.0 0.0 -0.0453 -0.0453 3 0 0 21 0 0 0
D-G -11.5512 5.1874 -70.1746 -76.5384 40 21 4 3215 0 4 5
D-H -12.0454 -28.8498 -56.3951 -97.2904 46 7 0 2617 3 14 13
E-A -38.3922 -19.9165 -300.755 -359.0636 154 44 11 14411 4 42 36
E-H -35.8786 -2.6392 -64.4798 -102.9977 70 21 7 5233 0 12 9
A-H 0.0 32.2353 -78.0839 -45.8486 46 13 2 3524 0 12 6
A-F 0.0 -5.3515 -125.483 -130.8345 66 8 9 5769 3 7 6
G-H -14.4887 -8.2118 -97.3002 -120.0006 62 0 6 5246 0 16 12
G-F -17.8534 -11.6835 -91.991 -121.5279 57 12 6 5112 0 15 12
H-F 0.0 1.248 -1.5762 -0.3283 11 0 0 211 0 2 3